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192,324 Commits 182 Branches 125 Tags 6.2 GiB
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Commit Graph

2907 Commits

Author SHA1 Message Date
Michael Raskin
4149a662a7 petrinizer: fix build by pinning the neccessary library versions 2019-09-07 13:33:50 +03:00
Frederik Rietdijk
66bc7fc1b3 Merge master into staging-next 2019-09-06 22:46:05 +02:00
Justin Bedo
6beabe7d2c bedtools: 2.28.0 -> 2.29.0 2019-09-06 21:23:15 +02:00
Dmitry Kalinkin
d6264f9094
Merge pull request #65726 from smaret/gildas-20190801_a 
gildas: 20190701_a -> 20190901_a
 2019-09-06 11:15:45 -04:00
Jan Tojnar
cdf426488b
Merge branch 'master' into staging-next 
Fixed trivial conflicts caused by removing rec.
 2019-09-06 03:20:09 +02:00
Jan Tojnar
ed54a5b51d
Merge branch 'gtk-no-plus' 2019-09-06 02:57:51 +02:00
Jan Tojnar
72e7d569a7
tree-wide: s/GTK+/GTK/g 
GTK was renamed.
 2019-09-06 02:54:53 +02:00
Aaron Andersen
11de7aa609
Merge pull request #64322 from jbedo/xenomapper 
xenomapper: init 1.0.2
 2019-09-05 12:08:10 -04:00
Justin Bedo
3f83cbf538
xenomapper: init 1.0.2 2019-09-05 20:50:22 +10:00
Sébastien Maret
4f3eacc2bf
gildas: 20190701_a -> 20190901_a 2019-09-05 12:30:46 +02:00
Vladimír Čunát
4aad2947f8
Merge branch 'master' into staging-next 2019-09-04 11:00:56 +02:00
worldofpeace
59e68d3b74 treewide: don't use single quotes with placeholder 2019-09-03 13:01:42 -04:00
Ryan Mulligan
32f9c619f5
Merge pull request #67969 from petabyteboy/feature/remove-dobuild 
treewide: remove uses of doBuild and doConfigure
 2019-09-02 15:13:47 -07:00
Milan Pässler (work)
185fd61631 treewide: remove uses of doBuild and doConfigure 
doBuild and doConfigure are not actually used by any builders, they were
probably added by mistake and just confuse people.
 2019-09-02 23:42:12 +02:00
Vladimír Čunát
f21211ebfe
Merge branch 'master' into staging 2019-09-02 23:25:24 +02:00
Emily
d1dfaa79e3 symbiyosys: fix path to bash (again) 
/usr/bin/env works on NixOS normally, but previously sby would fail if
used from inside the Nix sandbox.
 2019-09-01 14:22:49 -05:00
Tadeo Kondrak
2aa9b655f4
kallisto: 0.43.1 -> 0.46.0 2019-08-31 14:06:31 -06:00
Frederik Rietdijk
98ef78326d Merge staging-next into staging 2019-08-31 18:07:33 +02:00
Frederik Rietdijk
96e5474329 Merge master into staging-next 2019-08-31 18:04:31 +02:00
Alyssa Ross
1da1a7a479 pari: 2.11.1 -> 2.11.2 2019-08-31 13:33:00 +00:00
Niklas Hambüchen
9e78f76ade treewide: Remove unnecessary --disable-static (#66759) 
* freetype: Remove unnecessary `--disable-static`.

The true-by-default `dontDisableStatic` already takes care of it.

Fixes freetype not being overridable to have static libs.

* treewide: Remove unnecessary `--disable-static`.

The true-by-default `dontDisableStatic` already takes care of it.

Fixes these packages not being overridable to have static libs.
 2019-08-31 08:10:53 -04:00
Alexander
35ac3344e7 colmap: init at 3.5 (#67759) 
* colmap: init at 3.5
 2019-08-31 08:06:46 -04:00
volth
7bb6b373ab treewide: name -> pname (#67513) 2019-08-31 07:41:22 -04:00
Lassulus
a8d26fc34a
Merge pull request #63127 from bzizou/trimal 
trimal: init at 1.4.1
 2019-08-31 13:04:41 +02:00
Frederik Rietdijk
ad1d58c622 Merge staging-next into staging 2019-08-31 10:04:20 +02:00
Frederik Rietdijk
fc74ba8291 Merge master into staging-next 2019-08-31 09:50:38 +02:00
volth
08f68313a4 treewide: remove redundant rec 2019-08-28 11:07:32 +00:00
Frederik Rietdijk
5061fe0c2c Merge staging-next into staging 2019-08-28 08:26:42 +02:00
Léo Gaspard
8a4721d606
Merge pull request #64669 from luispedro/add_sortmerna 
sortmerna: init at 3.0.3
 2019-08-27 17:19:53 +02:00
Frederik Rietdijk
98640fd482 Merge master into staging-next 2019-08-27 16:36:47 +02:00
Luis Pedro Coelho
bc22c2e07f sortmerna: init at 3.0.3 
This is a useful package in bioinformatics, namely in processing
short-read sequencing data from metagenomes
 2019-08-27 00:37:43 +02:00
volth
35d68ef143 treewide: remove redundant quotes 2019-08-26 21:40:19 +00:00
Jonathan Ringer
6f279584fd stp: 2.2.0 -> 2.3.3 2019-08-26 14:00:48 -07:00
Vladimír Čunát
985d1ac425
Merge branch 'master' into staging-next 
There were several more conflicts from name -> pname+version;
all auto-solved by kdiff3, hopefully OK.

Hydra nixpkgs: ?compare=1538611
 2019-08-25 14:57:11 +02:00
Gabriel Ebner
440c63a38a vampire: 4.2.2 -> 4.4 2019-08-25 14:43:51 +02:00
Nikolay Amiantov
9015d7a4f1 sumorobot-manager: init at 0.9.0 2019-08-24 19:11:27 +03:00
Vladimír Čunát
2e6bf42a22
Merge branch 'master' into staging-next 
There ver very many conflicts, basically all due to
name -> pname+version.  Fortunately, almost everything was auto-resolved
by kdiff3, and for now I just fixed up a couple evaluation problems,
as verified by the tarball job.  There might be some fallback to these
conflicts, but I believe it should be minimal.

Hydra nixpkgs: ?compare=1538299
 2019-08-24 08:55:37 +02:00
Emily
05c54717f8 symbiyosys: extend platforms 2019-08-23 02:14:40 -05:00
Marek Mahut
44d43368cb
Merge pull request #67155 from r-ryantm/auto-update/tulip 
tulip: 5.1.0 -> 5.2.1
 2019-08-21 21:40:06 +02:00
R. RyanTM
187ec1a8c6 tulip: 5.1.0 -> 5.2.1 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/tulip/versions
 2019-08-20 19:45:43 -07:00
Marek Mahut
51980d6830
Merge pull request #67019 from r-ryantm/auto-update/picard-tools 
picard-tools: 2.20.4 -> 2.20.5
 2019-08-20 20:15:31 +02:00
R. RyanTM
41571dc81a picard-tools: 2.20.4 -> 2.20.5 
Semi-automatic update generated by
https://github.com/ryantm/nixpkgs-update tools. This update was made
based on information from
https://repology.org/metapackage/picard-tools/versions
 2019-08-19 21:40:40 -07:00
Marek Mahut
b8a9d33bcd
Merge pull request #66884 from markuskowa/upd-octopus 
octopus: 9.0 -> 9.1
 2019-08-19 11:53:01 +02:00
Marek Mahut
22aa7eadf1
Merge pull request #66871 from peterhoeg/f/apmplanner 
apmplanner2: fix build against qt 5.12
 2019-08-19 11:43:40 +02:00
Markus Kowalewski
a81bb36249
octopus: 9.0 -> 9.1 
* switch to GitLab download
* cleanup fftw dependence
 2019-08-19 10:24:44 +02:00
Peter Hoeg
374e0ad0a8 pulseview: use mkDerivation 2019-08-19 08:14:21 +02:00
Peter Hoeg
abbac2334b apmplanner2: fix build against qt 5.12 2019-08-19 14:01:55 +08:00
Frederik Rietdijk
f65aa21bb2 Merge master into staging-next 2019-08-18 12:53:44 +02:00
Vladimír Čunát
8ed485c67b
Merge #65948: tlaplusToolbox: 1.5.7 -> 1.6.0 2019-08-18 10:11:50 +02:00
Frederik Rietdijk
113dbfeb27
Merge pull request #66596 from emilazy/update-pypy-and-eda-tools 
Update PyPy and FOSS EDA tools
 2019-08-17 17:48:21 +02:00