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Commit Graph

42 Commits

Author SHA1 Message Date
Sandro Jäckel
2e9c330216
pythonPackages: deprecate pytest_xdist alias 2021-07-21 13:32:52 +02:00
Sandro Jäckel
4209fed914
pythonPackages: deprecate pytestcov alias 2021-07-21 13:32:17 +02:00
Robert Schütz
1ec5651913 treewide: use pythonPackages.python-dateutil instead of pythonPackages.dateutil 2021-07-03 13:45:57 +02:00
Martin Weinelt
ffea0db4c5 python3Packages.nipype: 1.6.0 -> 1.6.1 2021-06-22 13:42:34 +02:00
Profpatsch
4a7f99d55d treewide: with stdenv.lib; in meta -> with lib; 
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
 2021-01-11 10:38:22 +01:00
R. RyanTM
caa1e8e12f python37Packages.nipype: 1.5.1 -> 1.6.0 2020-11-30 12:27:20 +00:00
Ben Darwin
f31be2ec25 python3Packages.nipype: avoid use of neurdflib by default since it causes a package collision when rdflib is in the closure 2020-10-07 14:02:26 -04:00
Ben Darwin
921b15efe7 python3Packages.nipype: remove Python 2 support (dependency nibabel already unsupported) 2020-10-07 13:49:17 -04:00
Frederik Rietdijk
481c8de7bd python3Packages.nipype: 1.5.0 -> 1.5.1 2020-08-29 10:23:39 -07:00
Frederik Rietdijk
2030083457 python: nipype: 1.4.2 -> 1.5.0 2020-06-11 10:00:02 +02:00
Jonathan Ringer
83f5fd8958 python3Packages.nipype: 1.3.1 -> 1.4.2, enable python3.8 2020-05-04 21:41:05 -07:00
Michael Reilly
84cf00f980
treewide: Per RFC45, remove all unquoted URLs 2020-04-10 17:54:53 +01:00
Ben Darwin
92763dd8f1 python3Packages.nitime: quote homepage URL 2020-04-09 10:45:09 -04:00
Jonathan Ringer
1abea42347 python38Packages.nipype: mark broken 
Tests on python3.8 hang for several hours, blocking reviews
of other packages.
 2020-02-14 10:55:51 -08:00
Frederik Rietdijk
7759b54df3 python: nipype: 1.2.3 -> 1.3.1 2019-12-30 16:46:44 +01:00
Robin Gloster
318e1ee4ab
treewide: structured-attrs fixes 2019-12-30 04:50:38 +01:00
Frederik Rietdijk
7aedd744d8 Merge master into staging-next 2019-12-16 20:28:10 +01:00
Jonathan Ringer
a5097e915d python3Packages.nipype: fix build, add missing dependencies 2019-12-15 19:18:13 -08:00
Frederik Rietdijk
cc0719f466 python: neurdflib: 5.0.0.post1 -> 5.0.1 2019-12-15 16:23:15 +01:00
Frederik Rietdijk
eeb0767ea2 python: nipype: 1.2.0 -> 1.2.3 2019-10-18 09:53:59 +02:00
Jonathan Ringer
f40a1ef0cc pythonPackages.nipype: 1.1.9 -> 1.2.0 2019-08-18 11:48:40 +02:00
Matthew Bauer
84d00355e8 Merge remote-tracking branch 'NixOS/master' into staging 2019-04-23 22:00:42 -04:00
Daniel Schaefer
bac4d95aa2 treewide: Change URLs to HTTPS 
Lots of URLs were HTTP redirect to HTTPS. Changed those and checked them
if there's actual content. Inspired by
https://github.com/NixOS/nixpkgs/issues/60004
 2019-04-22 10:19:54 +02:00
Frederik Rietdijk
ed7b70b102 python: nipype: 1.1.8 -> 1.1.9 2019-04-18 12:42:41 +02:00
Frederik Rietdijk
e6efedbbdc python: nipype: 1.1.7 -> 1.1.8 2019-02-17 14:40:29 +01:00
worldofpeace
9619e6a7f6 pythonPackages.nipype: 1.1.5 -> 1.1.7 
Fix build by dropping a patch for an issue that is already fixed.
See: https://github.com/nipy/nipype/pull/2701

Also had to disable tests.
See: https://github.com/nipy/nipype/issues/2839
 2019-01-10 20:10:51 -05:00
Frederik Rietdijk
33b6b7c93c python: nipype: 1.1.4 -> 1.1.5 2018-12-03 16:50:38 +01:00
Frederik Rietdijk
a11b94e7e4 python: nipype: 1.1.3 -> 1.1.4 2018-12-03 16:50:32 +01:00
Frederik Rietdijk
1355a82c7f python: nipype: 1.1.2 -> 1.1.3 2018-10-13 09:50:16 +02:00
Ashley Gillman
12c0dd5432 python.pkgs.nipype: Futures is python 2 only. Also fix building. 2018-09-05 22:26:34 +01:00
Frederik Rietdijk
0c0e408db9 python: nipype: 1.1.0 -> 1.1.2 2018-08-25 07:38:22 +02:00
Frederik Rietdijk
ac21188b6e python.pkgs.nipype: add missing dependency 2018-07-26 12:43:19 +02:00
Frederik Rietdijk
6cb00d57ac python: nipype: 1.0.4 -> 1.1.0 2018-07-22 16:52:46 +02:00
Frederik Rietdijk
13cdf3ecd2 python: nipype: 1.0.3 -> 1.0.4 2018-06-22 13:09:22 +02:00
Frederik Rietdijk
82333e0e23 python: nipype: 1.0.2 -> 1.0.3 2018-05-10 10:09:14 +02:00
Frederik Rietdijk
60e656c692 python: nipype: 1.0.1 -> 1.0.2 2018-04-08 11:34:55 +02:00
Robert Schütz
ee1896d63d pythonPackages.nipype: enable tests 2018-03-31 20:43:32 +02:00
Maximilian Bosch
db0fa06fce
pythonPackage.nipype: fix build 
`pythonPackages.prov` has been bumped to `1.5.2`, however `nipype`
pinned `prov` to `1.5.0`. Patching `nipype/info.py` fixes this issue by
bumping to the current `prov` version in nixpkgs.

See https://hydra.nixos.org/build/71817962/log
See ticket #36453
 2018-03-30 18:45:04 +02:00
Frederik Rietdijk
a8e3ffc789 python: nipype: 1.0.0 -> 1.0.1 2018-03-03 11:58:46 +01:00
Frederik Rietdijk
7cb173ebc5 python: nipype: 0.14.0 -> 1.0.0 2018-02-03 17:43:30 +01:00
Ashley Gillman
100bf5ae98 pythonPackages.{nibabel,nipype,prov,pydotplus,xvfbwrapper}: Remove name 2018-01-20 11:32:55 +01:00
Ashley Gillman
c1eeedaf4a pythonPackages.nipype: To separate file. 2018-01-20 11:32:54 +01:00