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rPackages: migrate generated code to JSON

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TomaSajt 2024-07-19 00:36:44 +02:00
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pkgs/development/r-modules/bioc-experiment-packages.nix generated
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@ -1,459 +0,0 @@
# This file is generated from generate-r-packages.R. DO NOT EDIT.
# Execute the following command to update the file.
#
# Rscript generate-r-packages.R bioc-experiment >new && mv new bioc-experiment-packages.nix
{ self, derive }:
let derive2 = derive { biocVersion = "3.19"; };
in with self; {
ALL = derive2 { name="ALL"; version="1.46.0"; sha256="1yl8b8q8i19kx4viwinhyq9xn9d4axlfgjvm7cpf7pys4krhnrha"; depends=[Biobase]; };
ALLMLL = derive2 { name="ALLMLL"; version="1.44.0"; sha256="0pmdw42wrmhqm3754s3kkz7wjih63h21zlrwl1b7lkli79vbzkpd"; depends=[affy]; };
ARRmData = derive2 { name="ARRmData"; version="1.40.0"; sha256="02y44d0dappc3srl2d7lgipm6a62gvd8vivzaq4594dnmy8rvkw3"; depends=[]; };
ASICSdata = derive2 { name="ASICSdata"; version="1.24.0"; sha256="03wlk2x9bz5xjhnfgxl5zdagnwm60f23bz1qhlgqfs94zfay0jrq"; depends=[]; };
Affyhgu133A2Expr = derive2 { name="Affyhgu133A2Expr"; version="1.40.0"; sha256="0l55wr09j2p8dkzx8cas2whf404anf477h2bmpv267mglrs1sp32"; depends=[]; };
Affyhgu133Plus2Expr = derive2 { name="Affyhgu133Plus2Expr"; version="1.38.0"; sha256="04cxyjk1dhal8iapfilzck8kxpw8jvswxxb7fhnbxqghwlhjg617"; depends=[]; };
Affyhgu133aExpr = derive2 { name="Affyhgu133aExpr"; version="1.42.0"; sha256="047yza31rrdmzjbg6chqrz61fh7j1a013fww5nj1nwp60rd6iln1"; depends=[]; };
AffymetrixDataTestFiles = derive2 { name="AffymetrixDataTestFiles"; version="0.42.0"; sha256="1ijprvhbhq68v2g8z9yqwwqw2lz4f4a2pa7lnq2vhf54p9s96sn1"; depends=[]; };
Affymoe4302Expr = derive2 { name="Affymoe4302Expr"; version="1.42.0"; sha256="11n5mx1m21j6cc4qrwzrxj3749zc42b1ivwnp47cf55h6j2c3rgm"; depends=[]; };
AmpAffyExample = derive2 { name="AmpAffyExample"; version="1.44.0"; sha256="0j5alica5z8fzcwiva3dg1wmncwwkchb7avwvhszk7p7ym0s983q"; depends=[affy]; };
AneuFinderData = derive2 { name="AneuFinderData"; version="1.32.0"; sha256="1qysi874hsa4a7xz0na0cxv0sx02d3b74h77s30mfww1wsg8jy69"; depends=[]; };
AshkenazimSonChr21 = derive2 { name="AshkenazimSonChr21"; version="1.34.0"; sha256="0bm2f7pnxibgcsi5kghjzmin01sirprym5i94qsiga7c6dknqgmn"; depends=[]; };
AssessORFData = derive2 { name="AssessORFData"; version="1.21.0"; sha256="10rbwdcjqfhq9ramrzfxd3bl2q2nqminsj3pigid6fmvyg0ykfhk"; depends=[DECIPHER]; };
BeadArrayUseCases = derive2 { name="BeadArrayUseCases"; version="1.42.0"; sha256="1s62vqvl3zxf97syp5lymacah594m8szk23skl4bk88jkzkkx6a5"; depends=[beadarray GEOquery limma]; };
BeadSorted_Saliva_EPIC = derive2 { name="BeadSorted.Saliva.EPIC"; version="1.12.0"; sha256="1pjnamvgx9w3g40j82rbdysbarx11gm8k6lb3vhkgb2nxv1vij84"; depends=[ExperimentHub minfi]; };
BioImageDbs = derive2 { name="BioImageDbs"; version="1.12.0"; sha256="1cs6c80h34xbzpsgrpy5aj1f0nlxmy713jj1q5g156z5kiz3mzwc"; depends=[animation AnnotationHub EBImage einsum ExperimentHub filesstrings magick magrittr markdown rmarkdown]; };
BioPlex = derive2 { name="BioPlex"; version="1.10.0"; sha256="1bkakf7yi1lhwc48pmwifk7qdnc9hzaqnlcni7sy0ypwgb1mfsh7"; depends=[BiocFileCache GenomeInfoDb GenomicRanges GEOquery graph SummarizedExperiment]; };
BloodCancerMultiOmics2017 = derive2 { name="BloodCancerMultiOmics2017"; version="1.24.0"; sha256="16c6nirflpj0zf2wrj0hb5xcq2168si95np3sm76r3kvwlr48zm7"; depends=[beeswarm Biobase DESeq2 devtools dplyr ggdendro ggplot2 glmnet gtable ipflasso RColorBrewer reshape2 scales SummarizedExperiment survival tibble]; };
CCl4 = derive2 { name="CCl4"; version="1.42.0"; sha256="0n3kx176if48gmw3qd5knlv5q7v7738c54ix8cwr2xhsqc7ah800"; depends=[Biobase limma]; };
CLL = derive2 { name="CLL"; version="1.44.0"; sha256="18bjaqf6cjvjfcp80b5zmb48qbywacqs6aiarsh6ksq2yj4np4zs"; depends=[affy Biobase]; };
CLLmethylation = derive2 { name="CLLmethylation"; version="1.24.0"; sha256="0pafgk4sagyrsddzg5a0nigs518ki2rikhkj02mngh9x4kipkhip"; depends=[ExperimentHub SummarizedExperiment]; };
COHCAPanno = derive2 { name="COHCAPanno"; version="1.40.0"; sha256="0gdb08vxna4rhf5lyhjr9prww58sikjiv49i4sy6hgj5a1chz288"; depends=[]; };
CONFESSdata = derive2 { name="CONFESSdata"; version="1.32.0"; sha256="0xmbgr6iq4nzxw8gvb099c65bxsc0aqfwn55l2hyr7zskqc3apka"; depends=[]; };
COPDSexualDimorphism_data = derive2 { name="COPDSexualDimorphism.data"; version="1.40.0"; sha256="0wxhsj29yycmfgwl1sxz3yynwwwccxs1n9kcvdd6940jm4rz8nvq"; depends=[]; };
COSMIC_67 = derive2 { name="COSMIC.67"; version="1.40.0"; sha256="0b9w91qvxakrwwgkzfmhd7ily9yy5jmwimiykckksrhf1fr7i7zp"; depends=[GenomicRanges SummarizedExperiment VariantAnnotation]; };
CRCL18 = derive2 { name="CRCL18"; version="1.24.0"; sha256="1f513yxinql9qnxmlcfarhn840bxkbwxjqs661c9zliah26hv2wp"; depends=[Biobase]; };
CardinalWorkflows = derive2 { name="CardinalWorkflows"; version="1.36.0"; sha256="09b0a7ss64mx0ag6rwa7nld0hfzhrr7pfy4iimd0isfz1hm55kd8"; depends=[Cardinal]; };
CellMapperData = derive2 { name="CellMapperData"; version="1.30.0"; sha256="1rw0793g5bj1zwa5wi4f9d7l3y29c88c2s16ia0ph1j72zr0vyrn"; depends=[CellMapper ExperimentHub]; };
ChAMPdata = derive2 { name="ChAMPdata"; version="2.36.0"; sha256="0x006ilgqrf15135ivxv8qrcyhssl1w6pm1gpnna96za58l2f2rr"; depends=[BiocGenerics GenomicRanges]; };
ChIPXpressData = derive2 { name="ChIPXpressData"; version="1.42.0"; sha256="0jfiii3akdsg4drj3x3rmjakzr85bhzdxl5w433qkrzb4dm724q0"; depends=[bigmemory]; };
ChIPexoQualExample = derive2 { name="ChIPexoQualExample"; version="1.28.0"; sha256="07m4515g0gq4qv7yyx0qy0y4c2zb1dm30yhkzh43z34m6rkgsf1f"; depends=[]; };
ChimpHumanBrainData = derive2 { name="ChimpHumanBrainData"; version="1.42.0"; sha256="04cixcachip43kynlz4l6fh1y0wdzijgipvkz5rvlhqca7mpdqss"; depends=[affy hexbin limma qvalue statmod]; };
CluMSIDdata = derive2 { name="CluMSIDdata"; version="1.20.0"; sha256="01r4cfy0ny5vh0x1ihkynyxfxgjsprhim7913vzj0d1kgdkzdr6z"; depends=[]; };
CoSIAdata = derive2 { name="CoSIAdata"; version="1.4.0"; sha256="1mld9j54ywkgz63brf8lmfi57f1hmclyv3m9lw201wyni48nx377"; depends=[ExperimentHub]; };
ConnectivityMap = derive2 { name="ConnectivityMap"; version="1.40.0"; sha256="1i7bv10kmmgb355nmp3qsm9awcba69h8chhvcmw718hg5x2axrdh"; depends=[]; };
CopyNeutralIMA = derive2 { name="CopyNeutralIMA"; version="1.22.0"; sha256="12pw212lrqsas08hzan6sh56iasx74adbnngvyj2dllgc30971i8"; depends=[ExperimentHub Rdpack]; };
CopyhelpeR = derive2 { name="CopyhelpeR"; version="1.36.0"; sha256="1ijlba601wknkj6ybbnarcdw1z54f76gkdgynpry1v8jpbpvcadr"; depends=[]; };
CytoMethIC = derive2 { name="CytoMethIC"; version="1.0.0"; sha256="19ms0i2rs0b3lbg71m3k43hy0wx45yif6pv3nnchbafysnlzp04n"; depends=[BiocManager BiocParallel ExperimentHub sesame sesameData tibble]; };
DAPARdata = derive2 { name="DAPARdata"; version="1.34.0"; sha256="055rlbc2sky8am6vcz09vxpj8n34y3lmajlp8n6zz086w7fgfd8d"; depends=[MSnbase]; };
DExMAdata = derive2 { name="DExMAdata"; version="1.12.0"; sha256="17gm48hawh42cdbqr1bbrb7nccx3lwan8nca353vyj43pjr3s46n"; depends=[Biobase]; };
DLBCL = derive2 { name="DLBCL"; version="1.44.0"; sha256="0sakxhj192khn777aspzzckrjnzi89ng5wnzvzxgfdbpwh2nfl4d"; depends=[Biobase graph]; };
DMRcatedata = derive2 { name="DMRcatedata"; version="2.22.0"; sha256="119r3c2yc5hbj5x0h7r930rwhp0k5rsnfmbmvl2rhz02wq2ychhy"; depends=[ExperimentHub GenomicFeatures Gviz IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 plyr readxl rtracklayer]; };
DNAZooData = derive2 { name="DNAZooData"; version="1.4.0"; sha256="1bs2pnak2v2szp7zly8ysf8pqh7f70w70cbqqzvnxlf35npv7cxd"; depends=[BiocFileCache HiCExperiment rjson S4Vectors]; };
DeSousa2013 = derive2 { name="DeSousa2013"; version="1.40.0"; sha256="1icjl4rr8jk16hs8ri925v3gf9lasi4x39yf5a7av39byb2zwqif"; depends=[affy AnnotationDbi Biobase cluster ConsensusClusterPlus frma frmaTools gplots hgu133plus2_db hgu133plus2frmavecs pamr rgl ROCR siggenes survival sva]; };
DmelSGI = derive2 { name="DmelSGI"; version="1.36.0"; sha256="0xjj2ky0k8vazw97qsaf79c6cc3whxg0n5v6lrj6slk4hyfcmbw4"; depends=[abind gplots igraph knitr limma rhdf5 TSP]; };
DonaPLLP2013 = derive2 { name="DonaPLLP2013"; version="1.42.0"; sha256="0mcz0vdawz62qpdz8dmw359qim0b5wy42wp5r0h5pw05fh03b9bp"; depends=[EBImage]; };
DropletTestFiles = derive2 { name="DropletTestFiles"; version="1.14.0"; sha256="1n98mgzc6dscm6wy18mf0l5l5bvx3m35xdniarv83j8302xra9n1"; depends=[AnnotationHub ExperimentHub S4Vectors]; };
DrugVsDiseasedata = derive2 { name="DrugVsDiseasedata"; version="1.40.0"; sha256="0pmydn60f80ga6la6gxn1l1baw22kqqf1v2gbcniq7qm5axj6vh2"; depends=[]; };
DuoClustering2018 = derive2 { name="DuoClustering2018"; version="1.22.0"; sha256="042v3dpirp68qsdbhygvx3apx94xxdmzpm0swii30kzkw1r1xfck"; depends=[dplyr ExperimentHub ggplot2 ggthemes magrittr mclust purrr reshape2 tidyr viridis]; };
DvDdata = derive2 { name="DvDdata"; version="1.40.0"; sha256="0l298n6fj57yz6ml5xp1gmwxkj200pwsijbxxf2k8f028m4igy0k"; depends=[]; };
EGSEAdata = derive2 { name="EGSEAdata"; version="1.32.0"; sha256="0448hr7zz1wibi8l3plb9hsr6x0a7hz0pmqchhbzbsqwjjdrsgid"; depends=[]; };
ELMER_data = derive2 { name="ELMER.data"; version="2.28.0"; sha256="1ppmdqc0j3hkngg0nzx18vw8sgnfbrhxyb3l1l5mhv3gq02rslxz"; depends=[GenomicRanges]; };
EatonEtAlChIPseq = derive2 { name="EatonEtAlChIPseq"; version="0.42.0"; sha256="109law5cc64xipwqyanw71h8v5nx08s1iaskh05hm1w18dsjxff1"; depends=[GenomicRanges rtracklayer ShortRead]; };
EpiMix_data = derive2 { name="EpiMix.data"; version="1.6.0"; sha256="037kp9ziawdxfxydg4jb64k6klv9j78wp45gi72prisl4hj5hlp3"; depends=[ExperimentHub]; };
FANTOM3and4CAGE = derive2 { name="FANTOM3and4CAGE"; version="1.40.0"; sha256="0vmpgq694jvrcbnx2ik7cyq2axfm7xl3sibd2b9k3dpxaw62gipm"; depends=[]; };
FIs = derive2 { name="FIs"; version="1.32.0"; sha256="0l084k6p8nsnv51fxb55lass72qhjm4ff84i4y3if5p29gzl8frz"; depends=[]; };
FieldEffectCrc = derive2 { name="FieldEffectCrc"; version="1.14.0"; sha256="0g9b5a7l802z6g2s95x4m914hwwn5qqnlxvag3qbvy3bhwx3xyi6"; depends=[AnnotationHub BiocStyle DESeq2 ExperimentHub RUnit SummarizedExperiment]; };
Fletcher2013a = derive2 { name="Fletcher2013a"; version="1.40.0"; sha256="0l839hd76xr94qjcnscr9c40nvsx99ir6vsy1zx6dn7cha52mpar"; depends=[Biobase gplots limma VennDiagram]; };
Fletcher2013b = derive2 { name="Fletcher2013b"; version="1.40.0"; sha256="0agnkc207bma3h89xxrzcywny664f42vfd63qnmyda4kvdvvk0km"; depends=[Fletcher2013a igraph RColorBrewer RedeR RTN]; };
FlowSorted_Blood_450k = derive2 { name="FlowSorted.Blood.450k"; version="1.42.0"; sha256="0lc45dg5jq0kqycpsggrhi5fa4xj1ciqrj6iw548ccjgdyy2w1xh"; depends=[minfi]; };
FlowSorted_Blood_EPIC = derive2 { name="FlowSorted.Blood.EPIC"; version="2.8.0"; sha256="1b0azyslk2g08i6v1vv2niw32f0zqasw85b9klw83zdy2f5dcdvh"; depends=[AnnotationHub ExperimentHub genefilter minfi nlme quadprog S4Vectors SummarizedExperiment]; };
FlowSorted_CordBlood_450k = derive2 { name="FlowSorted.CordBlood.450k"; version="1.32.0"; sha256="1bbx2s8vzkawwpywcc33xbgjbc134q6fqgnflk30sfq1pfpxcmsm"; depends=[minfi]; };
FlowSorted_CordBloodCombined_450k = derive2 { name="FlowSorted.CordBloodCombined.450k"; version="1.20.0"; sha256="14486v4cs3j1jmifsgy3ihpm5x7i9581yz4bwsl3h2a7p86cdsbv"; depends=[AnnotationHub ExperimentHub IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylationEPICanno_ilm10b4_hg19 minfi SummarizedExperiment]; };
FlowSorted_CordBloodNorway_450k = derive2 { name="FlowSorted.CordBloodNorway.450k"; version="1.30.0"; sha256="1r78j0786bl9420cxcmhw07bzakl71r2kar41bwkd6xwfpj2znj5"; depends=[minfi]; };
FlowSorted_DLPFC_450k = derive2 { name="FlowSorted.DLPFC.450k"; version="1.40.0"; sha256="0h21h2nywy9dfqw3d1xw87wah19nidl8k7d0zqpqxql6agr1p92j"; depends=[minfi]; };
GIGSEAdata = derive2 { name="GIGSEAdata"; version="1.22.0"; sha256="1pwi3bn7xj2m7kg02dwn17rnhirl2qf1d67p2m9194f3iwy4vrp8"; depends=[]; };
GSBenchMark = derive2 { name="GSBenchMark"; version="1.24.0"; sha256="1al1k9c513l3if8kag24dkrmr6m8ajck30gd8yqkcncsrrgc769j"; depends=[]; };
GSE103322 = derive2 { name="GSE103322"; version="1.10.0"; sha256="0iv75phj9s8yyk0h3mnv12aak26kspbqhxvc4dbjjdd4g6jawlgv"; depends=[Biobase GEOquery]; };
GSE13015 = derive2 { name="GSE13015"; version="1.12.0"; sha256="0l1v30g1g93wk5bnhkw52pwypby6n0rxpp11aw93j733whn9j2y4"; depends=[Biobase GEOquery preprocessCore SummarizedExperiment]; };
GSE159526 = derive2 { name="GSE159526"; version="1.10.0"; sha256="1j8dy1zrw4isscspzb83n7k0x8yaf97zyyfyjh26ff7l997cqdvk"; depends=[]; };
GSE62944 = derive2 { name="GSE62944"; version="1.32.0"; sha256="041sby283m8ajb96gdg3zcrs0l6760svx8wijxfabq9dygiiaqp8"; depends=[Biobase GEOquery]; };
GSVAdata = derive2 { name="GSVAdata"; version="1.40.0"; sha256="0d1xgjizi58hwbralla62jch3kl4bqx0dg0lhh0h1bk9jyicyqjy"; depends=[Biobase GSEABase hgu95a_db]; };
GWASdata = derive2 { name="GWASdata"; version="1.42.0"; sha256="08w9qlf6vprvf383mji0hhzpn65jicqmkbljqndh7r7s4hp1z9jr"; depends=[GWASTools]; };
GenomicDistributionsData = derive2 { name="GenomicDistributionsData"; version="1.12.0"; sha256="16cj8w6n053aciz9wclppmc22b9s4a9lh58r6wi2lhs0sp7iirzn"; depends=[AnnotationFilter AnnotationHub BSgenome data_table ensembldb ExperimentHub GenomeInfoDb GenomicFeatures GenomicRanges]; };
GeuvadisTranscriptExpr = derive2 { name="GeuvadisTranscriptExpr"; version="1.32.0"; sha256="1n9yq4lqs6v9qdw9rm9hy8dww6n5axpkncms2drkjn2hv8xlqgj8"; depends=[]; };
HCAData = derive2 { name="HCAData"; version="1.20.0"; sha256="1kdp9iwn0vy7hlxyh09vrl6cwj7ajy2zqk23w3rxa5py710prp1q"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
HCATonsilData = derive2 { name="HCATonsilData"; version="1.2.0"; sha256="1wg0mvc3gwf80bgsfkvdcnnzy7qbnffbbrcy3f87jyw4a20irpp1"; depends=[base64enc ExperimentHub HDF5Array htmltools rmarkdown S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
HD2013SGI = derive2 { name="HD2013SGI"; version="1.44.0"; sha256="0r4nlbz7b70z1ii9wisk8nj218m2j5qmpfj8k2sp8k723gmsg4x0"; depends=[EBImage geneplotter gplots limma LSD RColorBrewer splots vcd]; };
HDCytoData = derive2 { name="HDCytoData"; version="1.24.0"; sha256="0pmzgp7x1zam3b7agi8mdq14qmx8nln9lnhiglax2pvg2a5n4ii4"; depends=[ExperimentHub flowCore SummarizedExperiment]; };
HEEBOdata = derive2 { name="HEEBOdata"; version="1.42.0"; sha256="0nkggzidbzya9g7v412iwjkm6pah5siha1jai48k3hhfa4i51jj7"; depends=[]; };
HIVcDNAvantWout03 = derive2 { name="HIVcDNAvantWout03"; version="1.44.0"; sha256="1mrza15digswpqszff88caclfwbwxql7dx6gih4gz72cnpyx3fpj"; depends=[]; };
HMP16SData = derive2 { name="HMP16SData"; version="1.24.0"; sha256="16x7mw5bdsyda1qv0v739pkr8lxq8hga84vhmaa8qnx45pwqyyh0"; depends=[AnnotationHub assertthat dplyr ExperimentHub kableExtra knitr magrittr readr S4Vectors stringr SummarizedExperiment tibble]; };
HMP2Data = derive2 { name="HMP2Data"; version="1.18.0"; sha256="014bf29kg9dizi3p0fdxrs42bf9a0dc2f7zd7yxzvzs3jqvniji2"; depends=[AnnotationHub assertthat data_table dplyr ExperimentHub kableExtra knitr magrittr MultiAssayExperiment phyloseq readr S4Vectors SummarizedExperiment]; };
HSMMSingleCell = derive2 { name="HSMMSingleCell"; version="1.24.0"; sha256="18p8hk2dq26pp4fvcf1m8wsvj1mn66i8nr900knl2n9vs09j70wy"; depends=[]; };
HarmanData = derive2 { name="HarmanData"; version="1.32.0"; sha256="1bf9jl9gl10gawv835hp8wxzzs1v9g3y3qzpki63j3dw5yssazh5"; depends=[]; };
HarmonizedTCGAData = derive2 { name="HarmonizedTCGAData"; version="1.26.0"; sha256="1zi0605nq51zpgap9jsbkilpxalwlpld0crvxivk6pmgrbavvlf7"; depends=[ExperimentHub]; };
HelloRangesData = derive2 { name="HelloRangesData"; version="1.30.0"; sha256="19gk0xhvpnqqrr6pxiwyyhszi93pjjfiknfj1gvzdrj81p06qhbh"; depends=[]; };
HiBED = derive2 { name="HiBED"; version="1.2.0"; sha256="0sqxlm2nn8g7qfwhndf79dg7v57ngmznr0b297v59nhhpigs1g2q"; depends=[AnnotationHub dplyr FlowSorted_Blood_EPIC FlowSorted_DLPFC_450k minfi SummarizedExperiment tibble]; };
HiCDataHumanIMR90 = derive2 { name="HiCDataHumanIMR90"; version="1.24.0"; sha256="1xndbds4clzpblc6gjz7lr48pkvi3j2m0a9jzavff45ds7aa6jxk"; depends=[]; };
HiCDataLymphoblast = derive2 { name="HiCDataLymphoblast"; version="1.40.0"; sha256="1sb384dca5n1lanv5k4idjx1b1hmvfdv1xp14m8k00gcnacgj9v3"; depends=[]; };
HiContactsData = derive2 { name="HiContactsData"; version="1.6.0"; sha256="0q92gvvlx4zx6sxi9sdzwjmwvdzaw6fj0nkr5d4h8j0hv7ycylmi"; depends=[AnnotationHub BiocFileCache ExperimentHub]; };
HighlyReplicatedRNASeq = derive2 { name="HighlyReplicatedRNASeq"; version="1.16.0"; sha256="01b09hk33p14lfrrpk0agi6prf9wbv6zs0qn07jdsm63vmawscds"; depends=[ExperimentHub S4Vectors SummarizedExperiment]; };
Hiiragi2013 = derive2 { name="Hiiragi2013"; version="1.40.0"; sha256="0xn3ayh2x04cvwrr476k8vlp8lhk5lxaqg01a0ynkrrc4scf2f99"; depends=[affy Biobase boot clue cluster genefilter geneplotter gplots gtools KEGGREST lattice latticeExtra MASS mouse4302_db RColorBrewer xtable]; };
HumanAffyData = derive2 { name="HumanAffyData"; version="1.30.0"; sha256="0jnikpd3djps3wp4vd3l9911jkzfm8h5pp0gv8l9bx5s2skkdrw1"; depends=[Biobase ExperimentHub]; };
IHWpaper = derive2 { name="IHWpaper"; version="1.32.0"; sha256="0s3x2chbr8ik3rhgzmfhaq8xlsnnkzfhjh4p327sn5aar6xhaj67"; depends=[Biobase BiocGenerics BiocParallel cowplot DESeq2 dplyr fdrtool genefilter ggplot2 IHW qvalue Rcpp SummarizedExperiment]; };
ITALICSData = derive2 { name="ITALICSData"; version="2.42.0"; sha256="1d0awis142kgx9hi0dggl6gqg17m0awqzn8ncpqh2lwaka372dq8"; depends=[]; };
Illumina450ProbeVariants_db = derive2 { name="Illumina450ProbeVariants.db"; version="1.40.0"; sha256="1jpknhp624753rhalf81kvl02k4wj19xpncagzf85c878953vph0"; depends=[]; };
IlluminaDataTestFiles = derive2 { name="IlluminaDataTestFiles"; version="1.42.0"; sha256="0xmyhqaa34chd2fxzbs7rk72wyx086cfhnjjh4lwjmb8acbp9xi8"; depends=[]; };
Iyer517 = derive2 { name="Iyer517"; version="1.46.0"; sha256="0b9j6bc0dfx5mqyd7z7bzmfp6s59cy4dqr1pxzjy05yyfznbc72p"; depends=[Biobase]; };
JASPAR2014 = derive2 { name="JASPAR2014"; version="1.40.0"; sha256="0m4g6vp78zsnzkfjmjfjwvd04505lz55njm7ml7dycwv6lmaxivk"; depends=[Biostrings]; };
JASPAR2016 = derive2 { name="JASPAR2016"; version="1.32.0"; sha256="09q5m71drbp64n26plr0a9bz71akcs4g7pqqyjmsmjrzi40kx7hr"; depends=[]; };
JohnsonKinaseData = derive2 { name="JohnsonKinaseData"; version="1.0.0"; sha256="1ry5p2zll8hazxil4sa57v50b7xr9bk4p5a509i4mvasb089al3l"; depends=[BiocParallel checkmate dplyr ExperimentHub purrr stringr tidyr]; };
KEGGandMetacoreDzPathwaysGEO = derive2 { name="KEGGandMetacoreDzPathwaysGEO"; version="1.24.0"; sha256="1fqybcvwa8dls2kv8mkdydmkw0bzihr3xp3m853mffkdjjsrzkyk"; depends=[Biobase BiocGenerics]; };
KEGGdzPathwaysGEO = derive2 { name="KEGGdzPathwaysGEO"; version="1.42.0"; sha256="1mbvy9x8zp02337sw92hh00vvqcamldqdsdy4zp53qiskrpidkdc"; depends=[Biobase BiocGenerics]; };
KOdata = derive2 { name="KOdata"; version="1.30.0"; sha256="1ia8fyas2yfird4a0md85s3ak96hb1pdrvay48zzsmhmpgf1yj44"; depends=[]; };
LRcellTypeMarkers = derive2 { name="LRcellTypeMarkers"; version="1.12.0"; sha256="1cghhh1rv8w7819dzi982q862m6yj62pckx8r925j2di1him9db8"; depends=[ExperimentHub]; };
LiebermanAidenHiC2009 = derive2 { name="LiebermanAidenHiC2009"; version="0.42.0"; sha256="0hx2lfpidg54r6kslz3yx6d1lv4vjdrk6s2whii0070hbr18lvjj"; depends=[IRanges KernSmooth]; };
ListerEtAlBSseq = derive2 { name="ListerEtAlBSseq"; version="1.36.0"; sha256="0j4vvac93m8vqidwvqczggkfdk07dabycqprhsnmj8f0g8hpaq9v"; depends=[methylPipe]; };
LungCancerACvsSCCGEO = derive2 { name="LungCancerACvsSCCGEO"; version="1.40.0"; sha256="1h0m67ak452bbza0s3dsmh2vi9wdi1mgl4bvflhin1gxcgb6fk6p"; depends=[]; };
LungCancerLines = derive2 { name="LungCancerLines"; version="0.42.0"; sha256="0gmjpagl71vddsvcx3iwql175lv0lc5m6j071wnwh10z59a9jams"; depends=[Rsamtools]; };
M3DExampleData = derive2 { name="M3DExampleData"; version="1.30.0"; sha256="0g7p7vn2im6d4gamalfm2lcssdg874fgb23wra5c34dzrzz9nr0v"; depends=[]; };
MACSdata = derive2 { name="MACSdata"; version="1.12.0"; sha256="0wffmyshsylf118xfcdyl8bd5xy9gz726lpx3avmxz3a8x917vbr"; depends=[]; };
MAQCsubset = derive2 { name="MAQCsubset"; version="1.42.0"; sha256="0x59gbv91d90hasa2gwkv00c06zp8fj4fk18386ajfag0wpvpb2n"; depends=[affy Biobase lumi]; };
MEDIPSData = derive2 { name="MEDIPSData"; version="1.40.0"; sha256="0x9317wgrhvqwh87d1vls5m06jyzsli2yhkc345n6iwxzz3a0brr"; depends=[]; };
MEEBOdata = derive2 { name="MEEBOdata"; version="1.42.0"; sha256="1cj563a0fjwdrbrwnfzk7l79mjg95hanp5rs6rvjz30b8s5gmwqm"; depends=[]; };
MMAPPR2data = derive2 { name="MMAPPR2data"; version="1.18.0"; sha256="0rbi0psjwk0jgjpliv0hhjvq9wmwb8w4wgqw45wqba6qfpm70wya"; depends=[Rsamtools]; };
MMDiffBamSubset = derive2 { name="MMDiffBamSubset"; version="1.40.0"; sha256="1psm5f7wrqwqwxzkmqkaz629i1d7zn2s5zs6sgmhijqp7rzhmhc4"; depends=[]; };
MOFAdata = derive2 { name="MOFAdata"; version="1.20.0"; sha256="1sjpvs2vdmmrr5mkk734502lhs3nr3n0brscvh77y1n42abxy26x"; depends=[]; };
MSMB = derive2 { name="MSMB"; version="1.22.0"; sha256="0kwjdgf526q63kln6j7a0v6v14x1qx5hlpannpb5grah2lyxz4rw"; depends=[tibble]; };
MUGAExampleData = derive2 { name="MUGAExampleData"; version="1.24.0"; sha256="0mrap1whvlzlmbrfg611cq3c9a1w2pq3wmijk842cybsx8az59xd"; depends=[]; };
MerfishData = derive2 { name="MerfishData"; version="1.6.0"; sha256="1i8war9rg7fwjdfhj5xa6sp3lmp30j0di04gckskmz6pk9pjjg4r"; depends=[AnnotationHub BumpyMatrix EBImage ExperimentHub S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
MetaGxBreast = derive2 { name="MetaGxBreast"; version="1.24.0"; sha256="05cz500r6fhlq5pfviiqj8cfv173027dqsdvhvvi57cbbx3qqn6r"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
MetaGxOvarian = derive2 { name="MetaGxOvarian"; version="1.24.0"; sha256="01cnm2rf6ls1q5plgazxqkrrw3b6mcrxbq0wrmi0ra8daqh6asi7"; depends=[AnnotationHub Biobase ExperimentHub impute lattice SummarizedExperiment]; };
MetaGxPancreas = derive2 { name="MetaGxPancreas"; version="1.24.0"; sha256="150i72jrq3qshsh0m20kxdcx7zxz1cgvlk0y2nxnacs1xbdnywxv"; depends=[AnnotationHub ExperimentHub impute S4Vectors SummarizedExperiment]; };
MetaScope = derive2 { name="MetaScope"; version="1.4.0"; sha256="1kaisvhp66g95w4dycw8jzsxh00f2c193rjcla6l5k2dn5rnsyr9"; depends=[BiocFileCache Biostrings data_table dplyr ggplot2 magrittr Matrix MultiAssayExperiment Rbowtie2 readr rlang Rsamtools S4Vectors stringr SummarizedExperiment taxize tibble tidyr]; };
MethylAidData = derive2 { name="MethylAidData"; version="1.36.0"; sha256="1f328mhf9b64scr45c9sshcgnsw9lb1g9in22xx2sak40dspjx2a"; depends=[MethylAid]; };
MethylSeqData = derive2 { name="MethylSeqData"; version="1.14.0"; sha256="197347pavq9hjcpwa9lq66lyjr1jb7mymd9pjz01rr9f77d7rqq5"; depends=[ExperimentHub GenomeInfoDb GenomicRanges HDF5Array IRanges rhdf5 S4Vectors SummarizedExperiment]; };
MicrobiomeBenchmarkData = derive2 { name="MicrobiomeBenchmarkData"; version="1.6.0"; sha256="00lr183x24yx4xd9cpxvzkcxmqp4dinfi1nz2arqqxnbfcp2s25j"; depends=[ape BiocFileCache S4Vectors SummarizedExperiment TreeSummarizedExperiment]; };
MouseAgingData = derive2 { name="MouseAgingData"; version="1.0.0"; sha256="1867xjhwbsjlzlm8fq0j8ggbhhym427l7vcx9i9g6zwkda7p64x3"; depends=[AnnotationHub ExperimentHub SingleCellExperiment]; };
MouseGastrulationData = derive2 { name="MouseGastrulationData"; version="1.18.0"; sha256="0adw98vym1jir1jrzaws7zrlfvls6rfl8bvkpq5sjy4crb33lxy2"; depends=[BiocGenerics BumpyMatrix ExperimentHub S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
MouseThymusAgeing = derive2 { name="MouseThymusAgeing"; version="1.12.0"; sha256="1vkbfni6zyr9qhzxfgfj7c5y639amsgbi3chcnsch36r35bnaxp2"; depends=[BiocGenerics ExperimentHub S4Vectors SingleCellExperiment SummarizedExperiment]; };
NCIgraphData = derive2 { name="NCIgraphData"; version="1.40.0"; sha256="0macj01775q3dzqhvsbfb2gkz0s8w49vgbfh2nhpgfykwzx5bwjm"; depends=[]; };
NGScopyData = derive2 { name="NGScopyData"; version="1.24.0"; sha256="1j780dkzv08ajyz0c9dh2ygqsyycyhnzvxl1jrc3gvxdddr1syvj"; depends=[]; };
NanoporeRNASeq = derive2 { name="NanoporeRNASeq"; version="1.14.0"; sha256="0lpjxpw5jd4zj9pjd3xjcaxkcn135rbhz628zpl44qrdnmyjg2wk"; depends=[ExperimentHub]; };
NestLink = derive2 { name="NestLink"; version="1.20.0"; sha256="1yh1nivipyrx3h0par8cf943licl1rs47jvfwz1392hi09vji15j"; depends=[AnnotationHub Biostrings ExperimentHub gplots protViz ShortRead]; };
NetActivityData = derive2 { name="NetActivityData"; version="1.6.0"; sha256="1jcj9k5mzf30wimwwv4gix85n597bv20bjh32nrha2yqiihp9k34"; depends=[]; };
Neve2006 = derive2 { name="Neve2006"; version="0.42.0"; sha256="0w3ph610lhxyg1knhsnnxpw32sw2n5p57svpbhqm3zmphx29nw3h"; depends=[annotate Biobase hgu133a_db]; };
NxtIRFdata = derive2 { name="NxtIRFdata"; version="1.10.0"; sha256="0qwqpzaqp9m8202sp7pdpii90j9yh97ipk36ivh9ba3s05agwq8p"; depends=[BiocFileCache ExperimentHub R_utils rtracklayer]; };
OMICsPCAdata = derive2 { name="OMICsPCAdata"; version="1.22.0"; sha256="0p0pjgffxc72b3wx6wnn0d0wc27qdp5z6my1xr19604drn7sd20x"; depends=[MultiAssayExperiment]; };
ObMiTi = derive2 { name="ObMiTi"; version="1.12.0"; sha256="061qyy69wlr5zhp3m499lq83dq7rwch8ll3a10vwmmwx1l40n8xa"; depends=[ExperimentHub SummarizedExperiment]; };
OnassisJavaLibs = derive2 { name="OnassisJavaLibs"; version="1.26.0"; sha256="1j2nyrkx9ish1v2yvr8wsahhclpy2mvdnrwnk19fkv8kr1hjwjws"; depends=[rJava]; };
PCHiCdata = derive2 { name="PCHiCdata"; version="1.32.0"; sha256="12nzy9m96jsal7sfqqdi8q7vq9rb4jc5h3hbl11aq4ik66048dyh"; depends=[Chicago]; };
PREDAsampledata = derive2 { name="PREDAsampledata"; version="0.44.0"; sha256="0ydb4y2s8kshia7k6mr941f1fc7nsqahm1g86ig3wpcq7al33z1b"; depends=[affy annotate Biobase PREDA]; };
PWMEnrich_Dmelanogaster_background = derive2 { name="PWMEnrich.Dmelanogaster.background"; version="4.38.0"; sha256="1wnm4jq5lzz50wzsz9v0kw104c1m67j68qlq6773ikdblsrlq23x"; depends=[PWMEnrich]; };
PWMEnrich_Hsapiens_background = derive2 { name="PWMEnrich.Hsapiens.background"; version="4.38.0"; sha256="0fjzlnzv4fk9a90vnl39shx6d84bv61rc3hda6h18md5al202jyj"; depends=[PWMEnrich]; };
PWMEnrich_Mmusculus_background = derive2 { name="PWMEnrich.Mmusculus.background"; version="4.38.0"; sha256="0w815iqjfv0f0kybr84y3q4xsvxihixbiljsdz09xgafam3l80a3"; depends=[PWMEnrich]; };
PasillaTranscriptExpr = derive2 { name="PasillaTranscriptExpr"; version="1.32.0"; sha256="0pwqfmcm0cw0z42571fa8w2lpy5mx516mckvk1dwys2yzdhjj24a"; depends=[]; };
PathNetData = derive2 { name="PathNetData"; version="1.40.0"; sha256="1pa6hrkyz1byldlch3h7brw2klxi9v2gg97j6814qiqiv84ms90y"; depends=[]; };
PepsNMRData = derive2 { name="PepsNMRData"; version="1.22.0"; sha256="1yzdpfbfivkyvnw76c24j2rbwfkjsnh0blv2z9x8aj1s0b3m5rjy"; depends=[]; };
PhyloProfileData = derive2 { name="PhyloProfileData"; version="1.18.0"; sha256="1bnzrqcyvhr4cnxkiwlpw5rjhrkbs6lm050yjnm79b2gd2whyk81"; depends=[BiocStyle Biostrings ExperimentHub]; };
ProData = derive2 { name="ProData"; version="1.42.0"; sha256="0ysmv66irrq7q8yzk77kkcrxdrcs1pa0z20dfhcsaqkd84yn74jz"; depends=[Biobase]; };
PtH2O2lipids = derive2 { name="PtH2O2lipids"; version="1.30.0"; sha256="0garsf77h2nb1zcy3z8ypk3c95pjjnzhxvfwlznn4i1l6qi45mds"; depends=[CAMERA LOBSTAHS xcms]; };
QDNAseq_hg19 = derive2 { name="QDNAseq.hg19"; version="1.34.0"; sha256="054c565wqr3cadym8kmf0wm0k2n3ri6x4bla4zyhra0v8cz6axjb"; depends=[QDNAseq]; };
QDNAseq_mm10 = derive2 { name="QDNAseq.mm10"; version="1.34.0"; sha256="08lj3vcnjg38fnnppa3nsg8sw6gfhklak9prpjxig9yzcg4pggwx"; depends=[QDNAseq]; };
QUBICdata = derive2 { name="QUBICdata"; version="1.32.0"; sha256="0gdsyvfrwsbbm786bkkqxxsc5s3wpn7fyhf4f227gr8sg3l7fkbi"; depends=[]; };
RGMQLlib = derive2 { name="RGMQLlib"; version="1.24.0"; sha256="09149yaw2gpypp0m7cghbjqksbj0ncly8fxlv1n7l2s8kaq5jkdq"; depends=[]; };
RITANdata = derive2 { name="RITANdata"; version="1.28.0"; sha256="0k1rziwpb26y19j2cii9y2vffr0sdkskll41njwpkl5mla5bzylv"; depends=[]; };
RLHub = derive2 { name="RLHub"; version="1.9.0"; sha256="0hm3wplzmmzsygz8dalwf6y798p4g2bssjdsg51w17s2mgm4hl98"; depends=[AnnotationHub ExperimentHub]; };
RMassBankData = derive2 { name="RMassBankData"; version="1.42.0"; sha256="10g42s6wq66fhvrxcwxf08073scpkinfldwwdl03r7lxy1wka426"; depends=[]; };
RNAinteractMAPK = derive2 { name="RNAinteractMAPK"; version="1.42.0"; sha256="0vm20x1lfgl671rrwvxybcwjgk7falb3d5xi6hiq9jivvbms9120"; depends=[Biobase fields gdata genefilter lattice MASS RNAinteract sparseLDA]; };
RNAmodR_Data = derive2 { name="RNAmodR.Data"; version="1.18.0"; sha256="0k5ykbry5si0wc6f1am3ln9pcl842hjrpmmw15j9sm565k5pmvmf"; depends=[ExperimentHub ExperimentHubData]; };
RNAseqData_HNRNPC_bam_chr14 = derive2 { name="RNAseqData.HNRNPC.bam.chr14"; version="0.42.0"; sha256="1xc5ya20nnrhdkib7590zv5g8q6cppd6qiwglxc6fj26ncdj6s73"; depends=[]; };
RRBSdata = derive2 { name="RRBSdata"; version="1.24.0"; sha256="1s6fjkz0dld7mlb1ylqmrw63jk3k0162rv2li6zkz66gc4aq10p0"; depends=[BiSeq]; };
RTCGA_CNV = derive2 { name="RTCGA.CNV"; version="1.32.0"; sha256="0ll5zj9d9d3ykkkq7iqq5sfvz8i4dc297nwkjpvjxrlazw28iiyl"; depends=[RTCGA]; };
RTCGA_PANCAN12 = derive2 { name="RTCGA.PANCAN12"; version="1.32.0"; sha256="0rmgg5j4rzqg78i43l9975vhdnh8r23lz78fkwwa94ihpqv1pbic"; depends=[RTCGA]; };
RTCGA_RPPA = derive2 { name="RTCGA.RPPA"; version="1.32.0"; sha256="158m31hysybyh3ha5n324srrxzc76bkv9fpblida2znv9sni6c52"; depends=[RTCGA]; };
RTCGA_clinical = derive2 { name="RTCGA.clinical"; version="20151101.34.0"; sha256="1s7fss644wkrvimqp2h3hq14gr0gjdqyj92hcrzff2qwyy5fzhky"; depends=[RTCGA]; };
RTCGA_mRNA = derive2 { name="RTCGA.mRNA"; version="1.32.0"; sha256="1anwv8cg38lpwfyxicqi8kml9q9gigrc7bzmp163322lxaq79c1q"; depends=[RTCGA]; };
RTCGA_methylation = derive2 { name="RTCGA.methylation"; version="1.32.0"; sha256="04q23w331vjmmmy2iy79grkgdn03iz53vw8npwx2wq1w8if8xdi4"; depends=[RTCGA]; };
RTCGA_miRNASeq = derive2 { name="RTCGA.miRNASeq"; version="1.32.0"; sha256="1bgcgsx01s7p24014rp8jiklmml822hxabrgf4xxagx4jzr91fxn"; depends=[RTCGA]; };
RTCGA_mutations = derive2 { name="RTCGA.mutations"; version="20151101.34.0"; sha256="19las4v4zg8wbb52wa4zmwpfpn80pyjp1kyvqkhgvpd8m3dj7951"; depends=[RTCGA]; };
RTCGA_rnaseq = derive2 { name="RTCGA.rnaseq"; version="20151101.34.0"; sha256="03kr2l5l5a7v98rna3a43543b7pqcwc7zhawnh92g3rdabk03w9s"; depends=[RTCGA]; };
RUVnormalizeData = derive2 { name="RUVnormalizeData"; version="1.24.0"; sha256="0w62ybdiq0dwd11ld48kl178qpd53xbfl51z2jwpi2pj1b86fg9l"; depends=[Biobase]; };
RcisTarget_hg19_motifDBs_cisbpOnly_500bp = derive2 { name="RcisTarget.hg19.motifDBs.cisbpOnly.500bp"; version="1.24.0"; sha256="170wjqnrvmdjcpx0bwwky3j7cxhbqvch781dzl6il2igca9kbqhq"; depends=[data_table]; };
ReactomeGSA_data = derive2 { name="ReactomeGSA.data"; version="1.18.0"; sha256="1410ks6s7albf6sly8ry0ln58ws9jlfn62amniqqsg46kx4xc4bh"; depends=[edgeR limma ReactomeGSA Seurat]; };
RegParallel = derive2 { name="RegParallel"; version="1.22.0"; sha256="0zaask3zpbqh6pmrx4hsi5wz7kkfhbl15xzhz10s8h9m739wm8c0"; depends=[arm data_table doParallel foreach iterators stringr survival]; };
RforProteomics = derive2 { name="RforProteomics"; version="1.42.0"; sha256="0irg6wrwy82xhlkgj1vphh6ncp9s6qcpp40mxv1vq969qjjchkk9"; depends=[BiocManager biocViews MSnbase R_utils]; };
RnBeads_hg19 = derive2 { name="RnBeads.hg19"; version="1.36.0"; sha256="0yn7n3zv9i76abx9wp0vw6wa7iylbrj2ffhzbc3irc104id0i4f9"; depends=[GenomicRanges]; };
RnBeads_hg38 = derive2 { name="RnBeads.hg38"; version="1.36.0"; sha256="05ffx8a76z9nnl3qhfjf6vfnnc2pqkw2jy4pc0wgqc1y3w9vg60l"; depends=[GenomicRanges]; };
RnBeads_mm10 = derive2 { name="RnBeads.mm10"; version="2.12.0"; sha256="151ivmy35ff850f1ij403bj5g9jhw8r515jjqbvq182x1cygbdfl"; depends=[GenomicRanges]; };
RnBeads_mm9 = derive2 { name="RnBeads.mm9"; version="1.36.0"; sha256="1bd5jai5jk1d3mqbx7x05ypfxma8s330na9n5bb9qzwxq7imd50b"; depends=[GenomicRanges]; };
RnBeads_rn5 = derive2 { name="RnBeads.rn5"; version="1.36.0"; sha256="098vy604ca0g408hl2g0p6kh2zzvzvbmyhbr0z081rbdpvzlnf4f"; depends=[GenomicRanges]; };
RnaSeqSampleSizeData = derive2 { name="RnaSeqSampleSizeData"; version="1.36.0"; sha256="1gm55gmsxna8a53k7a7yd99nzc4mg1kw7l5lnmkipa03lafa2yff"; depends=[edgeR]; };
SBGNview_data = derive2 { name="SBGNview.data"; version="1.18.0"; sha256="1hycjipfz6lr1hs1r7g65l565pcx77sz8bjacg5gdcv3rs1by2ql"; depends=[bookdown knitr rmarkdown]; };
SCLCBam = derive2 { name="SCLCBam"; version="1.36.0"; sha256="18im1j8j1y4hva4wg6vki59j1bifz9apijyi44wngsx68z19az35"; depends=[]; };
SFEData = derive2 { name="SFEData"; version="1.6.0"; sha256="03f7f9jrdszvwqgskk12jqw8mvyrrhcjd5v1nzdiy3csg2fa7nbs"; depends=[AnnotationHub BiocFileCache ExperimentHub]; };
SNAData = derive2 { name="SNAData"; version="1.50.0"; sha256="1l3g5gsiv5s83b6406s23snf62zav75s28nq68s8czbm1rsv6xw5"; depends=[graph]; };
SNAGEEdata = derive2 { name="SNAGEEdata"; version="1.40.0"; sha256="00m10r01sx027pnahw5ck1paplqpwsyq11dkacxq21ssvlc8kbl6"; depends=[]; };
SNPhoodData = derive2 { name="SNPhoodData"; version="1.34.0"; sha256="0r036vskwlk0mp7bgcbvr7iwffcm7g7imzwh5gri05j5p0rhny72"; depends=[]; };
STexampleData = derive2 { name="STexampleData"; version="1.12.3"; sha256="1c9lbghi1ybilrc7yiff12sjyaqpr8095wdvz941lnf3cmgci79q"; depends=[ExperimentHub SingleCellExperiment SpatialExperiment]; };
SVM2CRMdata = derive2 { name="SVM2CRMdata"; version="1.36.0"; sha256="18pd61cg12ghi8kjh1cjyrd248r20l39drbg9vpqmmcpai5f45wy"; depends=[]; };
SimBenchData = derive2 { name="SimBenchData"; version="1.12.0"; sha256="0a3q2ajr0pzwdabx306c8bia25cbih3hfzd5jgm2cx9f5i37f11v"; depends=[ExperimentHub S4Vectors]; };
Single_mTEC_Transcriptomes = derive2 { name="Single.mTEC.Transcriptomes"; version="1.32.0"; sha256="0h54w7lc8v5jicm6xf5i16pi8rw2fxqvssf7a0ql9qa6bv4c7sqy"; depends=[]; };
SingleCellMultiModal = derive2 { name="SingleCellMultiModal"; version="1.16.0"; sha256="1kzfzprma01ppbpbzgfgaa3dins2915n3wqsrqapcxfks7zvaciq"; depends=[AnnotationHub BiocBaseUtils BiocFileCache ExperimentHub HDF5Array Matrix MultiAssayExperiment S4Vectors SingleCellExperiment SpatialExperiment SummarizedExperiment]; };
SingleMoleculeFootprintingData = derive2 { name="SingleMoleculeFootprintingData"; version="1.12.0"; sha256="0xdi5rpqpj07h8j1n7wxfsmvrp6zsnc5rq1b2frdp8x3xdlf5dxn"; depends=[ExperimentHub]; };
SomatiCAData = derive2 { name="SomatiCAData"; version="1.42.0"; sha256="01k9s97rd78pciv4yaij07zzrijvfidpg6hh4h67mnxc90pg3r8w"; depends=[]; };
SomaticCancerAlterations = derive2 { name="SomaticCancerAlterations"; version="1.40.0"; sha256="11jvin7y5ys1lxwfjrwb4vw4gcpj09y0n6rhs87w27gcpj4dk7dm"; depends=[GenomicRanges IRanges S4Vectors]; };
SpatialDatasets = derive2 { name="SpatialDatasets"; version="1.2.0"; sha256="0qg9x657kamqqcifziagp3qrk5h2zh16jl8dprzl7nnrxhp0cra2"; depends=[ExperimentHub SpatialExperiment]; };
SpikeIn = derive2 { name="SpikeIn"; version="1.46.0"; sha256="1bnhag1cck99k6mgfnqddjxjhmpgax76p28hm686jkil416y0y47"; depends=[affy]; };
SpikeInSubset = derive2 { name="SpikeInSubset"; version="1.44.0"; sha256="118v972wwq4h2ww2nlb7mzva3d38c4hzmbq0v28500q2zc1ykv4l"; depends=[affy Biobase]; };
SubcellularSpatialData = derive2 { name="SubcellularSpatialData"; version="1.0.0"; sha256="0lyg6hiv8ch7c8a7zzi02c9fmq2zqif88khhslj15gvg5dznw79v"; depends=[dplyr hexbin Matrix SpatialExperiment]; };
TBX20BamSubset = derive2 { name="TBX20BamSubset"; version="1.40.0"; sha256="0hxmizdgrbv6vqlxj6hn4wiazjf3cwaaq17pagqmjlfxbqb4mlzk"; depends=[Rsamtools xtable]; };
TCGAMethylation450k = derive2 { name="TCGAMethylation450k"; version="1.40.0"; sha256="1c2jgrh5fsnq4d8aw8p1147jsdz8yi60i3naxsd8kj3s9mn1vfn2"; depends=[]; };
TCGAWorkflowData = derive2 { name="TCGAWorkflowData"; version="1.28.0"; sha256="0sg9zn06rf63n9z6qggxwrh5mxjg0gq1zjj1fn141d7xdbw1j784"; depends=[SummarizedExperiment]; };
TCGAbiolinksGUI_data = derive2 { name="TCGAbiolinksGUI.data"; version="1.24.0"; sha256="1r36f7nvvjjgkgmhha81n2iyr9k4nzy0qkkblm483rgzxav4gqa6"; depends=[]; };
TCGAcrcmRNA = derive2 { name="TCGAcrcmRNA"; version="1.24.0"; sha256="07sszvf7wd50gj5sgkj4di9a5y4yqcgi9ykssmp9n16bam1xp0a8"; depends=[Biobase]; };
TCGAcrcmiRNA = derive2 { name="TCGAcrcmiRNA"; version="1.24.0"; sha256="0jc6shc18kvd69v8wrgifg3cvi5idv1hlnd4x93njxbj9yyxr8xd"; depends=[Biobase]; };
TENxBUSData = derive2 { name="TENxBUSData"; version="1.18.0"; sha256="19a909cs0z8zy6vwlxxgk76ybj9yrhsxd2z8narf50rv96nyid0s"; depends=[AnnotationHub BiocGenerics ExperimentHub]; };
TENxBrainData = derive2 { name="TENxBrainData"; version="1.24.0"; sha256="1kb5i3xrins9jd40xzyi4sj9nks83vzw1w8pk7ji6kgyjdgm1by6"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
TENxPBMCData = derive2 { name="TENxPBMCData"; version="1.22.0"; sha256="089q81wiq7flr1a72gmj7y1ds73zzc2h96pnjm7s5sbysgy4jgx9"; depends=[AnnotationHub ExperimentHub HDF5Array SingleCellExperiment]; };
TENxVisiumData = derive2 { name="TENxVisiumData"; version="1.12.0"; sha256="08jcq5vq0ki4q6ndpm3799kwiy62j446v4kbfdfw7j7rwgjmhjhs"; depends=[ExperimentHub SpatialExperiment]; };
TENxXeniumData = derive2 { name="TENxXeniumData"; version="1.0.0"; sha256="1zjyry8m4f8xw6apib90rv8lyxhpdy3nqgawshhslv8w8qwk3xs9"; depends=[BumpyMatrix ExperimentHub SpatialExperiment SpatialFeatureExperiment SummarizedExperiment]; };
TMExplorer = derive2 { name="TMExplorer"; version="1.14.0"; sha256="0qxm46dryq7c4xrbkhgbfqxqn0p7x1nxklqhkdw8qmklszc2b870"; depends=[BiocFileCache Matrix SingleCellExperiment]; };
TabulaMurisData = derive2 { name="TabulaMurisData"; version="1.22.0"; sha256="0gnv8yfksrc59prki6w6xa5pw5nszxkx88i5av3ln21hq5idj4cm"; depends=[ExperimentHub]; };
TabulaMurisSenisData = derive2 { name="TabulaMurisSenisData"; version="1.10.0"; sha256="1b1aj06qacvzpabz8r0vkqpm0pp48vx26xx84h5ihzg9232wrqmy"; depends=[AnnotationHub ExperimentHub gdata HDF5Array SingleCellExperiment SummarizedExperiment]; };
TargetScoreData = derive2 { name="TargetScoreData"; version="1.40.0"; sha256="18y7vidhgkhpr9nlhxwhhi7z07vj6ii1vwl9c8dyyhzfc8icsmsn"; depends=[]; };
TargetSearchData = derive2 { name="TargetSearchData"; version="1.42.0"; sha256="0dzb1jazdwx37kx0xwvv9i7rfq1712bifz542x4liahvxjgz7prg"; depends=[]; };
TimerQuant = derive2 { name="TimerQuant"; version="1.34.0"; sha256="1gjnfmsbcj8ndj1fssclzlb5qd482c38gpi0q4x7ls98bk42r44x"; depends=[deSolve dplyr ggplot2 gridExtra locfit shiny]; };
TransOmicsData = derive2 { name="TransOmicsData"; version="1.0.1"; sha256="0sfpks0wfzlrh5qqg0id5c99l1dzj2l1nd5h3shjhp0lm4f5v8w0"; depends=[S4Vectors]; };
TumourMethData = derive2 { name="TumourMethData"; version="1.2.0"; sha256="1xwm2amlb1vrf3hpdw9387nglc6pbxxdxik56byr5p8856fkjdav"; depends=[ExperimentHub GenomicRanges HDF5Array R_utils rhdf5 SummarizedExperiment]; };
VariantToolsData = derive2 { name="VariantToolsData"; version="1.28.0"; sha256="0k8fg4bhghva32qk4l6r4g6asdkyl2afx0frbk0f57b2hqix69fb"; depends=[BiocGenerics GenomicRanges VariantAnnotation]; };
VectraPolarisData = derive2 { name="VectraPolarisData"; version="1.8.0"; sha256="13r0r1whcxzzhlsa3bjsq9kp3csgnynbcrxj06v5s73xf8xify00"; depends=[ExperimentHub SpatialExperiment]; };
WES_1KG_WUGSC = derive2 { name="WES.1KG.WUGSC"; version="1.36.0"; sha256="1yv62ydvlsl52awzn2nsa52vaz4naf4biw57awpmz0cp4rb68kdb"; depends=[]; };
WGSmapp = derive2 { name="WGSmapp"; version="1.16.0"; sha256="0k4zyj9dn5x710a1vv11156brz52yf9lzmlmx9axcfsch5dcvi7x"; depends=[GenomicRanges]; };
WeberDivechaLCdata = derive2 { name="WeberDivechaLCdata"; version="1.6.0"; sha256="0nkh8c329n0jh33wa0knnwi9vvk8na1d3lpm3g5lrzl8624kdllv"; depends=[ExperimentHub SingleCellExperiment SpatialExperiment]; };
XhybCasneuf = derive2 { name="XhybCasneuf"; version="1.42.0"; sha256="0n0k6h9b9gkywy6cmlx15g09287aqzvc228j3jgjkv0ljbwsq756"; depends=[affy ath1121501cdf RColorBrewer tinesath1cdf]; };
adductData = derive2 { name="adductData"; version="1.20.0"; sha256="1ydd7zxag0cmw7mj38srqs4w6lbp1ic5i8s1ay6pifv14arcncrz"; depends=[AnnotationHub ExperimentHub]; };
affycompData = derive2 { name="affycompData"; version="1.42.0"; sha256="16fri51jhp0lm3aj9hw2s6jzxjlxz2qbd36j9zcbcs7sb6jh42jy"; depends=[affycomp Biobase]; };
affydata = derive2 { name="affydata"; version="1.52.0"; sha256="0srmrb2pf5dhjfm1l1jd06jgnah16qxillxi5zjr8vq7pgvw8x4b"; depends=[affy]; };
airway = derive2 { name="airway"; version="1.24.0"; sha256="0yj9ac58iplcakzw6yyglyiwwhiyslp2hlnszhp3258grvbfvcby"; depends=[SummarizedExperiment]; };
antiProfilesData = derive2 { name="antiProfilesData"; version="1.40.0"; sha256="1mlps08fra7ssbymwf260c43skp2pzw477mp090ycfaj8ncdzqqp"; depends=[Biobase]; };
aracne_networks = derive2 { name="aracne.networks"; version="1.30.0"; sha256="1xfzs1n9wis3r0q4g0hg4amhx4zldbslidx1i4d90vcrgzfdh4x6"; depends=[viper]; };
bcellViper = derive2 { name="bcellViper"; version="1.40.0"; sha256="0mx92gs9065lz0c01mzng9snalvmdb3xbsm1r3f6fnhg478da4yq"; depends=[Biobase]; };
beadarrayExampleData = derive2 { name="beadarrayExampleData"; version="1.42.0"; sha256="0l5n1d7x4gc3w2kc6vq0gqxp1wdpa2sn5k75yf5fc802m11nrkd1"; depends=[beadarray Biobase]; };
benchmarkfdrData2019 = derive2 { name="benchmarkfdrData2019"; version="1.18.0"; sha256="1k8gpql57jps51bh5kdn5j5mgz36a369p4sz37sbqkfrskfs8m91"; depends=[ExperimentHub SummarizedExperiment]; };
beta7 = derive2 { name="beta7"; version="1.42.0"; sha256="0c7zal2hk7knw2mcfkfh7svz3b6nz98y895mhl3ari986wqpj4nv"; depends=[marray]; };
biotmleData = derive2 { name="biotmleData"; version="1.28.0"; sha256="0c50778lwkapgvwn7nvhjyn7irxn85d97mfyawgfgs9kzyfxx1a3"; depends=[]; };
biscuiteerData = derive2 { name="biscuiteerData"; version="1.18.0"; sha256="1qv2ajy312diacb3mihc3q7hrrlq48k5vd9v0g6w38cqz6gnz0as"; depends=[AnnotationHub curl ExperimentHub GenomicRanges]; };
bladderbatch = derive2 { name="bladderbatch"; version="1.42.0"; sha256="00cgkpa6mb32q3xl5clkpdh5rkwx7c81rxmyh2qr0jpwpmd3gjwc"; depends=[Biobase]; };
blimaTestingData = derive2 { name="blimaTestingData"; version="1.24.0"; sha256="0414hiah3yzkcdayb43vz5dafv6samaczg556wyl7ig2275k3q6h"; depends=[]; };
bodymapRat = derive2 { name="bodymapRat"; version="1.20.0"; sha256="15kjgqq7lq94pjqg380swqrkv684kgbpkaikfxxdx4cpgx8sjzn7"; depends=[ExperimentHub SummarizedExperiment]; };
breakpointRdata = derive2 { name="breakpointRdata"; version="1.22.0"; sha256="1hm190ji3s451x2hchmpyzx6v4n8p1n6fdqg7cbzmj19rzsb4wha"; depends=[]; };
breastCancerMAINZ = derive2 { name="breastCancerMAINZ"; version="1.42.0"; sha256="1i2h0f38skkv1m5gas15jdjw4jl8ma4w1sv74j1x9g1zfl9xq3rg"; depends=[]; };
breastCancerNKI = derive2 { name="breastCancerNKI"; version="1.42.0"; sha256="0vnwyqn5wg9iqmgb6zx6rciw62n8bxkdyfxlaggl35dpwwpzdb2f"; depends=[]; };
breastCancerTRANSBIG = derive2 { name="breastCancerTRANSBIG"; version="1.42.0"; sha256="0s2h6qy19jnk5s23r0vkv6j77n5qr7ncanmkz0ybx5qyfyicz9m4"; depends=[]; };
breastCancerUNT = derive2 { name="breastCancerUNT"; version="1.42.0"; sha256="0i8xw534hywfa382nyfy94g2fk0nfaid306dxrlijkfbs2b24dy9"; depends=[]; };
breastCancerUPP = derive2 { name="breastCancerUPP"; version="1.42.0"; sha256="183dy6c3wqc2m65vihdn840wvnq64vwndwcfsvhw39znqpszhs9k"; depends=[]; };
breastCancerVDX = derive2 { name="breastCancerVDX"; version="1.42.0"; sha256="0mvm2a77mss85vi8x3i35d54z70advyshsmadhl6aysrzfiw5ifd"; depends=[]; };
brgedata = derive2 { name="brgedata"; version="1.26.0"; sha256="1h2ka8k12lx4326y50scw80n21xkf67ks7kqs2ss6sbwd536gm61"; depends=[Biobase SummarizedExperiment]; };
bronchialIL13 = derive2 { name="bronchialIL13"; version="1.42.0"; sha256="0g1cfhfjycpv1jmba5jddff88m7pbz1l02kci9w73qzjcnqgpp12"; depends=[affy]; };
bsseqData = derive2 { name="bsseqData"; version="0.42.0"; sha256="06k6r288bqi9dshpdz6qlz0d3p1srz8yc1b0xrar9wy5fckdb97d"; depends=[bsseq]; };
cMap2data = derive2 { name="cMap2data"; version="1.40.0"; sha256="1vaqqszdx3bfdqm3ckn12w9f474wnyqyi7kz0wrj1y50wnwpm38f"; depends=[]; };
cancerdata = derive2 { name="cancerdata"; version="1.42.0"; sha256="1jgcg16v09wpga5zivx221mz2bnl37gwpjhlmq9a8h5vxlqcb9wl"; depends=[Biobase]; };
ccdata = derive2 { name="ccdata"; version="1.30.0"; sha256="0q77dk9rifwpp1c2ga1y3yxf1dwvlkmmn5sw285a1c5h6pipxsj3"; depends=[]; };
celarefData = derive2 { name="celarefData"; version="1.22.0"; sha256="1njq6i1803avcn2h9p3d2cnp8viwv7jak1b5kfqhcvl8jwwxlr59"; depends=[]; };
celldex = derive2 { name="celldex"; version="1.14.0"; sha256="155hnh62ra06b52xk78f111b10gm34d1djvl5w5mabvrk4vknwj6"; depends=[alabaster_base alabaster_matrix alabaster_se AnnotationDbi AnnotationHub DBI DelayedArray DelayedMatrixStats ExperimentHub gypsum jsonlite Matrix RSQLite S4Vectors SummarizedExperiment]; };
cfToolsData = derive2 { name="cfToolsData"; version="1.2.0"; sha256="0hhc9fn6rm9dnzlvs3lk5v0h5m76knl5nblnda26a36wdwz547ld"; depends=[ExperimentHub]; };
chipenrich_data = derive2 { name="chipenrich.data"; version="2.28.0"; sha256="1kpc3ljayxycadshdgyzkbagh4vd7cmyqqccy61269skpasdnwbv"; depends=[AnnotationDbi BiocGenerics GenomeInfoDb GenomicRanges IRanges readr rtracklayer S4Vectors]; };
chipseqDBData = derive2 { name="chipseqDBData"; version="1.20.0"; sha256="16mfq2mdwrc40i6wyjc9g897sk2rk0way6shc0nw9d1fkf4fsf8l"; depends=[AnnotationHub ExperimentHub Rsamtools S4Vectors]; };
chromstaRData = derive2 { name="chromstaRData"; version="1.30.0"; sha256="0v28zg8z5b72hci7rqbvjvcgp979zxnq6xgck4baypmkj9ac5wn3"; depends=[]; };
clustifyrdatahub = derive2 { name="clustifyrdatahub"; version="1.14.0"; sha256="1asssxa8kw2r5ai14kg06ajzkqfmqfvrp6ydjwgf8pkyc4m53r4p"; depends=[ExperimentHub]; };
cnvGSAdata = derive2 { name="cnvGSAdata"; version="1.40.0"; sha256="19dskn9kjk1phn2xlsx4wikwvagv48av6ar845hzwwyq7rzllyy6"; depends=[cnvGSA]; };
colonCA = derive2 { name="colonCA"; version="1.46.0"; sha256="17h4vcpvll01ggp280bspxsl1swiakfabs6n73874sjnik64wp2q"; depends=[Biobase]; };
crisprScoreData = derive2 { name="crisprScoreData"; version="1.8.0"; sha256="1a5ji6zbvnlbdzcqj4arpi6am7vaq31brxaxawr93knpy4lksd4f"; depends=[AnnotationHub ExperimentHub]; };
curatedAdipoArray = derive2 { name="curatedAdipoArray"; version="1.16.0"; sha256="0gs68q5gfn0ba6y0p429s8v989cfnnlii9066wvqgd8ixqcig66i"; depends=[]; };
curatedAdipoChIP = derive2 { name="curatedAdipoChIP"; version="1.20.0"; sha256="1yzxz6wjddf4mn6yw8zlz2yq6rhfs0639widql99hjclni1llxkc"; depends=[ExperimentHub SummarizedExperiment]; };
curatedAdipoRNA = derive2 { name="curatedAdipoRNA"; version="1.20.0"; sha256="1q22clkypj8y6am609h4748z2jc2lhhm8kdcv9s3dzx272dmm0w5"; depends=[SummarizedExperiment]; };
curatedBladderData = derive2 { name="curatedBladderData"; version="1.40.0"; sha256="0ma11myfh5kddksn81rspjq7l44vn0mgz2c98krpdgfv8qynf6ky"; depends=[affy]; };
curatedBreastData = derive2 { name="curatedBreastData"; version="2.32.0"; sha256="0zglh1h9hw6rnpdl4v5v7cmzgcvxa0phfixfwwmi8il0rn40jd68"; depends=[Biobase BiocStyle ggplot2 impute XML]; };
curatedCRCData = derive2 { name="curatedCRCData"; version="2.35.0"; sha256="1q6xmp32w39jsw7jrphpygyv63vd640nmpz69nlhhisbbpjd259c"; depends=[BiocGenerics nlme]; };
curatedMetagenomicData = derive2 { name="curatedMetagenomicData"; version="3.12.0"; sha256="1hp1s5v567xidmmpn6jv7i3fid5hwg3i43y9471aabq00nsg67b1"; depends=[AnnotationHub dplyr ExperimentHub magrittr mia purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr tidyselect TreeSummarizedExperiment]; };
curatedOvarianData = derive2 { name="curatedOvarianData"; version="1.42.0"; sha256="0rigr8nwcr60vp164hyjw20dw54mwlfg71m4naiz6m1v47d7cg1i"; depends=[Biobase BiocGenerics]; };
curatedPCaData = derive2 { name="curatedPCaData"; version="1.0.0"; sha256="0wqvg0z19lxyqbbsl7fbq12jgycpqycx45vy24z4sph48kz2ag3w"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment RaggedExperiment rlang S4Vectors]; };
curatedTBData = derive2 { name="curatedTBData"; version="2.0.0"; sha256="03wmr9iyhqwbpmp7azq9im5waxy4viqhx0lsmqpk2bsijmigrg0z"; depends=[AnnotationHub ExperimentHub MultiAssayExperiment rlang]; };
curatedTCGAData = derive2 { name="curatedTCGAData"; version="1.26.0"; sha256="1xdygjwqgy6kjjxzvsy25bckc0f8j5m42wrj1vrnwy5fp0q7y287"; depends=[AnnotationHub ExperimentHub HDF5Array MultiAssayExperiment S4Vectors SummarizedExperiment]; };
davidTiling = derive2 { name="davidTiling"; version="1.44.0"; sha256="06r600sn2ga5jrwahxh3ysv4c713sxi0g6y6v46zpcwilkj10gp3"; depends=[Biobase GO_db tilingArray]; };
depmap = derive2 { name="depmap"; version="1.18.0"; sha256="0imajc5kiqf45sjwxagvg5bjvmnrzrk3ls4bflwxj9rnd84v2r62"; depends=[AnnotationHub BiocFileCache curl dplyr ExperimentHub httr2 tibble]; };
derfinderData = derive2 { name="derfinderData"; version="2.22.0"; sha256="14gyw3cii7np0rw9j39hcrij9kcybbrwxwz9qa4wx98ddzfixrcn"; depends=[]; };
diffloopdata = derive2 { name="diffloopdata"; version="1.32.0"; sha256="0qhbdq5j900nmpfbz3bcr4jn9zd43fnr7rd94lsv69dpjmsv7ikw"; depends=[]; };
diggitdata = derive2 { name="diggitdata"; version="1.36.0"; sha256="0js94wbi9rfsmwj7q8mbh2fimwpiw45ahb1a1g0300zxzf9y61ax"; depends=[Biobase viper]; };
dorothea = derive2 { name="dorothea"; version="1.16.0"; sha256="08s961ra7f6q4dag39rgdrg5minvzm58g22r8xkwfiw0hfavacbg"; depends=[bcellViper decoupleR dplyr magrittr]; };
dressCheck = derive2 { name="dressCheck"; version="0.42.0"; sha256="1i6lcf8lxp0v0lpkckx3yhzyzj841w3x6qj3kaxls4bfkzr3hls6"; depends=[Biobase]; };
dyebiasexamples = derive2 { name="dyebiasexamples"; version="1.44.0"; sha256="1ihkhfhgqywnp2vxrqpzvm5w3ncy6acwcns2ah1fm8xsq1bvcs5v"; depends=[GEOquery marray]; };
easierData = derive2 { name="easierData"; version="1.10.0"; sha256="0l6qhlaa02d2sqaa0yfxqqm1giga5jppq74sfgrih1ccqh348am7"; depends=[AnnotationHub ExperimentHub SummarizedExperiment]; };
ecoliLeucine = derive2 { name="ecoliLeucine"; version="1.44.0"; sha256="09pk2ay2j5gvk60vavs03cgfhma8bvsynxabkfcvr1hkl87qfl2k"; depends=[affy ecolicdf]; };
emtdata = derive2 { name="emtdata"; version="1.12.0"; sha256="0b3hvggndw3bzddk0vflbn0wx8fr08b6nphjhil1wqlyp3535xk4"; depends=[edgeR ExperimentHub SummarizedExperiment]; };
epimutacionsData = derive2 { name="epimutacionsData"; version="1.8.0"; sha256="06z3lxp8lsr2nqw3yqiddy3h4y6iid3n7s1ykbaz0dpm05vdq8i2"; depends=[]; };
estrogen = derive2 { name="estrogen"; version="1.50.0"; sha256="077mr5xz2w90iik8r6jraip377dbily14rnkpc7njicqnnq1d6m7"; depends=[]; };
etec16s = derive2 { name="etec16s"; version="1.32.0"; sha256="0hlvvmgm42g0lzsb5kljdfs0fcdpwwz3b3h7x88szg7fzqlvainz"; depends=[Biobase metagenomeSeq]; };
ewceData = derive2 { name="ewceData"; version="1.12.0"; sha256="1xk4i38a1yb3zx42hfh2b427y28103h2mpjvxa03fnwkl0lcb46j"; depends=[ExperimentHub]; };
faahKO = derive2 { name="faahKO"; version="1.44.0"; sha256="0bd93q332m7agqgsfkgsp87wv5fx6g2qsgn2z2n0bfsn3vmjjzc4"; depends=[xcms]; };
fabiaData = derive2 { name="fabiaData"; version="1.42.0"; sha256="1wzq802q1i52jh82yh9i2kdbya7qrmcjr646dc78vr6vng2k541s"; depends=[Biobase]; };
ffpeExampleData = derive2 { name="ffpeExampleData"; version="1.42.0"; sha256="1dzrbqlgh114m4lvikp638bqmw0yq3rwz9bpb1cfbpqlyji97wx7"; depends=[lumi]; };
fibroEset = derive2 { name="fibroEset"; version="1.46.0"; sha256="09lpn8s95rbbmv0zk3mg512ddxdv7gpp16hqyh7krsrfr9r8kjxs"; depends=[Biobase]; };
fission = derive2 { name="fission"; version="1.24.0"; sha256="095fd01jd105826gpv038zwj7p4iz7drbm3gy6r0w329xlv4lpp2"; depends=[SummarizedExperiment]; };
flowPloidyData = derive2 { name="flowPloidyData"; version="1.30.0"; sha256="1qlwv4v1mgxk444scdvmdpak0rpph51mc4al1qfbavd34l4yq6zc"; depends=[]; };
flowWorkspaceData = derive2 { name="flowWorkspaceData"; version="3.16.0"; sha256="11p2b85h8dmajj0pakmb7i4lr2rx9ghlm8sy3pa696hpqnszimjl"; depends=[]; };
fourDNData = derive2 { name="fourDNData"; version="1.4.0"; sha256="1lixqb8n99w0qwr6hi5sql2r84dnp4zc7lqd6lhj0mgpya85b5zr"; depends=[BiocFileCache GenomicRanges HiCExperiment IRanges S4Vectors]; };
frmaExampleData = derive2 { name="frmaExampleData"; version="1.40.0"; sha256="1dgirbhamg53dmfwc76s5ivclxmy7sjhjm9crzwrj1bzl6056cr3"; depends=[]; };
furrowSeg = derive2 { name="furrowSeg"; version="1.32.0"; sha256="125wyqi4h7kkrhbcn4gknwlw6panian2hfsapwyqfxz0mg6ssg5z"; depends=[abind dplyr EBImage locfit tiff]; };
gDNAinRNAseqData = derive2 { name="gDNAinRNAseqData"; version="1.4.0"; sha256="0wpv9p96qxnk22p7ili8ic4gr8p3wb6jfn4v9f0d4kn385vvfwyp"; depends=[BiocGenerics ExperimentHub RCurl Rsamtools XML]; };
gDRtestData = derive2 { name="gDRtestData"; version="1.2.0"; sha256="0kdlqbs5qj6svnhsrhnsd644kcxyd8haws5h4djm4gplyx6vwqyj"; depends=[checkmate data_table]; };
gageData = derive2 { name="gageData"; version="2.42.0"; sha256="1kbs0fz1jnx3grd9mpclbahwbp3749ipwfs8ggl9299bhjrgh9i6"; depends=[]; };
gaschYHS = derive2 { name="gaschYHS"; version="1.42.0"; sha256="01r25gx65a9lcjzbjm6gckzy3hyr70cxswxkvprsbphh7pkll3np"; depends=[Biobase]; };
gcspikelite = derive2 { name="gcspikelite"; version="1.42.0"; sha256="0cphbkq13jknmzs6qyv3cj1m73a1wncnj7znjnymbc0ha7rwcd5i"; depends=[]; };
geneLenDataBase = derive2 { name="geneLenDataBase"; version="1.40.1"; sha256="0c8f0sqgrg7rc2vs9id9xzbwwv3zhy6ylqiisji20rw9ipzgv7k8"; depends=[GenomicFeatures rtracklayer txdbmaker]; };
genomationData = derive2 { name="genomationData"; version="1.36.0"; sha256="16mghhik2xzin14d7mqlwfy2dah3ccnga947z9id44vyz906wws7"; depends=[]; };
golubEsets = derive2 { name="golubEsets"; version="1.46.0"; sha256="1rv5y7cj4rpdg8vl0qd3071d12rvgqcffqsf1gx8kmdgz13hi4gl"; depends=[Biobase]; };
gpaExample = derive2 { name="gpaExample"; version="1.16.0"; sha256="0q87x5k8ql01k9m503k87wn5pkrygrilqrsb0aix7xjpxa8aia1n"; depends=[]; };
grndata = derive2 { name="grndata"; version="1.36.0"; sha256="1qkxpljvm9sipphgjygnrynbslyv5rlpvfy34q6w1rqhf6qv0n89"; depends=[]; };
h5vcData = derive2 { name="h5vcData"; version="2.24.0"; sha256="04ymiclfwwp68h8pzpxrfrb5x9njqknhyhihbcj4v51qzx0y4jid"; depends=[]; };
hapmap100khind = derive2 { name="hapmap100khind"; version="1.46.0"; sha256="0a8j45fxr3sm4q689v29n9gj60g21pk3ixhv7s9plig12ma7nfnz"; depends=[]; };
hapmap100kxba = derive2 { name="hapmap100kxba"; version="1.46.0"; sha256="1afvfh6mckyi575qlp579p1akya4q7h0c9zp28s7n5nyljmh572i"; depends=[]; };
hapmap500knsp = derive2 { name="hapmap500knsp"; version="1.46.0"; sha256="0lbrn02lyca76xk2h2iddxpkvsj2kvz37m1dn0l5pwbz6igpllqp"; depends=[]; };
hapmap500ksty = derive2 { name="hapmap500ksty"; version="1.46.0"; sha256="0lnzwdcjz5f9imqprkh9qxrakg8qdh3j83bq5qaaq54mdh76kd68"; depends=[]; };
hapmapsnp5 = derive2 { name="hapmapsnp5"; version="1.46.0"; sha256="03pmlz3cskxf683dpdns258gh8rv33amzpvb9mabbg0jagg2b9lw"; depends=[]; };
hapmapsnp6 = derive2 { name="hapmapsnp6"; version="1.46.0"; sha256="15npa8h6qpp1i0ir2y6knvzb5f4rn9zimyl6sw24ccqbvimjkf7f"; depends=[]; };
harbChIP = derive2 { name="harbChIP"; version="1.42.0"; sha256="1pliyvn6g3gbkiinz4q24ajmq0apw035a2c9xq6b91ccm8m7ddrk"; depends=[Biobase Biostrings IRanges]; };
healthyControlsPresenceChecker = derive2 { name="healthyControlsPresenceChecker"; version="1.8.0"; sha256="14gq24z99l04kcn13414zjn17184l3p5l6draxwy3820m9sijzgq"; depends=[geneExpressionFromGEO GEOquery magrittr xml2]; };
healthyFlowData = derive2 { name="healthyFlowData"; version="1.42.0"; sha256="01hq1nchjyzps5nvsvpgxrw1vds92fv0sggzlls21ggrjhyrx8kp"; depends=[flowCore]; };
hgu133abarcodevecs = derive2 { name="hgu133abarcodevecs"; version="1.42.0"; sha256="1p9l32lhk5cvqfgxkk3bdz4s9dcyczh9b0a8rvb2cf6zz0i3l6fh"; depends=[]; };
hgu133plus2CellScore = derive2 { name="hgu133plus2CellScore"; version="1.24.0"; sha256="0akf6y1pwjiffhxgd2s01kmw4aylbfbh9hv8yyfvm3r72j07lbvs"; depends=[Biobase]; };
hgu133plus2barcodevecs = derive2 { name="hgu133plus2barcodevecs"; version="1.42.0"; sha256="0d6jcyb1v58f1p76mng0l327v6i1cskrgcj4p2r9z2pjbgyicgq2"; depends=[]; };
hgu2beta7 = derive2 { name="hgu2beta7"; version="1.44.0"; sha256="0wlkv4yppzg520zbhk7v19jfxbiran9di0bm10bfb9lizdszwd75"; depends=[]; };
homosapienDEE2CellScore = derive2 { name="homosapienDEE2CellScore"; version="1.0.0"; sha256="1vwasylfqv4xgmhkzykdwhlxh0kk4pl4bcndx5dpn7i386zp6chs"; depends=[BiocGenerics DESeq2 ExperimentHub getDEE2 MatrixGenerics Rtsne S4Vectors SummarizedExperiment]; };
humanStemCell = derive2 { name="humanStemCell"; version="0.44.0"; sha256="0yr4z1j4xaxaby3ka9k6h5bshzn78ymp0ic0ycblbl6zzr0vzym2"; depends=[Biobase hgu133plus2_db]; };
imcdatasets = derive2 { name="imcdatasets"; version="1.12.0"; sha256="135sffkn322g6zp6wz6ri2cg4wj9pwadmv4b6zaaxwximpx5xy04"; depends=[cytomapper DelayedArray ExperimentHub HDF5Array S4Vectors SingleCellExperiment SpatialExperiment]; };
kidpack = derive2 { name="kidpack"; version="1.46.0"; sha256="0802kn1n9ivjil19faphg4z4iy0y7n1hmixd9bkfv7livfl8yn0b"; depends=[Biobase]; };
leeBamViews = derive2 { name="leeBamViews"; version="1.40.0"; sha256="15prksw8pi302i8qpw3skwljyj3hfm9wld2lzpcgz7nnpzrqm8bc"; depends=[Biobase BSgenome GenomicAlignments GenomicRanges IRanges Rsamtools S4Vectors]; };
leukemiasEset = derive2 { name="leukemiasEset"; version="1.40.0"; sha256="0r5dmd9m8fcbdns3r1vsw4xmxdbjp5gf4klsb148rpgmp5avjar4"; depends=[Biobase]; };
lumiBarnes = derive2 { name="lumiBarnes"; version="1.44.0"; sha256="0in8rkcg1r7mjq3fzhyc8446dc09b1mm371vd6l0x541sj7x4n50"; depends=[Biobase lumi]; };
lungExpression = derive2 { name="lungExpression"; version="0.42.0"; sha256="1r4xn6r0vwnkfbi49gjrxgdscqdpwpfwzb61mrxa9m1hgjy1dr80"; depends=[Biobase]; };
lydata = derive2 { name="lydata"; version="1.30.0"; sha256="1f13r5krfqc2f4gc03dxk8ajxlm62yxif03m0nx8lqxvijgm4abq"; depends=[]; };
mCSEAdata = derive2 { name="mCSEAdata"; version="1.24.0"; sha256="0364bvsx286nsnyp5mh2i7i71dpdlpgn0907hnpxck1hcw19npnn"; depends=[GenomicRanges]; };
macrophage = derive2 { name="macrophage"; version="1.20.0"; sha256="11ydl4srfxbcqnb42kwk783xd74231g6vgp1f0qs3hl8slc1hk1w"; depends=[]; };
mammaPrintData = derive2 { name="mammaPrintData"; version="1.40.0"; sha256="1vna6vg7md9pl9hfrvbb4pi2rpnm0pm9l3ndh8ifdhqrz2vjhfpz"; depends=[]; };
maqcExpression4plex = derive2 { name="maqcExpression4plex"; version="1.48.0"; sha256="086pkn4x1nr7qqhawhyxdcrh9pnsqdpfgy07zxyf1i2by3b7b0v9"; depends=[]; };
marinerData = derive2 { name="marinerData"; version="1.4.0"; sha256="1blrqzi840vcvdslyxkljbc2ihbx7yvvfxmxcs2kq8590jagl425"; depends=[ExperimentHub]; };
mcsurvdata = derive2 { name="mcsurvdata"; version="1.22.0"; sha256="1pf4vljmfbks31rdhb1088x2lyck5bj1a5ci1z6qam8yi4kzgh1y"; depends=[AnnotationHub Biobase ExperimentHub]; };
metaMSdata = derive2 { name="metaMSdata"; version="1.40.0"; sha256="12x7p2jyzggjfb7v2ax9by5hly84jjkkm6fq3i2ycyryjl8f0p6s"; depends=[]; };
methylclockData = derive2 { name="methylclockData"; version="1.12.0"; sha256="1bwrgib7k71i4i6iq4l71n0z9adq3bg9k8j10bpi79ygn9169np5"; depends=[ExperimentHub ExperimentHubData]; };
miRNATarget = derive2 { name="miRNATarget"; version="1.42.0"; sha256="1l8k9j7gwmg5ml68j0rj903im8q74ksanzfarwcx0hdxx4srsv2j"; depends=[Biobase]; };
miRcompData = derive2 { name="miRcompData"; version="1.34.0"; sha256="17cg4j5lgn5wf0dcrb71sqf8amkjql5zgvjr85szxlzimkjykfyd"; depends=[]; };
microRNAome = derive2 { name="microRNAome"; version="1.26.0"; sha256="0ry0pi7gcdwgfij7sw96pv9krqyq1lx5n81c1prhla45q26w9zpc"; depends=[SummarizedExperiment]; };
microbiomeDataSets = derive2 { name="microbiomeDataSets"; version="1.12.0"; sha256="0ng0sbdn3y2h7dyn42rq5ci12xx5y3hqb87n7xi7lc1gp1pcxcf2"; depends=[ape BiocGenerics Biostrings ExperimentHub MultiAssayExperiment SummarizedExperiment TreeSummarizedExperiment]; };
minfiData = derive2 { name="minfiData"; version="0.50.0"; sha256="1myxv7cqh7d1rjav9qhwqsmw3s1xh3zm34vbxwprqaqg87dg4bw0"; depends=[IlluminaHumanMethylation450kanno_ilmn12_hg19 IlluminaHumanMethylation450kmanifest minfi]; };
minfiDataEPIC = derive2 { name="minfiDataEPIC"; version="1.30.0"; sha256="1sgcw9gdlgk6dyzw61c0k2q26w7vzbqzyrl5qimx466x76knz4hj"; depends=[IlluminaHumanMethylationEPICanno_ilm10b2_hg19 IlluminaHumanMethylationEPICmanifest minfi]; };
minionSummaryData = derive2 { name="minionSummaryData"; version="1.34.0"; sha256="0mmj48c1djl026g7ckn5k7shvyy7xa0fp7nsavm15a8l4blbq1ri"; depends=[]; };
mosaicsExample = derive2 { name="mosaicsExample"; version="1.42.0"; sha256="0sy85jkl5z82a7y3fg8a1mfq5cpjq2c5arvwplz427rsi02ppqan"; depends=[]; };
mouse4302barcodevecs = derive2 { name="mouse4302barcodevecs"; version="1.42.0"; sha256="1bdcfbjpz60fldj8xq3hwgvdqmv5axc8cl2l57i4xk4piggah22r"; depends=[]; };
msPurityData = derive2 { name="msPurityData"; version="1.32.0"; sha256="0pbdx6pg3cdwx6qngn01w46bvvqv2hhyicgi39y182gbwliv0fxl"; depends=[]; };
msd16s = derive2 { name="msd16s"; version="1.24.0"; sha256="16ska3qh5bav3y891gz805pj638j4kx73izv8krpqgpycin719ar"; depends=[Biobase metagenomeSeq]; };
msdata = derive2 { name="msdata"; version="0.44.0"; sha256="0g7mlgks3nfnfipnybs7pvsnmrvmq8888g39badca8pi73q1cm25"; depends=[]; };
msigdb = derive2 { name="msigdb"; version="1.12.0"; sha256="080wm9sjwqhaxqx1r3kly1bi1gvkssqpsadnvabx11w493356qr0"; depends=[AnnotationDbi AnnotationHub ExperimentHub GSEABase org_Hs_eg_db org_Mm_eg_db]; };
msqc1 = derive2 { name="msqc1"; version="1.32.0"; sha256="1wac6i792ndmv98rb3k7pz07q4l830yhkfs89ahlcalrah6m9cld"; depends=[lattice]; };
mtbls2 = derive2 { name="mtbls2"; version="1.34.0"; sha256="0bycprz32ihj7kzy5f31275sd4b855nd9vm34447x5y33wdiq9b9"; depends=[]; };
muleaData = derive2 { name="muleaData"; version="1.0.0"; sha256="0n5q0whp2fad980b72b9z85swkm8dc2r888javkzhb5c9sajz1w0"; depends=[]; };
multiWGCNAdata = derive2 { name="multiWGCNAdata"; version="1.2.0"; sha256="1hpm0hf8yh3308rlfcm5f9hi1mcwgcij1baikrx4nrwn7fgi30l3"; depends=[ExperimentHub]; };
muscData = derive2 { name="muscData"; version="1.18.0"; sha256="1snpzvmxrpzspfl5gy18w2mcdpszq7wn2l3z1mbvjdp8ffh4qv00"; depends=[ExperimentHub SingleCellExperiment]; };
mvoutData = derive2 { name="mvoutData"; version="1.40.0"; sha256="01rxr4867w2zcy4gmcg868g2xqal5vb4xw2izfmcwplxah5380wv"; depends=[affy Biobase lumi]; };
nanotubes = derive2 { name="nanotubes"; version="1.20.0"; sha256="0gsgs0i3117753pxypr2q8pc3zc8bd3fkp5xj30jx142wvi4y0al"; depends=[]; };
nullrangesData = derive2 { name="nullrangesData"; version="1.10.0"; sha256="099ynygy9ld7ckzh38rf5nglx70mjwha0jz3ngn85ncnaz64cw26"; depends=[ExperimentHub GenomicRanges InteractionSet]; };
oct4 = derive2 { name="oct4"; version="1.20.0"; sha256="0q6q5zg33fxq9cjnxdbc53q4wqsqcgid8ax0z2b8sbyv86knj620"; depends=[]; };
octad_db = derive2 { name="octad.db"; version="1.6.0"; sha256="1n8zwjhf7s61gaqr1zs5gvc5l3xsbzilj38lpsh8k80y175msgbx"; depends=[ExperimentHub]; };
optimalFlowData = derive2 { name="optimalFlowData"; version="1.16.0"; sha256="0b5r3hqs2pnj2s9qizrqpkkidq3r5ig75rmk1ygsppad0dl98qyh"; depends=[]; };
orthosData = derive2 { name="orthosData"; version="1.2.0"; sha256="000jqijl7mpp0qfgg0aqx7jzn5bviybp2ndxmikyn0rmcvi9057k"; depends=[AnnotationHub BiocFileCache ExperimentHub HDF5Array stringr SummarizedExperiment]; };
pRolocdata = derive2 { name="pRolocdata"; version="1.42.0"; sha256="0drc8srg2frzjpq7j00pfr1371n0jiry5gz1rz2hbagcz2q51aad"; depends=[Biobase MSnbase]; };
parathyroidSE = derive2 { name="parathyroidSE"; version="1.42.0"; sha256="183cyn1i0i2p8npajwmbwzr2ncrrzwgpvh8adhjxzrdqkn3qdnr5"; depends=[SummarizedExperiment]; };
pasilla = derive2 { name="pasilla"; version="1.32.0"; sha256="0r5i64125qq5z4c8zliazsi68035d1bsz6ingzqdh37m8prdw1cr"; depends=[DEXSeq]; };
pasillaBamSubset = derive2 { name="pasillaBamSubset"; version="0.42.0"; sha256="0q0wawb4hj45lm9z8h0q905dvmx13x25cv64qmm1nf0342m8gccn"; depends=[]; };
pcxnData = derive2 { name="pcxnData"; version="2.25.0"; sha256="1mlqkxlkqfb8x5jp2fdx5nfrpfh8g3lghfj6sqkaf958n5yl1dg3"; depends=[]; };
pd_atdschip_tiling = derive2 { name="pd.atdschip.tiling"; version="0.42.0"; sha256="17sf3x7mhkjk605hmc0idx1d3pbx49hyfaxzifkc6bq1mmq5113x"; depends=[Biostrings DBI IRanges oligo oligoClasses RSQLite S4Vectors]; };
pepDat = derive2 { name="pepDat"; version="1.24.0"; sha256="01svdmjhijbmjypp9hzninmagjl24zk4kjigmrjiasfski8yjln5"; depends=[GenomicRanges]; };
plotgardenerData = derive2 { name="plotgardenerData"; version="1.10.0"; sha256="14y5hh4r7j7kkbh7kl6wwh6xyva9pbqxzz4ch7dp7p0kj5kgh52s"; depends=[]; };
prebsdata = derive2 { name="prebsdata"; version="1.40.0"; sha256="0agdmcin4mqigrpm004wvaqd9ciy2kc7di1yiycgdnd4ccglhllk"; depends=[]; };
preciseTADhub = derive2 { name="preciseTADhub"; version="1.12.0"; sha256="0449ppjh29rwykf5i2c8f8sfy9s87p2kxgvylfa016x3g2gbnygw"; depends=[ExperimentHub]; };
prostateCancerCamcap = derive2 { name="prostateCancerCamcap"; version="1.32.0"; sha256="03pfci7cx5r2lagfzi0j8b2ry9s6c211qamfqlqrx5siw0yxllrx"; depends=[Biobase]; };
prostateCancerGrasso = derive2 { name="prostateCancerGrasso"; version="1.32.0"; sha256="11sl00lfi85gpwh2619w3z54vb0mw05bwcgdblg1c6wnrn17qd9h"; depends=[Biobase]; };
prostateCancerStockholm = derive2 { name="prostateCancerStockholm"; version="1.32.0"; sha256="02kcm3wvz4wrdnn4cfna67gqx7p8765j4j0cl7x08j7qjlnsnq2z"; depends=[Biobase]; };
prostateCancerTaylor = derive2 { name="prostateCancerTaylor"; version="1.32.0"; sha256="1ynjyrcp7d8ywzlfkv2909r1l3ihap4yiamq0jrqa27xh6lvpqfd"; depends=[Biobase]; };
prostateCancerVarambally = derive2 { name="prostateCancerVarambally"; version="1.32.0"; sha256="1f0wzm4hlax0dcx3ibssiq1nmli8zhrp7b2r1znjs38v2p5skx53"; depends=[Biobase]; };
ptairData = derive2 { name="ptairData"; version="1.12.0"; sha256="1w7j8zx0x0kihsv295l389vlxii72z22gyi2mhdfviyay7g4n2gd"; depends=[rhdf5 signal]; };
pumadata = derive2 { name="pumadata"; version="2.40.0"; sha256="0ryrlsfyc64kbcn6mhq5xv09n9dv58d6azhywx21kg01iayrmnvb"; depends=[Biobase oligo puma]; };
qPLEXdata = derive2 { name="qPLEXdata"; version="1.22.0"; sha256="1a8mzbll0s9w82y4sy153jna6677sdpp3bfzs83qaqpnjymjzfpc"; depends=[dplyr knitr MSnbase qPLEXanalyzer]; };
rRDPData = derive2 { name="rRDPData"; version="1.24.0"; sha256="030hnp9sghl0f2wfg243ll6myp9gr5zzbwlfzaz8m7q8xk2if363"; depends=[rRDP]; };
raerdata = derive2 { name="raerdata"; version="1.2.0"; sha256="15j7sw3kvgqqb7m4y4kn40p8g8s1f204lfnb5zskkjfakj6c2j03"; depends=[BiocGenerics ExperimentHub Rsamtools rtracklayer SingleCellExperiment]; };
rcellminerData = derive2 { name="rcellminerData"; version="2.26.0"; sha256="1al3v586q2ak77hjbl3xlvrxqs3xid8y06lf601c5diyrd7vp7r7"; depends=[Biobase]; };
restfulSEData = derive2 { name="restfulSEData"; version="1.26.0"; sha256="17ia2d5g0zawfpcqvpncw05qshhn09p05j2frxmz0mwjfp7mya27"; depends=[DelayedArray ExperimentHub HDF5Array SummarizedExperiment]; };
rheumaticConditionWOLLBOLD = derive2 { name="rheumaticConditionWOLLBOLD"; version="1.42.0"; sha256="0s75faby72cv6i1y1mj5d3qfvfp6907jinnfm17zvgdvcl0xx06h"; depends=[]; };
sampleClassifierData = derive2 { name="sampleClassifierData"; version="1.28.0"; sha256="0bjncqk3h11gcsg8zp64f22xjsbgr20dqangg7h84d9m0rr6x0kg"; depends=[SummarizedExperiment]; };
scATAC_Explorer = derive2 { name="scATAC.Explorer"; version="1.10.0"; sha256="0s2w9b9bb1bzqnlhlrgvp17bifhryvymzaid02ypkqaql06d6nyx"; depends=[BiocFileCache data_table Matrix S4Vectors SingleCellExperiment]; };
scMultiome = derive2 { name="scMultiome"; version="1.4.0"; sha256="1fiivxs35zanssfkjv83fa898fjr93xgq5g2i9m2qkv2pxqlyan8"; depends=[AnnotationHub AzureStor checkmate DelayedArray ExperimentHub GenomicRanges HDF5Array MultiAssayExperiment rhdf5 S4Vectors SingleCellExperiment SummarizedExperiment]; };
scRNAseq = derive2 { name="scRNAseq"; version="2.18.0"; sha256="0jsq037ba4xsb3bwwf021jw2hqv30vb5nrjag97xadx75z5fzqlr"; depends=[alabaster_base alabaster_matrix alabaster_sce AnnotationDbi AnnotationHub BiocGenerics DBI DelayedArray ensembldb ExperimentHub GenomicFeatures GenomicRanges gypsum jsonlite Matrix RSQLite S4Vectors SingleCellExperiment SparseArray SummarizedExperiment]; };
scTHI_data = derive2 { name="scTHI.data"; version="1.16.0"; sha256="03zixwlainshb8q3jsb6w9vah790vq17p742fpa2h8f0vcamqxa4"; depends=[]; };
scaeData = derive2 { name="scaeData"; version="1.0.0"; sha256="0ghd2qyc9kz2d0g0whdy7cpys7j265iq9w7a02mnfwk8s0vplrk5"; depends=[ExperimentHub]; };
scanMiRData = derive2 { name="scanMiRData"; version="1.10.0"; sha256="1h7bla3l5mmydwz6pgq6ja560r02i741k0259f3a5lf07y4rdab6"; depends=[scanMiR]; };
scpdata = derive2 { name="scpdata"; version="1.12.0"; sha256="1mn3a27wmdsn582v6ajavn2fxqqqlv79zyy40zfg6pnza19izpbx"; depends=[AnnotationHub ExperimentHub QFeatures S4Vectors SingleCellExperiment]; };
seq2pathway_data = derive2 { name="seq2pathway.data"; version="1.36.0"; sha256="0i45qxvbirh4l048a2hzk9iahydsgk6az0yjlfsypa0zq6hcz3cj"; depends=[]; };
seqc = derive2 { name="seqc"; version="1.38.0"; sha256="0g1zwzm38xqdpzfhpbwlw8zcdl8lvyd7pfncgwk7y50w1mblxqah"; depends=[Biobase]; };
serumStimulation = derive2 { name="serumStimulation"; version="1.40.0"; sha256="1lkwx3gc7c6scznaf1z62szi4mb944dg1jprp8zlmm51a73w9kp9"; depends=[]; };
sesameData = derive2 { name="sesameData"; version="1.22.0"; sha256="05k67isysszzfkkbi811dkab0cmxnwz81p2ldcqz3gsq5qin3p1g"; depends=[AnnotationHub ExperimentHub GenomeInfoDb GenomicRanges IRanges readr S4Vectors stringr]; };
seventyGeneData = derive2 { name="seventyGeneData"; version="1.40.0"; sha256="0yy9pywbr5fjkjc2gaaf8cfw5q2barw1a3yin99a7sphq062lfvj"; depends=[]; };
shinyMethylData = derive2 { name="shinyMethylData"; version="1.24.0"; sha256="17l63xmdi6zhaqggw45nhpiclag96xjbkngmcqhihfykkrgbb18p"; depends=[]; };
signatureSearchData = derive2 { name="signatureSearchData"; version="1.18.0"; sha256="11y1dbixj9b91whzq4lrmad5f4f6gqdv70ar4rg20ql1699dx5l5"; depends=[affy Biobase dplyr ExperimentHub limma magrittr R_utils rhdf5]; };
simpIntLists = derive2 { name="simpIntLists"; version="1.40.0"; sha256="03d7whna1h2ffgci060gqfdwbjwmjg6q3yfd8l6vc25kiblc4igp"; depends=[]; };
smokingMouse = derive2 { name="smokingMouse"; version="1.2.0"; sha256="1z3kbmlqylmaingkcdm6wxlx848zipqfh6kha7f55s6aklgcv5d7"; depends=[]; };
spatialDmelxsim = derive2 { name="spatialDmelxsim"; version="1.10.0"; sha256="172hgg2wxjc32950lga8fqwygd6x07i0ilsvfp46sd7nmysy6cpn"; depends=[ExperimentHub SummarizedExperiment]; };
spatialLIBD = derive2 { name="spatialLIBD"; version="1.16.2"; sha256="0bbwh9mfz7iscv8a1jlc7g1c452hv4qr95hwv3z6h2mqf8pcr5g8"; depends=[AnnotationHub benchmarkme BiocFileCache BiocGenerics cowplot DT edgeR ExperimentHub fields GenomicRanges ggplot2 golem IRanges jsonlite limma magick Matrix MatrixGenerics paletteer plotly png RColorBrewer rlang rtracklayer S4Vectors scater scuttle sessioninfo shiny shinyWidgets SingleCellExperiment SpatialExperiment statmod SummarizedExperiment tibble viridisLite]; };
spqnData = derive2 { name="spqnData"; version="1.16.0"; sha256="047dbhcfqs0zddmnfpabpjhym86m5zlxnwccidkx0b131wxb22gv"; depends=[SummarizedExperiment]; };
stemHypoxia = derive2 { name="stemHypoxia"; version="1.40.0"; sha256="0i8rvz2l6hgzd4zcmfzszjck0riy2m34qf2nidrxx6bjza4iqwpy"; depends=[]; };
synapterdata = derive2 { name="synapterdata"; version="1.42.0"; sha256="0p6rrnqvdifrajil2akjvrzjm1k7gyywspg5cb5p2k62lyz0f06k"; depends=[synapter]; };
systemPipeRdata = derive2 { name="systemPipeRdata"; version="2.8.0"; sha256="131p4s5cgm75f32a5dzyj059aznxjcy76h7h8dbccblqlqxgx1ix"; depends=[BiocGenerics Biostrings jsonlite remotes]; };
tartare = derive2 { name="tartare"; version="1.18.0"; sha256="1wxq6sfzdah29ql9q7w3d35x7bf1bh1417ih55rg07qbs8cnxb9v"; depends=[AnnotationHub ExperimentHub]; };
timecoursedata = derive2 { name="timecoursedata"; version="1.14.0"; sha256="0wjfc5awj4spvwwj3mp1bn3dqngjdnfz7bnlv7azqxmnd4q72ckr"; depends=[SummarizedExperiment]; };
tinesath1cdf = derive2 { name="tinesath1cdf"; version="1.42.0"; sha256="0anb8n6kni2i56rhhd6wlvq7am6jifiqfmm6v54yh96i2m3gsbq9"; depends=[]; };
tinesath1probe = derive2 { name="tinesath1probe"; version="1.42.0"; sha256="0jcjzgazj3z4ls2b0mhi15n1vh4adxv2ysm6x3r8w4a4hzm4gnmg"; depends=[AnnotationDbi]; };
tissueTreg = derive2 { name="tissueTreg"; version="1.24.0"; sha256="0wv7hlq4v69gwypg9lvkcxf7w191iq8j5rzh2gqvg25ajxhm0bwl"; depends=[]; };
tofsimsData = derive2 { name="tofsimsData"; version="1.32.0"; sha256="02svkikiw72lpnsm3w333py7gwc52qi3qina215rp7fknrsqrw07"; depends=[]; };
topdownrdata = derive2 { name="topdownrdata"; version="1.26.0"; sha256="13vcis52fadfpahw31v2z3p2q47d4yp7yl719mibkwga9iyklgva"; depends=[topdownr]; };
tuberculosis = derive2 { name="tuberculosis"; version="1.10.0"; sha256="1l9gm8jlvall905053mmbn0wd053ssnsxy74gza37w669il85awn"; depends=[AnnotationHub dplyr ExperimentHub magrittr purrr rlang S4Vectors stringr SummarizedExperiment tibble tidyr]; };
tweeDEseqCountData = derive2 { name="tweeDEseqCountData"; version="1.42.0"; sha256="01cgv28yyqjg8f86dskafb3xy4ylcl4schcad44f9jpvc6zk48qs"; depends=[Biobase]; };
tximportData = derive2 { name="tximportData"; version="1.32.0"; sha256="15wy0dhs9sbz27ii64b4i0zxlsm6v75m2f32gisdy9f6gnbgwkjg"; depends=[]; };
vulcandata = derive2 { name="vulcandata"; version="1.26.0"; sha256="13cdb630w1xy734h15dgpzzk64g1rpr5xwh9q2hvs1z3ljyws8qd"; depends=[]; };
xcoredata = derive2 { name="xcoredata"; version="1.8.0"; sha256="0sn3h2c0h9jpdp17jcxskcqjy31vx6wz2d5xb98ag19cfbimv3nl"; depends=[ExperimentHub]; };
yeastCC = derive2 { name="yeastCC"; version="1.44.0"; sha256="1y3k3dvxrv68pcsdqhyvhxvwnmhm0iv7yr3rc6b0gm8g2nv9kcqm"; depends=[Biobase]; };
yeastExpData = derive2 { name="yeastExpData"; version="0.50.0"; sha256="1ila3h87j9l37nvwhabrayxawx3mcklhlr3y9cqzpwkg7iayrplf"; depends=[graph]; };
yeastGSData = derive2 { name="yeastGSData"; version="0.42.0"; sha256="1m3hrjmibmp8zzcc6acg6m21zq83rpnclya4ivivj60nw6ardbkr"; depends=[]; };
yeastNagalakshmi = derive2 { name="yeastNagalakshmi"; version="1.40.0"; sha256="16n48lcyl63cmlc796xizf19rmm5qmdic0msaadz12wh743phh3a"; depends=[]; };
yeastRNASeq = derive2 { name="yeastRNASeq"; version="0.42.0"; sha256="1jk6451ypys3xskmlm6xpvjxxzrx1g0hnzfcsahf3gqgg63pfj7h"; depends=[]; };
zebrafishRNASeq = derive2 { name="zebrafishRNASeq"; version="1.24.1"; sha256="0khmilw21jnq2ivl7bh7fwz9nxlphljl5fh4w28q9gzydrv0vxci"; depends=[]; };
ABAData = derive2 { name="ABAData"; version="1.24.0"; sha256="1wgniq7ibvjj6dx63ixr3i5yclqmg94qpifzfbzzn9yjj3wnikzr"; depends=[]; broken = true; };
ChIC_data = derive2 { name="ChIC.data"; version="1.22.0"; sha256="1akqpqw9ydf23whr346psciyyp9c3r0rsas1rkdkf8g5wrcj9vhk"; depends=[caret genomeIntervals randomForest]; broken = true; };
DREAM4 = derive2 { name="DREAM4"; version="1.31.0"; sha256="11ypc84agvq0q0v7bk0b25cm48awxay5hhhjd95gw9s7jk196i2p"; depends=[SummarizedExperiment]; broken = true; };
MAQCsubsetAFX = derive2 { name="MAQCsubsetAFX"; version="1.30.0"; sha256="14mwg96g7aza81vc3hpmb41scmygl8vnsi6s8p48c8v92106asmb"; depends=[affy Biobase]; broken = true; };
MAQCsubsetILM = derive2 { name="MAQCsubsetILM"; version="1.40.0"; sha256="1bb158bmy7195wnj0wap08g621xbzflvj30pv4l7mwc54lm1vqfx"; depends=[Biobase lumi]; broken = true; };
MIGSAdata = derive2 { name="MIGSAdata"; version="1.24.0"; sha256="1s7fyf8n86a3znacjjs0zf22amw4rlgnvw2idld0np0yz81ggzs2"; depends=[]; broken = true; };
MSstatsBioData = derive2 { name="MSstatsBioData"; version="1.13.0"; sha256="1jzypgfmd6d0fdj9ycp4jwihjpxyinr5kwi2x2dg2z6hvxx97gb8"; depends=[]; broken = true; };
RNASeqRData = derive2 { name="RNASeqRData"; version="1.16.0"; sha256="17c5fvyqxdsg7wl0hy0i28z0kf2lmjg36lfrmsv51kzklsc6ykrp"; depends=[]; broken = true; };
SCATEData = derive2 { name="SCATEData"; version="1.10.0"; sha256="0p0y8mkcg99dpwvp7spxx047kyr7mdflnnlfpb4i232q0yxz2z03"; depends=[ExperimentHub GenomicAlignments GenomicRanges]; broken = true; };
alpineData = derive2 { name="alpineData"; version="1.26.0"; sha256="1337y1y8q5y8yh2r2bji8fz3nhcxbn5s6pfnnkb8kvg8r0avgmkz"; depends=[AnnotationHub ExperimentHub GenomicAlignments]; broken = true; };
brainImageRdata = derive2 { name="brainImageRdata"; version="1.12.0"; sha256="072x7yn1ambf6hfpir6qdxl8bybv64blpbi1jdp0bvqlk66zs7zv"; depends=[ExperimentHub]; broken = true; };
ccTutorial = derive2 { name="ccTutorial"; version="1.40.0"; sha256="1rqblyk7389xqwzvib2xjyjrc8l3qd2g8z9vj96mrfyr8dpccjjs"; depends=[affy Biobase Ringo topGO]; broken = true; };
gatingMLData = derive2 { name="gatingMLData"; version="2.38.0"; sha256="1dhm48nrh1y0x6p50045cn6f21bg35i0b4z7bjymn9aw0n9r5fyk"; depends=[]; broken = true; };
mAPKLData = derive2 { name="mAPKLData"; version="1.34.0"; sha256="0vhysi7wyw7d3vbq4qcq3i3ic953awppg2bix40ywz1459b5p43g"; depends=[]; broken = true; };
plasFIA = derive2 { name="plasFIA"; version="1.26.0"; sha256="0vbqjbfc75pb2gk49sl6aihmvcc38ylngyr1bgdvdxr0xh11imv0"; depends=[proFIA]; broken = true; };
ppiData = derive2 { name="ppiData"; version="0.34.0"; sha256="10xbp12wim5kj1h2vkxn9x22fd92s2038w653y81jwbh2hyidybf"; depends=[AnnotationDbi graph]; broken = true; };
pwrEWAS_data = derive2 { name="pwrEWAS.data"; version="1.14.0"; sha256="1bldyvjsv5wwzasg9sbsivyi7m2ypc17mqjglsl22fjkykm92h4s"; depends=[ExperimentHub]; broken = true; };
seqCNA_annot = derive2 { name="seqCNA.annot"; version="1.38.0"; sha256="0kzmn5hx8ag02pz8b78cq7dbalw2w60y441cjyyvxjgycwcfvmvj"; depends=[]; broken = true; };
stjudem = derive2 { name="stjudem"; version="1.42.0"; sha256="0pcvvvaqalr5jklqy7vzxkp0cd9nj9dk941drgr7ndbqc2navz2c"; depends=[]; broken = true; };
tcgaWGBSData_hg19 = derive2 { name="tcgaWGBSData.hg19"; version="1.12.0"; sha256="1kmh4iyh2h7vc1mlwb3sridn4nwkqdschz5md5dk53mxkn2wxcmi"; depends=[bsseq ExperimentHub knitr]; broken = true; };
}

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pkgs/development/r-modules/default.nix
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@ -1,4 +1,13 @@
/* This file defines the composition for CRAN (R) packages. */
/* This file defines the composition for R packages. */
let
importJSON = f: builtins.fromJSON (builtins.readFile f);
biocPackagesGenerated = importJSON ./bioc-packages.json;
biocAnnotationPackagesGenerated = importJSON ./bioc-annotation-packages.json;
biocExperimentPackagesGenerated = importJSON ./bioc-experiment-packages.json;
cranPackagesGenerated = importJSON ./cran-packages.json;
in
{ R, pkgs, overrides }:
@ -46,7 +55,7 @@ let
# from the name, version, sha256, and optional per-package arguments above
#
deriveBioc = mkDerive {
mkHomepage = {name, biocVersion, ...}: "https://bioconductor.org/packages/${biocVersion}/bioc/html/${name}.html";
mkHomepage = {name, biocVersion}: "https://bioconductor.org/packages/${biocVersion}/bioc/html/${name}.html";
mkUrls = {name, version, biocVersion}: [
"mirror://bioc/${biocVersion}/bioc/src/contrib/${name}_${version}.tar.gz"
"mirror://bioc/${biocVersion}/bioc/src/contrib/Archive/${name}/${name}_${version}.tar.gz"
@ -68,7 +77,7 @@ let
hydraPlatforms = [];
};
deriveCran = mkDerive {
mkHomepage = {name, ...}: "https://cran.r-project.org/web/packages/${name}/";
mkHomepage = {name}: "https://cran.r-project.org/web/packages/${name}/";
mkUrls = {name, version}: [
"mirror://cran/${name}_${version}.tar.gz"
"mirror://cran/Archive/${name}/${name}_${version}.tar.gz"
@ -287,10 +296,18 @@ let
# packages in `_self` may depends on overridden packages.
self = (defaultOverrides _self self) // overrides;
_self = { inherit buildRPackage; } //
import ./bioc-packages.nix { inherit self; derive = deriveBioc; } //
import ./bioc-annotation-packages.nix { inherit self; derive = deriveBiocAnn; } //
import ./bioc-experiment-packages.nix { inherit self; derive = deriveBiocExp; } //
import ./cran-packages.nix { inherit self; derive = deriveCran; };
mkPackageSet deriveBioc biocPackagesGenerated //
mkPackageSet deriveBiocAnn biocAnnotationPackagesGenerated //
mkPackageSet deriveBiocExp biocExperimentPackagesGenerated //
mkPackageSet deriveCran cranPackagesGenerated;
# Takes in a generated JSON file's imported contents
# and transforms it by swapping each element of the depends array with the dependency's derivation
# and passing this new object to the provided derive function
mkPackageSet = derive: packagesJSON: lib.mapAttrs (
k: v: derive packagesJSON.extraArgs (v // { depends = lib.map (name: builtins.getAttr name self) v.depends; })
) packagesJSON.packages;
# tweaks for the individual packages and "in self" follow