Commit Graph

1127 Commits

Author SHA1 Message Date
Silvan Mosberger
4f0dadbf38 treewide: format all inactive Nix files
After final improvements to the official formatter implementation,
this commit now performs the first treewide reformat of Nix files using it.
This is part of the implementation of RFC 166.

Only "inactive" files are reformatted, meaning only files that
aren't being touched by any PR with activity in the past 2 months.
This is to avoid conflicts for PRs that might soon be merged.
Later we can do a full treewide reformat to get the rest,
which should not cause as many conflicts.

A CI check has already been running for some time to ensure that new and
already-formatted files are formatted, so the files being reformatted here
should also stay formatted.

This commit was automatically created and can be verified using

    nix-build a08b3a4d19.tar.gz \
      --argstr baseRev b32a094368
    result/bin/apply-formatting $NIXPKGS_PATH
2024-12-10 20:26:33 +01:00
Stephen Huan
51383099e7
rPackages.Rhdf5lib: remove hdf5_1_10 override 2024-11-26 23:50:05 -08:00
Justin Bedő
3dfb4fec58
rPackages.bgx: fix build (#353620) 2024-11-19 07:13:33 +11:00
Bruno Rodrigues
9543eeea3a rPackages.rJava: fixed build on Darwin 2024-11-14 18:50:52 +00:00
Justin Bedő
a56d8a9a8a
rPackages.gdtools: fix build on darwin (#355272) 2024-11-14 11:28:30 +11:00
Bruno Rodrigues
135f034db4 rPackages.gdtools: fix build on darwin 2024-11-11 21:41:46 +01:00
Bruno Rodrigues
4a81099da9 rPackages.lwgeom: fixed build on darwin 2024-11-10 13:16:59 +01:00
Justin Bedő
809c4181b0
rPackages.timeless: fixed build (#353706) 2024-11-07 07:15:38 +11:00
Justin Bedő
3ac8826709
rPackages.mcrPioda: fixed build (#353819) 2024-11-07 07:15:03 +11:00
Justin Bedő
82a336952f
rPackages.OpenCL: fix build (#353790) 2024-11-07 07:14:37 +11:00
Justin Bedő
8f3de45dec
rPackages.ravetools: fixed build (#353708) 2024-11-07 07:14:11 +11:00
Justin Bedő
ee2b6d3b77
rPackages.resultant: fix build (#353625) 2024-11-07 07:13:47 +11:00
Aleksana
90d75026d4
rPackages.scorematchingad: fix build (#353705) 2024-11-06 21:54:24 +08:00
Bruno Rodrigues
62a8179390 rPackages.mcrPioda: fixed build 2024-11-05 13:45:56 +01:00
Bruno Rodrigues
c8b3472f1c rPackages.OpenCL: fix build 2024-11-05 11:38:49 +01:00
Bruno Rodrigues
3cd91c00ba rPackages.ravetools: fixed build 2024-11-04 21:37:27 +01:00
Bruno Rodrigues
c4c7d04010 rPackages.timeless: fixed build 2024-11-04 21:32:25 +01:00
Bruno Rodrigues
6d0030ad09 rPackages.scorematchingad: fixed build 2024-11-04 21:28:14 +01:00
Bruno Rodrigues
1c37a2492c rPackages.resultant: fix build 2024-11-04 11:31:33 +01:00
Bruno Rodrigues
179f1365e0 rPackages.bgx: fix build 2024-11-04 11:04:39 +01:00
Bruno Rodrigues
4f8bbed6ca rPackages.alcyon: fix build 2024-11-04 08:40:14 +01:00
Justin Bedő
7eee04bbcc
rPackages.ChemmineOB: fix compile error (#351013) 2024-11-01 09:59:25 +11:00
László Kupcsik
069077c379 rPackages.ChemmineOB: fix compile error
- Don't override openbabel
- fix pointer name in ChemmineOB src instead
2024-10-29 21:40:38 +01:00
K900
f21f4ca3ee Merge remote-tracking branch 'origin/master' into staging-next 2024-10-26 21:05:47 +03:00
Francesco Gazzetta
68576df997 treewide: move tcl libraries under tclPackages 2024-10-26 16:23:15 +00:00
github-actions[bot]
0c3802422c
Merge master into staging-next 2024-10-16 06:04:54 +00:00
Andrew Marshall
631dbc6830 rPackages.ragg: 1.3.2 -> 1.3.3
Fixes build that is currently failing with

> error: invalid conversion from 'unsigned char*' to 'char*'

See also https://github.com/r-lib/ragg/issues/170
2024-10-15 19:25:31 -04:00
github-actions[bot]
9f6509c682
Merge staging-next into staging 2024-10-12 00:14:07 +00:00
oxalica
899a790d80 jq: merge output "lib" into "out" 2024-09-30 02:45:37 -04:00
Bruno Rodrigues
3b2590eee2 rPackages.vapour: fix build on darwin 2024-09-25 20:33:35 +02:00
Bruno Rodrigues
39fd7e26f0 rPackages.terra: fix build on darwin 2024-09-25 20:33:18 +02:00
Bruno Rodrigues
9eef14c678 rPackages.sf: fix build on darwin 2024-09-25 20:33:02 +02:00
Artturin
e0464e4788 treewide: replace stdenv.is with stdenv.hostPlatform.is
In preparation for the deprecation of `stdenv.isX`.

These shorthands are not conducive to cross-compilation because they
hide the platforms.

Darwin might get cross-compilation for which the continued usage of `stdenv.isDarwin` will get in the way

One example of why this is bad and especially affects compiler packages
https://www.github.com/NixOS/nixpkgs/pull/343059

There are too many files to go through manually but a treewide should
get users thinking when they see a `hostPlatform.isX` in a place where it
doesn't make sense.

```
fd --type f "\.nix" | xargs sd --fixed-strings "stdenv.is" "stdenv.hostPlatform.is"
fd --type f "\.nix" | xargs sd --fixed-strings "stdenv'.is" "stdenv'.hostPlatform.is"
fd --type f "\.nix" | xargs sd --fixed-strings "clangStdenv.is" "clangStdenv.hostPlatform.is"
fd --type f "\.nix" | xargs sd --fixed-strings "gccStdenv.is" "gccStdenv.hostPlatform.is"
fd --type f "\.nix" | xargs sd --fixed-strings "stdenvNoCC.is" "stdenvNoCC.hostPlatform.is"
fd --type f "\.nix" | xargs sd --fixed-strings "inherit (stdenv) is" "inherit (stdenv.hostPlatform) is"
fd --type f "\.nix" | xargs sd --fixed-strings "buildStdenv.is" "buildStdenv.hostPlatform.is"
fd --type f "\.nix" | xargs sd --fixed-strings "effectiveStdenv.is" "effectiveStdenv.hostPlatform.is"
fd --type f "\.nix" | xargs sd --fixed-strings "originalStdenv.is" "originalStdenv.hostPlatform.is"
```
2024-09-25 00:04:37 +03:00
detroyejr
b1c36d2639 rPackages.RPostgres: add postgresql to nativeBuildInputs 2024-09-11 12:21:41 -04:00
László Kupcsik
22b60727f1 quantlib: 1.34-1.35 2024-09-05 22:22:59 +02:00
Justin Bedő
680fd54e16
rPackages: CRAN and BioC update (#335717) 2024-09-02 12:23:39 +10:00
Philip Taron
ae92f312bf
treewide: use a consistent meta.priority default 2024-08-29 09:04:57 -07:00
Justin Bedo
d3401fc7de
Merge remote-tracking branch 'origin/master' into r-updates 2024-08-24 07:58:25 +10:00
Justin Bedo
ae09f9d3c3
rPackages.rlas: fix build 2024-08-24 07:54:32 +10:00
Justin Bedo
13dc2d792d
rPackages: CRAN and BioC update 2024-08-19 12:01:54 +10:00
Alan Groot
10c46625fe rPackages.DGP4LCF: add dependencies 2024-08-13 13:56:37 +02:00
Justin Bedő
b1953b001e
Merge pull request #328272 from TomaSajt/r-packages-migrate-to-json
rPackages: migrate code generation to use JSON
2024-08-13 15:06:02 +10:00
TomaSajt
e352a923ef
rPackages: refactor code generation to output JSON 2024-08-03 13:47:20 +02:00
TomaSajt
d0dd8b9ff2
rPackages: migrate generated code to JSON 2024-07-31 18:28:37 +02:00
Martin Weinelt
93f4195fe0
Merge remote-tracking branch 'origin/master' into staging-next
Conflicts:
- pkgs/applications/graphics/seamly2d/default.nix
2024-07-26 18:05:04 +02:00
Sigmanificient
6dd44107ac treewide: remove unused lib (and other) arguments 2024-07-26 11:18:09 +02:00
Randy Eckenrode
f9b7f4ec09
tree-wide: use top-level cctools 2024-07-17 22:36:19 -04:00
Emily
8696744ce9 treewide: clean up uses of lib{GL,GLU,glut}.dev
These were now broken on Darwin; most of them were unnecessary,
but best practice for the remaining ones is to use `lib.getDev`.
2024-06-22 18:06:51 +01:00
Justin Bedő
e7d6f2fd25
Merge pull request #315015 from NixOS/r-updates
rPackages, R: R 4.3.3 -> 4.4.1 and bump rPackages
2024-06-20 16:48:18 +10:00
Justin Bedő
6f3340bf0f
Merge pull request #317033 from Kupac/fix_covidsymptom
rPackages.covidsymptom: fix build
2024-06-20 15:23:28 +10:00