Mario Rodas
947c98310c
Merge pull request #160545 from collares/lean-3.39.2
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lean: 3.39.1 -> 3.39.2
2022-02-18 06:26:51 -05:00
R. Ryantm
b715fcd9d9
cwltool: 3.1.20220210171524 -> 3.1.20220217190813
2022-02-18 00:36:37 -05:00
Mauricio Collares
0c36a9cc35
lean: 3.39.1 -> 3.39.2
2022-02-17 23:42:05 -03:00
R. RyanTM
94f61e4c82
SPAdes: 3.15.3 -> 3.15.4
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(#158938 )
2022-02-18 00:55:34 +01:00
R. RyanTM
ac1c96ecec
colmap: 3.6 -> 3.7
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* colmap: 3.6 -> 3.7 (#159198 )
* colmap: license is BSD-3-Clause
Co-authored-by: Renaud <c0bw3b@users.noreply.github.com>
2022-02-18 00:29:14 +01:00
Ben Wolsieffer
1382f006a9
qgroundcontrol: 4.1.4 -> 4.2.0
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* qgroundcontrol: 4.1.4 -> 4.2.0 (#159291 )
QGroundControl now tries to download a prebuilt x86_64 .deb package for
the Airmap SDK, so we have to disable this feature. Previously, it was
disabled by default. I guess they were trying to make things easier for
users, but it seems pretty half-baked.
* qgroundcontrol: update homepage
The domain seems to have changed from .org to .com.
2022-02-18 00:09:39 +01:00
Daniel Wheeler
4befe7a89f
snakemake: 6.10.0 -> 6.15.5 ( #159026 )
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Fetch from GitHub rather than PyPI so tests are included.
2022-02-17 18:06:23 -05:00
ajs124
80160499bc
Merge pull request #160340 from helsinki-systems/tetgen
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tetgen: also install library and headers
2022-02-17 01:57:18 +01:00
Scriptkiddi
c8fb08b1e4
tetgen: also install library and headers
2022-02-17 01:37:28 +01:00
R. Ryantm
581628a7f4
qalculate-gtk: 3.22.0 -> 4.0.0
2022-02-16 19:33:07 +00:00
Florent C
762faa21a2
tlaps: 1.4.3 -> 1.4.5
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This updates tlaps to the most recent stable version and fixes the
template for the url from which the sources are fetched. Previously, the
tarball was fetched from the "current" remote directory from which old
versions are eventually removed. The package was therefore broken.
It also adds myself (florentc) as a maintainer.
2022-02-16 15:19:51 +01:00
Artturi
83dc7a2714
Merge pull request #159808 from r-ryantm/auto-update/tlaplus
2022-02-16 15:53:15 +02:00
Mauricio Collares
b38b641ff3
sageWithDoc: fix Sphinx warnings which break docgen
2022-02-15 22:37:34 -03:00
Ben Siraphob
521cfab34b
Merge pull request #157626 from siraben/formula-init
2022-02-15 18:38:41 -06:00
Sandro
5c5a8df724
Merge pull request #156420 from azuwis/transfig
2022-02-16 00:49:28 +01:00
7c6f434c
16fe911917
Merge pull request #160088 from r-ryantm/auto-update/jmol
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jmol: 14.32.6 -> 14.32.21
2022-02-15 21:39:00 +00:00
Kevin Cox
4e883afc5a
Merge pull request #159226 from lorenzleutgeb/gradle
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gradle: 7.3.3 -> 7.4
2022-02-15 15:26:18 -05:00
Ben Siraphob
7f94906083
formula: init at 2.0
2022-02-15 14:09:16 -06:00
Lorenz Leutgeb
f7e01145af
gradle: Update hashes of dependents for 7.4
2022-02-15 09:17:56 +01:00
Zhong Jianxin
507b23f0d1
chemtool: Set platforms to linux
2022-02-15 10:49:51 +08:00
R. Ryantm
099fefbceb
jmol: 14.32.6 -> 14.32.21
2022-02-15 02:42:04 +00:00
Zhong Jianxin
e8f3914985
treewide: Replace transfig with fig2dev
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Reasons:
- transfig never get upstream update since it was added to nixpkgs 2006,
according to [fig2dev Debian changelog][1], upstream maintainership
was taken over at 2016, and renamed to fig2dev.
- [Debian][2], [ArchLinux][3], [HomeBrew][4] all use fig2dev to replace
transfig.
- transfig builds [failed][5] on aarch64-darwin, fig2dev builds fine.
- One less package to maintain.
[1]: https://salsa.debian.org/debian/fig2dev/-/blob/debian/1%253.2.6_beta-1/debian/changelog
[2]: https://packages.debian.org/bullseye/transfig
[3]: https://archlinux.org/packages/community/x86_64/fig2dev/
[4]: https://formulae.brew.sh/formula/fig2dev
[5]: https://hydra.nixos.org/build/163404782/nixlog/2
2022-02-15 10:13:56 +08:00
7c6f434c
a6a1e14e52
Merge pull request #159741 from r-ryantm/auto-update/polymake
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polymake: 4.5 -> 4.6
2022-02-14 20:52:03 +00:00
7c6f434c
117fdae4b6
Merge pull request #159351 from collares/sage-ipython-8
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sage: don't test for Cython source code in tracebacks (temporarily)
2022-02-14 17:18:21 +00:00
Jan van Brügge
75f5b1f5b2
isabelle: Rebuild isabelle_setup.jar
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This jar contained a call to /usr/bin/env bash which was causing an
error during the build of the HOL session (which could be ignored) and
caused other errors during the development of https://github.com/NixOS/nixpkgs/pull/157515
(which could not be ignored). This commit patches the java sources to
call `bash` directly and rebuild the jar.
2022-02-14 15:17:58 +01:00
Bobby Rong
8617a5a336
Merge pull request #159645 from r-ryantm/auto-update/openhantek6022
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openhantek6022: 3.2.4 -> 3.2.5
2022-02-14 19:58:50 +08:00
R. Ryantm
e1f6e33d01
workcraft: 3.3.5 -> 3.3.6
2022-02-14 09:43:01 +00:00
R. Ryantm
240262f564
messer-slim: 3.7 -> 3.7.1
2022-02-14 00:46:29 +00:00
markuskowa
e7a2652f31
Merge pull request #159311 from r-ryantm/auto-update/gmsh
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gmsh: 4.9.2 -> 4.9.4
2022-02-13 11:48:17 +01:00
R. Ryantm
42d5cbb78e
tlaplus: 1.7.1 -> 1.7.2
2022-02-13 10:33:51 +00:00
R. Ryantm
2220d35562
bada-bib: 0.3.0 -> 0.4.1
2022-02-12 22:22:46 -08:00
R. Ryantm
24b505484b
cytoscape: 3.9.0 -> 3.9.1
2022-02-12 21:13:11 -08:00
R. Ryantm
ac4ec1ef75
gretl: 2021d -> 2022a
2022-02-12 21:08:09 -08:00
R. Ryantm
154d72f526
ginac: 1.8.1 -> 1.8.2
2022-02-12 20:56:29 -08:00
R. Ryantm
36800803c5
gama: 2.16 -> 2.17
2022-02-12 20:54:56 -08:00
R. Ryantm
0948b62a1f
polymake: 4.5 -> 4.6
2022-02-13 04:50:20 +00:00
R. Ryantm
aa982c28cf
kstars: 3.5.6 -> 3.5.7
2022-02-12 20:32:52 -08:00
Justin Bedő
2759d6f8d8
Merge pull request #159675 from r-ryantm/auto-update/picard-tools
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picard-tools: 2.26.9 -> 2.26.10
2022-02-13 09:53:20 +11:00
Justin Bedő
7ff9c00c4b
Merge pull request #159562 from r-ryantm/auto-update/mosdepth
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mosdepth: 0.3.2 -> 0.3.3
2022-02-13 09:27:54 +11:00
Justin Bedő
28f5937aeb
Merge pull request #159411 from r-ryantm/auto-update/last
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last: 1256 -> 1260
2022-02-13 09:25:49 +11:00
R. Ryantm
8a4946df2d
picard-tools: 2.26.9 -> 2.26.10
2022-02-12 22:20:29 +00:00
R. Ryantm
80175b54cc
openhantek6022: 3.2.4 -> 3.2.5
2022-02-12 20:37:00 +00:00
Robert Scott
83ea8999d4
gmsh: enable tests
2022-02-12 16:15:57 +00:00
Robert Scott
61dc066799
gmsh: enable for darwin
2022-02-12 16:13:53 +00:00
R. Ryantm
8bb7bc766f
mosdepth: 0.3.2 -> 0.3.3
2022-02-12 14:31:47 +00:00
Mario Rodas
0ff383436d
Merge pull request #159009 from r-ryantm/auto-update/bcal
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bcal: 2.3 -> 2.4
2022-02-12 08:39:47 -05:00
R. Ryantm
983beb2b8b
marvin: 21.20.0 -> 22.3.0
2022-02-12 12:52:40 +00:00
7c6f434c
bff729efd3
Merge pull request #158992 from collares/R-stackprotector
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R: disable stack protector on aarch64-darwin
2022-02-12 11:32:56 +00:00
Kim Lindberger
c7df3bf58c
Merge pull request #155108 from fedeinthemix/add-xyce-2
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Add Xyce 7.4 (second attempt)
2022-02-12 11:34:10 +01:00
Federico Beffa
10b7f30936
xyce,xyce-parallel: init at 7.4
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Co-authored-by: Sandro <sandro.jaeckel@gmail.com> and
Kim Lindberger <kim.lindberger@gmail.com>
2022-02-12 10:26:05 +01:00
R. Ryantm
6ca5bb6e20
last: 1256 -> 1260
2022-02-12 02:52:18 +00:00
Mauricio Collares
c763432549
sage: don't test for Cython source code in tracebacks (temporarily)
2022-02-11 19:13:34 -03:00
R. Ryantm
772c6b674c
gmsh: 4.9.2 -> 4.9.4
2022-02-11 18:31:28 +00:00
R. Ryantm
1631ffae8d
cwltool: 3.1.20220204090313 -> 3.1.20220210171524
2022-02-11 12:44:06 -05:00
evils
bb8a321187
kicad: 6.0.1 -> 6.0.2 ( #159132 )
2022-02-11 01:15:42 -05:00
Angus Trau
18592865d7
maintainers: update emilytrau
2022-02-11 04:45:03 +00:00
7c6f434c
06ff90f540
Merge pull request #159020 from collares/arb-2.22.1
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arb: 2.21.1 -> 2.22.1
2022-02-10 23:56:18 +00:00
R. RyanTM
b6869047c5
lepton-eda: 1.9.16-20210731 -> 1.9.17-20211219
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(#152772 )
2022-02-10 21:43:31 +01:00
R. Ryantm
288ba3f85b
scilab-bin: 6.0.2 -> 6.1.1
2022-02-10 11:56:08 -08:00
Mauricio Collares
b8c69782a2
sage: adapt tests to arb 2.22
2022-02-10 16:40:41 -03:00
R. Ryantm
fa133a26f3
rofi-calc: 2.0.0 -> 2.1.0
2022-02-10 11:32:09 -08:00
R. Ryantm
172ba8b474
bcal: 2.3 -> 2.4
2022-02-10 19:05:57 +00:00
Mauricio Collares
4536186f18
R: disable stack protector on aarch64-darwin
2022-02-10 14:01:08 -03:00
Mauricio Collares
58f58c8de6
lean: 3.39.0 -> 3.39.1
2022-02-08 12:24:19 -03:00
Ben Siraphob
3594565a7e
Merge pull request #156629 from siraben/coq-mainprogram
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coq: add meta.mainProgram
2022-02-06 21:43:01 +00:00
Ben Siraphob
6ad0e10dd3
coq: add meta.mainProgram
2022-02-06 15:42:47 -06:00
Ben Siraphob
33489310eb
Merge pull request #158358 from c0bw3b/fix/homepages
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A batch of homepage (and source) updates
2022-02-06 20:02:50 +00:00
Renaud
2ddcc2b369
hisat2: update homepage
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and use SPDX 3.0 license identifier
2022-02-06 15:10:53 +01:00
Renaud
d968838c90
gravit: update homepage and source URLs
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and use SPDX 3.0 license identifier
2022-02-06 15:10:47 +01:00
Renaud
3e5d286cc4
eagle7: update homepage
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www.cadsoftusa.com and www.cadsoft.de are gone
2022-02-06 15:10:29 +01:00
R. RyanTM
1bfc1730e1
cwltool: 3.1.20220202173120 -> 3.1.20220204090313 ( #158272 )
2022-02-05 15:14:21 -05:00
Sandro
63a6539b76
Merge pull request #157198 from afontaine/afontaine/correct-fah-shortcuts
2022-02-04 18:26:20 +01:00
R. Ryantm
af3af2df32
cwltool: 3.1.20220124184855 -> 3.1.20220202173120
2022-02-03 20:06:12 -05:00
Timo Kaufmann
0371c7ba56
Merge pull request #157981 from collares/sage-fonttools-revert
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sage: no longer assume fonttools emits deprecation warnings
2022-02-03 18:03:39 +01:00
Artturi
0f491bd7a3
Merge pull request #157264 from FliegendeWurst/disable-broken-parallel
2022-02-03 16:04:57 +02:00
Mauricio Collares
0ebdfab88b
lean: 3.38.0 -> 3.39.0
2022-02-03 09:21:20 -03:00
Mauricio Collares
778b1f8b4f
sage: no longer assume fonttools emits deprecation warnings
2022-02-03 08:28:22 -03:00
Bobby Rong
46a4949078
Merge pull request #157927 from r-ryantm/auto-update/vowpal-wabbit
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vowpal-wabbit: 8.11.0 -> 9.0.1
2022-02-03 17:28:02 +08:00
R. Ryantm
6d957f73ab
vowpal-wabbit: 8.11.0 -> 9.0.1
2022-02-03 02:08:33 +00:00
Сухарик
3f90b3a1e1
anders: init at 1.1.1
2022-02-02 12:31:53 +03:00
markuskowa
65bc2de0ef
Merge pull request #152447 from Cogitri/bada-bib
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bada-bib: init at 0.3.0
2022-02-01 22:26:26 +01:00
Martin Weinelt
778d148959
Merge pull request #155061 from piegamesde/gnome
2022-02-01 20:53:10 +01:00
Bruno Bzeznik
77682cf879
shtns: init at 3.5.1 ( #151061 )
2022-01-31 21:28:05 +01:00
R. Ryantm
d44e044d84
kallisto: 0.46.2 -> 0.48.0
2022-01-31 09:53:54 -08:00
Bruno Bzeznik
b6fa4975cf
repseek: init at 9Sep2014 ( #148017 )
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Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-01-31 14:59:32 +01:00
7c6f434c
9b76122d71
Merge pull request #140889 from collares/sage-9.5
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sage: 9.4 -> 9.5
2022-01-31 13:24:26 +00:00
Robert Schütz
a13fe11c59
sasview: 4.2.0 -> 5.0.4
2022-01-30 20:47:10 +00:00
Mauricio Collares
8ec9a32829
sageWithDoc: do not autodetect optional features when testing dochtml
2022-01-30 13:15:22 -03:00
Mauricio Collares
cecbb55fb0
sage: 9.4 -> 9.5
2022-01-30 13:15:20 -03:00
Sandro
a724f8dc29
Merge pull request #155897 from FliegendeWurst/key-2.10
2022-01-30 01:21:43 +01:00
piegames
9a2a3d0395
gfm: drop
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It does not appear to have an attribute that references it anymore?
(Not sure though, that name's hard to grep for)
2022-01-29 18:09:16 +01:00
piegames
5ffbf9ed81
tilp2: drop
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While tilp2's libglade dependency is optional, it still has a hard dependency
on it via gfm
2022-01-29 18:08:52 +01:00
markuskowa
01f1b41a7d
Merge pull request #156381 from r-ryantm/auto-update/bowtie2
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bowtie2: 2.4.4 -> 2.4.5
2022-01-29 14:56:23 +01:00
FliegendeWurst
a43431f376
alliance: disable parallel build
2022-01-29 11:40:09 +01:00
FliegendeWurst
48a133a066
key: add a desktop item
2022-01-29 10:14:54 +01:00
Vegard Strand Lende
41f927b433
verilator: 4.210 -> 4.218 ( #157122 )
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Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-01-29 02:30:41 +01:00
Andrew Fontaine
3c0680b783
fahviewer: fix variable substitution for shortcut
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Because single quotes are used in the sed command, the application
shortcut had the literal $out instead of the package path.
2022-01-28 16:47:24 -05:00
Andrew Fontaine
ba785adb28
fahcontrol: fix variable substitution for shortcut
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Because single quotes are used in the sed command, the application
shortcut had the literal $out instead of the package path.
2022-01-28 16:46:52 -05:00
Yipeng Sun
54cbee8d97
root: tweak wrapping flags for auxiliary programs, avoid forcing CMAKE_CXX_STANDARD ( #157069 )
2022-01-27 19:37:36 -05:00
Sandro
27cccd4e49
Merge pull request #151363 from Stunkymonkey/doc-updateWalker
2022-01-27 14:06:36 +01:00
