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563,170 Commits 176 Branches 125 Tags 7.5 GiB
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Commit Graph

8663 Commits

Author SHA1 Message Date
Doron Behar
a90c911ba6
Revert "gwyddion: mark as broken" 2023-12-25 14:19:34 +00:00
Markus Kowalewski
2058c3a373 lammps: fix homepage and license 2023-12-24 23:05:00 +01:00
Fabián Heredia Montiel
8f080df5b7
Merge pull request #276231 from r-ryantm/auto-update/samtools 
samtools: 1.18 -> 1.19
 2023-12-24 01:50:02 -06:00
Nick Cao
c66be39e13
Merge pull request #276240 from r-ryantm/auto-update/seqkit 
seqkit: 2.6.0 -> 2.6.1
 2023-12-23 10:53:39 -05:00
Nick Cao
e5e39db8d3
Merge pull request #276190 from r-ryantm/auto-update/qtrvsim 
qtrvsim: 0.9.5 -> 0.9.6
 2023-12-23 10:47:30 -05:00
Andreas Rammhold
d7821df52c
Merge pull request #275710 from andir/xflr5-fetchsvn 
xflr5: use fetchsvn instead of fetchzip
 2023-12-23 13:43:36 +01:00
R. Ryantm
02ddd820f8 seqkit: 2.6.0 -> 2.6.1 2023-12-23 08:17:11 +00:00
R. Ryantm
d4211ea181 samtools: 1.18 -> 1.19 2023-12-23 06:46:26 +00:00
R. Ryantm
541e9020e9 qtrvsim: 0.9.5 -> 0.9.6 2023-12-23 03:21:44 +00:00
R. Ryantm
5098005a85 lean4: 4.3.0 -> 4.4.0 2023-12-22 06:12:02 +00:00
OTABI Tomoya
9db0d0a0ec
Merge pull request #274810 from r-ryantm/auto-update/messer-slim 
messer-slim: 4.0.1 -> 4.1
 2023-12-21 10:58:25 +09:00
Guillaume Maudoux
26241b6458
Merge pull request #274496 from whonore/update-dafny-4.4.0 
dafny: 4.3.0 -> 4.4.0
 2023-12-20 23:29:29 +01:00
Andreas Rammhold
9eb6350536 xflr5: use fetchsvn instead of fetchzip 
The Sourceforge ZIP URLs aren't stable. They (sometimes?) disappear
and throw 404. Probably until someone requests the file to be
generated from the UI. This made the build of xflr5 fail. By using the
SVN checkout we should be on the safer side.
 2023-12-20 20:04:46 +01:00
Vincent Laporte
b0d34692a2
Merge pull request #275608 from proux01/coq_8_19 
coq_8_19: init at 8.19+rc1
 2023-12-20 11:06:56 +01:00
Justin Bedő
7dcf6462dd
Merge pull request #275350 from r-ryantm/auto-update/last 
last: 1518 -> 1519
 2023-12-20 10:04:19 +11:00
Pierre Roux
d77d8f69f7 coq_8_19: init at 8.19+rc1 2023-12-19 14:41:20 +01:00
R. Ryantm
0ecf097e92 last: 1518 -> 1519 2023-12-19 07:59:25 +00:00
OTABI Tomoya
bda147b4f6
Merge pull request #273915 from r-ryantm/auto-update/bcftools 
bcftools: 1.18 -> 1.19
 2023-12-19 15:57:58 +09:00
OTABI Tomoya
b04bd65c5b
Merge pull request #274736 from r-ryantm/auto-update/magic-vlsi 
magic-vlsi: 8.3.449 -> 8.3.453
 2023-12-19 15:51:26 +09:00
Emily
17e365438e
Merge pull request #274363 from r-ryantm/auto-update/gatk 
gatk: 4.4.0.0 -> 4.5.0.0
 2023-12-18 18:46:35 +01:00
Vincent Laporte
1791eeb7bd cgal: default to version 5 2023-12-18 18:18:00 +01:00
Phillip Seeber
1d2d308e2e avogadro2: 1.97.0 -> 1.98.1 2023-12-18 14:21:12 +01:00
R. Ryantm
8a034b1227 nnpdf: 4.0.6 -> 4.0.7 2023-12-18 04:59:18 -05:00
Doron Behar
b4f9bed389
Merge pull request #274646 from r-ryantm/auto-update/lammps-mpi 
lammps-mpi: 2Aug2023_update1 -> 2Aug2023_update2
 2023-12-18 08:49:41 +00:00
Peder Bergebakken Sundt
13d052ddce
Merge pull request #272697 from fedeinthemix/wip-xyce-7.7 
xyce: 7.6.0 -> 7.7.0
 2023-12-17 21:55:30 +01:00
Weijia Wang
050c97ef96
Merge pull request #273352 from wegank/dl-poly-gcc 
dl-poly-classic-mpi: fix build with gcc 11+
 2023-12-17 19:17:39 +01:00
Federico Beffa
344d4e77da xyce: 7.6.0 -> 7.7.0 2023-12-17 18:48:06 +01:00
Samuel Ainsworth
701617bf45
Merge pull request #274699 from tmplt/feat/mujoco-3.1.0 
mujoco: 3.0.1 -> 3.1.0
 2023-12-17 12:14:06 -05:00
Weijia Wang
2a3d4f9afe alt-ergo: fix build on darwin 2023-12-17 16:12:48 +01:00
R. Ryantm
232b3c6fb6 jmol: 16.1.45 -> 16.1.47 2023-12-17 16:11:46 +01:00
Nick Cao
d319012df5
Merge pull request #274921 from r-ryantm/auto-update/nvc 
nvc: 1.11.0 -> 1.11.1
 2023-12-17 10:10:04 -05:00
Dmitry Kalinkin
d245890087
root: 6.28.10 -> 6.30.02 (#274348) 2023-12-17 05:20:40 -05:00
R. Ryantm
4af519af84 nvc: 1.11.0 -> 1.11.1 2023-12-17 07:23:15 +00:00
R. Ryantm
dfa0eb5286 messer-slim: 4.0.1 -> 4.1 2023-12-16 20:13:33 +00:00
R. Ryantm
e5f5f16f4b magic-vlsi: 8.3.449 -> 8.3.453 2023-12-16 14:26:08 +00:00
Viktor Sonesten
b5aa9eaa9c mujoco: 3.0.1 -> 3.1.0 2023-12-16 11:30:45 +01:00
R. Ryantm
bebc9fc5db lammps-mpi: 2Aug2023_update1 -> 2Aug2023_update2 2023-12-16 06:40:55 +00:00
whonore
9e1d149f05 dafny: 4.3.0 -> 4.4.0 2023-12-15 15:48:44 -05:00
Nick Cao
4d9f672c6c
Merge pull request #274370 from r-ryantm/auto-update/cadical 
cadical: 1.9.0 -> 1.9.1
 2023-12-15 10:11:20 -05:00
Dmitry Kalinkin
d4af6e420f
root: build with root7 and webgui (#272723) 2023-12-15 08:43:44 -05:00
R. Ryantm
a1e9171ca3 cadical: 1.9.0 -> 1.9.1 2023-12-15 05:27:39 +00:00
R. Ryantm
c618d890bc gatk: 4.4.0.0 -> 4.5.0.0 2023-12-15 04:20:42 +00:00
R. Ryantm
a365120b26 eigenmath: unstable-2023-12-11 -> unstable-2023-12-12 2023-12-14 13:59:07 +00:00
R. Ryantm
bb215123da bcftools: 1.18 -> 1.19 2023-12-13 06:48:21 +00:00
Dmitry Kalinkin
1a5412e140
toil: 5.7.1 -> 5.12.0 (#273274) 2023-12-12 16:04:33 -05:00
Weijia Wang
9a67c36f6d
Merge pull request #273382 from wegank/strelka-aarch64 
strelka: add aarch64-linux support
 2023-12-12 01:51:59 +01:00
OTABI Tomoya
bea3c001fd
Merge pull request #273485 from r-ryantm/auto-update/kalign 
kalign: 3.3.5 -> 3.4.0
 2023-12-12 08:56:04 +09:00
Nick Cao
7c71bd5224
Merge pull request #273629 from r-ryantm/auto-update/eigenmath 
eigenmath: unstable-2023-11-17 -> unstable-2023-12-11
 2023-12-11 17:57:54 -05:00
R. Ryantm
35c04706b1 eigenmath: unstable-2023-11-17 -> unstable-2023-12-11 2023-12-11 20:20:25 +00:00
Weijia Wang
bf4d34ba62 dl-poly-classic-mpi: fix build with gcc 11+ 2023-12-11 19:01:06 +01:00