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angsd
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pkgs/applications: replace "${version}" with version
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2023-07-02 14:39:50 -04:00 |
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ants
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ants: update postInstall attribute
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2023-09-02 23:09:28 +02:00 |
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aragorn
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aragorn: fix format
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2023-06-08 18:42:29 +09:00 |
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astral
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bamtools
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bamtools: init at 2.5.2
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2023-08-18 00:17:15 +09:00 |
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bayescan
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bcftools
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bcftools: 1.17 -> 1.18
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2023-08-01 03:38:31 +00:00 |
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bedops
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bedops: fix build on darwin
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2023-04-24 22:11:47 +09:00 |
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bedtools
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bedtools: 2.30.0 -> 2.31.0
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2023-04-29 03:05:55 +00:00 |
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bftools
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blast
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blast: 2.13.0 -> 2.14.0
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2023-05-26 00:23:49 +00:00 |
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bowtie
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bowtie2
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bppsuite
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bppsuite: fix homepage
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2023-06-15 12:18:11 -04:00 |
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bwa
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bwa: add runHook
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2023-05-15 16:13:49 +09:00 |
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bwa-mem2
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bwa-mem2: init at version 2.2.1
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2023-08-23 15:02:06 -07:00 |
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cd-hit
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clustal-omega
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cmtk
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cmtk: fix format
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2023-07-11 17:50:47 +09:00 |
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conglomerate
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dcm2niix
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deeptools
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delly
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delly: enable openmp
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2023-07-14 00:20:20 +09:00 |
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diamond
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diamond: 2.1.7 -> 2.1.8
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2023-06-25 04:35:30 +00:00 |
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dssp
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dssp: 4.3.1 -> 4.4.2
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2023-07-23 21:24:23 +09:00 |
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ecopcr
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eggnog-mapper
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emboss
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est-sfs
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exonerate
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EZminc
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fastp
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fastp: 0.23.3 -> 0.23.4
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2023-06-04 03:21:21 +00:00 |
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febio-studio
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flywheel-cli
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freebayes
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gatk
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gatk: 4.3.0.0 -> 4.4.0.0
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2023-03-18 01:10:14 +00:00 |
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genmap
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hh-suite
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hh-suite: init at 3.3.0
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2023-04-19 10:32:35 +09:00 |
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hisat2
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hmmer
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igv
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igv: 2.16.0 -> 2.16.1
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2023-05-31 13:33:15 +00:00 |
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inormalize
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iqtree
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iqtree: 2.2.2.6 -> 2.2.2.7
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2023-08-25 12:25:13 +00:00 |
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itsx
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iv
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jbrowse
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jbrowse: init at 2.5.0
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2023-05-12 11:24:26 -07:00 |
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kalign
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kalign: init at 3.3.5
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2023-06-14 21:05:58 +09:00 |
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kallisto
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kallisto: 0.48.0 -> 0.50.0
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2023-07-09 17:19:43 +00:00 |
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kent
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kent: package headers too.
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2023-05-06 19:48:14 +02:00 |
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kssd
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last
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last: 1460 -> 1471
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2023-08-18 14:11:53 +10:00 |
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macs2
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macs2: 2.2.8 -> 2.2.9.1
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2023-08-11 14:45:45 -07:00 |
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macse
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mafft
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mafft: 7.515 -> 7.520
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2023-04-12 13:28:24 +09:00 |
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manta
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megahit
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meme-suite
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messer-slim
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migrate
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minc-tools
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minc-widgets
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minia
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minimap2
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minimap2: 2.25 -> 2.26
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2023-05-03 19:38:48 +00:00 |
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mmseqs2
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mni_autoreg
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mosdepth
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mosdepth: build with Nim-2
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2023-08-21 07:32:46 +01:00 |
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mrbayes
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mrtrix
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mrtrix: unstable-2021-11-25 -> 3.0.4
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2023-09-06 12:11:38 -04:00 |
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muscle
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treewide: noop: refer to src.name or similar in sourceRoot where appropriate, part 1: trivial cases
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2023-08-03 16:32:03 +00:00 |
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N3
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nest
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nest-mpi: 3.4 -> 3.5
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2023-07-08 16:03:30 +00:00 |
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neuron
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niftyreg
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niftyseg
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obitools
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octopus
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various packages: pin boost179
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2023-07-22 16:54:22 +02:00 |
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paml
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paml: refactor
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2023-07-14 15:08:14 +09:00 |
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picard-tools
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picard-tools: 3.0.0 -> 3.1.0
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2023-08-02 22:03:03 +00:00 |
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platypus
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plink-ng
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poretools
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prodigal
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quast
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raxml
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repseek
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sambamba
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sambamba: 1.0.0 -> 1.0.1
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2023-08-25 06:20:00 +00:00 |
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samblaster
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samtools
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samtools: 1.17 -> 1.18
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2023-08-07 01:22:06 +00:00 |
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seaview
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seqkit
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seqkit: 2.5.0 -> 2.5.1
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2023-08-10 04:42:38 +00:00 |
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seqtk
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seqtk: 1.3 -> 1.4
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2023-05-28 06:48:51 +00:00 |
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snpeff
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somatic-sniper
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sortmerna
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spades
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sratoolkit
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treewide: remove unneeded dots and slashes in sourceRoots
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2023-08-12 08:29:56 +00:00 |
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stacks
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star
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treewide: noop: refer to src.name or similar in sourceRoot where appropriate, part 1: trivial cases
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2023-08-03 16:32:03 +00:00 |
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strelka
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subread
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subread: 2.0.5 -> 2.0.6
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2023-05-10 22:30:35 +10:00 |
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sumatools
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svaba
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tandem-aligner
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treewide: noop: refer to src.name or similar in sourceRoot where appropriate, part 1: trivial cases
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2023-08-03 16:32:03 +00:00 |
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tebreak
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treemix
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trf
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trf: init at 4.09.1
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2023-03-19 22:25:42 +09:00 |
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trimal
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truvari
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truvari: add patches to fix truvari anno
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2023-05-15 10:01:38 +09:00 |
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varscan
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varscan: 2.4.5 -> 2.4.6
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2023-04-05 14:55:31 +00:00 |
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vcftools
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veryfasttree
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veryfasttree: use finalAttrs pattern
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2023-08-02 18:51:11 +02:00 |
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whisper
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xenomapper
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