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8229 Commits

Author SHA1 Message Date
markuskowa
212d454c2a
Merge pull request #246867 from markuskowa/add-mpi-hook 
add mpiCheckPhaseHook
 2023-08-26 11:54:56 +02:00
github-actions[bot]
e79f8fd118
Merge master into staging-next 2023-08-25 18:00:58 +00:00
Matthias Beyer
103bbccbf6
Merge pull request #251359 from r-ryantm/auto-update/iqtree 
iqtree: 2.2.2.6 -> 2.2.2.7
 2023-08-25 17:53:42 +02:00
R. Ryantm
e1b695a96f iqtree: 2.2.2.6 -> 2.2.2.7 2023-08-25 12:25:13 +00:00
github-actions[bot]
8680fe99a1
Merge master into staging-next 2023-08-25 12:01:24 +00:00
Doron Behar
582c821533
Merge pull request #251215 from alyaeanyx/qalculate-4.8.0 
{libqalculate, qalculate-gtk, qalculate-qt}: 4.7.0 -> 4.8.0
 2023-08-25 11:11:37 +00:00
R. Ryantm
d564dfa4d0 sambamba: 1.0.0 -> 1.0.1 2023-08-25 06:20:00 +00:00
github-actions[bot]
a11e7e3428
Merge master into staging-next 2023-08-25 06:00:56 +00:00
Samuel Ainsworth
c41b4c955e
Merge pull request #250779 from GaetanLepage/mujoco-update 
mujoco: 2.3.0 -> 2.3.7
 2023-08-24 20:20:35 -04:00
github-actions[bot]
d4c8d05cac
Merge master into staging-next 2023-08-25 00:01:49 +00:00
alyaeanyx
3d99e9b980 {libqalculate, qalculate-gtk, qalculate-qt}: 4.7.0 -> 4.8.0 2023-08-24 22:15:44 +02:00
Matthias Beyer
8573330e41
Merge pull request #251197 from r-ryantm/auto-update/cryptominisat 
cryptominisat: 5.11.11 -> 5.11.12
 2023-08-24 20:08:46 +02:00
github-actions[bot]
abaaf09a76
Merge master into staging-next 2023-08-24 18:00:52 +00:00
R. Ryantm
fcf9eb1b51 cryptominisat: 5.11.11 -> 5.11.12 2023-08-24 17:19:43 +00:00
R. Ryantm
df4f0605ce gerbv: 2.9.8 -> 2.10.0 2023-08-24 17:00:06 +00:00
Ben Wolsieffer
a2a7149af1 mavproxy: 1.8.62 -> 1.8.66 2023-08-24 12:28:51 -04:00
github-actions[bot]
4328391132
Merge master into staging-next 2023-08-24 12:01:05 +00:00
Theodore Ni
093f591dbc
Merge pull request #249849 from tjni/flatcam 
flatcam: do not pin setuptools in shapely
 2023-08-23 23:19:06 -07:00
github-actions[bot]
a451dcf514
Merge master into staging-next 2023-08-24 06:01:14 +00:00
Nick Cao
c5008e9a86
geogebra6: fix web archive url and darwin hash 2023-08-24 09:37:22 +08:00
Theodore Ni
003cfb2dc7
flatcam: do not pin setuptools in shapely 2023-08-23 17:46:21 -07:00
OTABI Tomoya
21943b1829
Merge pull request #248172 from alxsimon/bwa 
bwa-mem2: init at version 2.2.1
 2023-08-24 09:28:34 +09:00
Alexis Simon
556dac0725 bwa-mem2: init at version 2.2.1 
Co-authored-by: OTABI Tomoya <tomoya.otabi@gmail.com>
 2023-08-23 15:02:06 -07:00
github-actions[bot]
3e9e11f99a
Merge master into staging-next 2023-08-23 18:01:00 +00:00
markuskowa
3df4255e9e
Merge pull request #250973 from markuskowa/upd-ergoscf 
ergoscf: 3.8 -> 3.8.2
 2023-08-23 16:43:04 +02:00
Markus Kowalewski
dc963f7f2e ergoscf: 3.8 -> 3.8.2 2023-08-23 15:05:58 +02:00
github-actions[bot]
11e56ed9bb
Merge master into staging-next 2023-08-23 12:01:03 +00:00
Mauricio Collares
0ce130a11b
Merge pull request #250947 from collares/sage-gmp 
sage: import test fixes for gmp update
 2023-08-23 13:13:44 +02:00
Mauricio Collares
71e74a395b sage: import test fixes for gmp update 2023-08-23 12:09:01 +02:00
Nick Cao
201bbdbe7a
Merge pull request #250869 from r-ryantm/auto-update/cbmc 
cbmc: 5.89.0 -> 5.90.0
 2023-08-23 17:15:24 +08:00
natsukium
ae0bfcb156
viennarna: rename from ViennaRNA 2023-08-23 16:54:10 +09:00
Matthias Beyer
2f2a1073a7
Merge pull request #250742 from smaret/update/gildas 
gildas: 20230201_a -> 20230801_a
 2023-08-23 08:49:14 +02:00
Gaetan Lepage
ed86f377f2 mujoco: 2.3.0 -> 2.3.7 2023-08-23 07:40:17 +02:00
R. Ryantm
58a4a997db cbmc: 5.89.0 -> 5.90.0 2023-08-23 00:42:48 +00:00
kashw2
55774d1ef6 qucs-s: 1.1.0 -> 2.0.0 2023-08-23 10:20:54 +10:00
Markus Kowalewski
1534b6768e nwchem: use mpiCheckPhaseHook 2023-08-22 23:27:47 +02:00
Markus Kowalewski
b44960c4d9 cp2k: use mpiCheckPhaseHook 2023-08-22 23:27:47 +02:00
github-actions[bot]
1f6fb14d17
Merge staging-next into staging 2023-08-22 00:02:25 +00:00
Šimon Brandner
4920a168dc
geogebra6: 6-0-785-0 -> 6-0-794-0 
Signed-off-by: Šimon Brandner <simon.bra.ag@gmail.com>
 2023-08-21 21:27:51 +02:00
Sébastien Maret
a159d678ba gildas: 20230201_a -> 20230801_a 
- Update to the latest upstream version

 - Install only user binaries in bin/
 2023-08-21 16:51:40 +02:00
github-actions[bot]
56f5b9fafc
Merge staging-next into staging 2023-08-21 12:01:35 +00:00
OTABI Tomoya
325b09c1b5
Merge pull request #249878 from jbedo/last 
last: 1460 -> 1471
 2023-08-21 16:09:10 +09:00
Emery Hemingway
ed353dc721 mosdepth: build with Nim-2 2023-08-21 07:32:46 +01:00
Emery Hemingway
9025a583b1 nimPackages.hts: 0.3.4 -> 0.3.23, rename from hts-nim 2023-08-21 07:32:46 +01:00
github-actions[bot]
6eac46a06d
Merge staging-next into staging 2023-08-21 06:01:22 +00:00
figsoda
9fece688bc egglog: unstable-2023-08-09 -> unstable-2023-08-19 
Diff: de31786679...a4768b1751
 2023-08-20 15:59:22 -04:00
github-actions[bot]
435d3aef59
Merge staging-next into staging 2023-08-20 12:01:50 +00:00
Artturi
52d8a64da6
Merge pull request #249212 from Artturin/makewrapperevaler 2023-08-20 13:25:00 +03:00
Evils
37b8244412 kicad-unstable: 2023-06-24 -> 2023-08-15 2023-08-20 10:42:06 +02:00
Sergei Trofimovich
f434e83d62 angsd: pull patch pending upstream inclusion for parallel build fix 
Without the change rapallel builds fail occasionally as:

    $ make --shuffle -j
    ...
    g++ -c   -O3 -D__STDC_FORMAT_MACROS   argStruct.cpp
    g++ -c   -O3 -D__STDC_FORMAT_MACROS   ancestral_likes.cpp
    gcc -c   -O3 -D__STDC_FORMAT_MACROS   fet.c
    g++ -c   -O3 -D__STDC_FORMAT_MACROS   abcGL.cpp
    g++ -c   -O3 -D__STDC_FORMAT_MACROS   pop1_read.cpp
    g++ -c   -O3 -D__STDC_FORMAT_MACROS   angsd.cpp
    g++ -c   -O3 -D__STDC_FORMAT_MACROS   abcHWE_F.cpp
    gcc -c   -O3 -D__STDC_FORMAT_MACROS   kprobaln.c
    g++ -c   -O3 -D__STDC_FORMAT_MACROS   mpileup.cpp
    argStruct.cpp:3:10: fatal error: version.h: No such file or directory
        3 | #include "version.h"
          |          ^~~~~~~~~~~
    compilation terminated.
    angsd.cpp:11:10: fatal error: version.h: No such file or directory
       11 | #include "version.h"
          |          ^~~~~~~~~~~
 2023-08-20 08:50:53 +01:00
github-actions[bot]
8a62479e06
Merge staging-next into staging 2023-08-20 00:03:24 +00:00
Pol Dellaiera
aea9afbc0f
Merge pull request #249221 from r-ryantm/auto-update/calc 
calc: 2.14.1.6 -> 2.14.3.5
 2023-08-20 00:37:26 +02:00
github-actions[bot]
9145b3fd81
Merge staging-next into staging 2023-08-19 18:01:22 +00:00
OTABI Tomoya
b107015d47
Merge pull request #249755 from natsukium/bamtools/init 
bamtools: init at 2.5.2
 2023-08-19 21:14:25 +09:00
R. Ryantm
85632d125b calc: 2.14.1.6 -> 2.14.3.5 2023-08-19 03:45:31 +00:00
github-actions[bot]
313f7c5380
Merge staging-next into staging 2023-08-19 00:02:13 +00:00
Theodore Ni
ece0953571
Merge branch 'staging-next' into staging 2023-08-18 16:02:27 -07:00
Jack Leightcap
03f6f069b3 gtkwave: 3.3.115 -> 3.3.117 
Signed-off-by: Jack Leightcap <jack@leightcap.com>
 2023-08-18 23:21:16 +02:00
Jack Leightcap
bcedfe83e7 gtkwave: add maintainer jleightcap 
Signed-off-by: Jack Leightcap <jack@leightcap.com>
 2023-08-18 23:21:16 +02:00
Justin Bedo
8d9f56ac2d
last: 1460 -> 1471 
Diff: https://gitlab.com/mcfrith/last/-/compare/refs/tags/1460...1471
 2023-08-18 14:11:53 +10:00
natsukium
5462f67cc8
bamtools: init at 2.5.2 2023-08-18 00:17:15 +09:00
Vincent Laporte
ae68d70536
cvc5: 1.0.5 → 1.0.6 2023-08-16 21:33:07 +02:00
Jan Tojnar
86797b2008 Merge branch 'staging-next' into staging 
Conflicts:
- pkgs/development/libraries/qt-6/default.nix
  Merge a5b92645f1 and 0597d865ef
 2023-08-16 19:37:11 +02:00
Luflosi
dc24d56846
boinc: 7.22.2 -> 7.24.1 
https://github.com/BOINC/boinc/releases/tag/client_release%2F7.24%2F7.24.0
https://github.com/BOINC/boinc/releases/tag/client_release%2F7.24%2F7.24.1
 2023-08-16 18:35:16 +02:00
K900
408482c158
Merge pull request #249330 from evils/kicad 
kicad: 7.0.6 -> 7.0.7
 2023-08-16 15:34:21 +03:00
K900
6edd6f71c7 treewide: clean up all qttranslations workarounds 
There are two kinds of changes here:
- removing explicit qttranslations path hardcoding from applications that were patched to do it
- replacing qttranslations in buildInputs with qttools for packages that really depend on the latter

After this, qttranslation is never used outside Qt itself, as it should.
 2023-08-15 22:11:39 +03:00
R. Ryantm
fa5cfd04d0 openhantek6022: 3.3.2.2 -> 3.3.3 2023-08-15 17:09:05 +00:00
Evils
fb95457e7a kicad: 7.0.6 -> 7.0.7 2023-08-15 11:53:59 +02:00
Pol Dellaiera
3eb7f7a63b
Merge pull request #248683 from oxij/tree/source-root-continues-3 
treewide: cleanup `sourceRoot` and `setSourceRoot` usage
 2023-08-15 05:53:52 +02:00
Artturin
9594f53b99 sage.with-env: remove unnecessary makeWrapper 
Builds without it, all it seems to be doing is adding `/nix/store/6xfmwacsa9a7mzjjarknf9zg28q67ghq-sage-with-env-10.0/var/lib/sage/installed/make_shell_wrapper-hook`
 2023-08-14 23:13:27 +03:00
Lassulus
43fd3a94bb
Merge pull request #245215 from idlip/pspp-bump 
pspp: 1.4.1 -> 1.6.2
 2023-08-14 20:34:03 +02:00
7c6f434c
6221aed0d1
Merge pull request #247359 from xworld21/R-sweave-tex 
R: split tex output for use with texlive.combine
 2023-08-14 16:50:01 +00:00
Pascal Bach
1f546bd2bc
Merge pull request #247575 from lorenz/dsview-1-3-0 
dsview: 1.2.2 -> 1.3.0
 2023-08-14 13:31:47 +02:00
Mauricio Collares
32c7b9a220
Merge pull request #249003 from r-ryantm/auto-update/jmol 
jmol: 16.1.13 -> 16.1.33
 2023-08-14 11:11:21 +02:00
R. Ryantm
8894e03cbb dataexplorer: 3.7.9 -> 3.8.0 2023-08-14 07:01:44 +00:00
Artturi
aab90d8714
Merge pull request #248817 from Artturin/reffixes1 2023-08-14 09:13:40 +03:00
Nick Cao
8500983a14
Merge pull request #248856 from NickCao/eigenmath 
eigenmath: unstable-2023-06-16 -> unstable-2023-08-03
 2023-08-13 22:35:58 -06:00
R. Ryantm
b3e6bcb605 jmol: 16.1.13 -> 16.1.33 2023-08-14 00:00:24 +00:00
Weijia Wang
f6538bb83a eigenmath: set platforms 2023-08-13 17:31:58 +02:00
Weijia Wang
5075896acb
Merge pull request #247626 from r-ryantm/auto-update/fast-downward 
fast-downward: 22.12.0 -> 23.06.0
 2023-08-13 13:49:08 +02:00
Nick Cao
b09606fc0a
eigenmath: unstable-2023-06-16 -> unstable-2023-08-03 
Diff: 800adc5c0b...f202cf0c34
 2023-08-13 15:50:40 +08:00
Artturin
25eef24033 treewide: Don't hardcode nix store in patchelf calls 2023-08-13 05:44:01 +03:00
R. Ryantm
ee363c9ad3 openmvs: 2.1.0 -> 2.2.0 2023-08-13 01:21:41 +00:00
Jan Malakhovski
d098c821d6 treewide: remove unneeded dots and slashes in sourceRoots 2023-08-12 08:29:56 +00:00
Theodore Ni
851d2f6b95
macs2: 2.2.8 -> 2.2.9.1 2023-08-11 14:45:45 -07:00
Jan Malakhovski
591ccfe5b9 treewide: noop: refer to src.name or similar where appropriate, part 3: more use cases 
This continues where d8f7f6a5ce left off. Similarly
to that commit, this commit this also points `sourceRoot`s to `src.name` and similar
instead of keeping hardcoded names, and edits other derivation attrs do do the same,
where appropriate.

Also, similarly to d8f7f6a5ce some of expressions this
edits use `srcs` attribute with customly-named sources, so they have to be moved
into `let` blocks to keep evaluation efficient (the other, worse, way to do this
would to recurcively refer to `elemAt n finalAttrs.srcs` or, similarly, with `rec`).
 2023-08-11 09:20:44 +00:00
Nick Cao
39f729e827
Merge pull request #248258 from r-ryantm/auto-update/cbmc 
cbmc: 5.88.1 -> 5.89.0
 2023-08-10 19:30:18 -06:00
Nick Cao
f6f59fdce7
Merge pull request #248280 from r-ryantm/auto-update/seqkit 
seqkit: 2.5.0 -> 2.5.1
 2023-08-09 23:23:15 -06:00
R. Ryantm
6d530a6389 seqkit: 2.5.0 -> 2.5.1 2023-08-10 04:42:38 +00:00
R. Ryantm
7dbd412737 cbmc: 5.88.1 -> 5.89.0 2023-08-10 02:27:01 +00:00
figsoda
a69648b581 egglog: unstable-2023-07-19 -> unstable-2023-08-09 
Diff: 9fe03ad35a...de31786679
 2023-08-09 16:46:12 -04:00
figsoda
fba2eab4c0 reason-shell: init at 0.3.10 
https://github.com/jaywonchung/reason
 2023-08-08 14:51:53 +00:00
Janik
777fcd15e2
Merge pull request #245677 from fsagbuya/linux-gpib 2023-08-08 14:52:14 +02:00
Vincenzo Mantova
fb4da9bcad R: split tex output for use with texlive.combine 2023-08-08 11:37:56 +01:00
github-actions[bot]
dd48ee46cf
Merge master into staging-next 2023-08-07 12:00:52 +00:00
Weijia Wang
c34272e65c
Merge pull request #247623 from r-ryantm/auto-update/samtools 
samtools: 1.17 -> 1.18
 2023-08-07 13:50:07 +02:00
Vladimír Čunát
a93afc73ef
polymake: pin back to perl 5.36 
https://hydra.nixos.org/build/230316833/nixlog/2/tail
 2023-08-07 08:52:10 +02:00
R. Ryantm
06fadebc20 libpoly: 0.1.11 -> 0.1.13 2023-08-07 04:40:37 +00:00
R. Ryantm
2f9afe24c3 fast-downward: 22.12.0 -> 23.06.0 2023-08-07 01:43:33 +00:00
R. Ryantm
a303664816 samtools: 1.17 -> 1.18 2023-08-07 01:22:06 +00:00
Lorenz Brun
c317e99ee7 dsview: 1.2.2 -> 1.3.0 
The new version is also Qt 6 compatible, so use this opportunity to
switch to Qt 6.
 2023-08-06 22:29:50 +02:00
github-actions[bot]
191e60634e
Merge master into staging-next 2023-08-06 18:01:04 +00:00
Mario Rodas
156a49aa49
Merge pull request #236810 from natsukium/cmtk/update 
cmtk: 3.3.1 -> 3.3.2; fix darwin build
 2023-08-06 11:51:18 -05:00
natsukium
edc5d13ef3
streamlit: manage as python-modules 2023-08-06 22:55:01 +09:00
github-actions[bot]
6458cb74a2
Merge master into staging-next 2023-08-05 12:01:30 +00:00
Mauricio Collares
91c8b652db
Merge pull request #246980 from collares/sage-next-20230728 
[staging-next] sage: numpy/scipy upgrade patches
 2023-08-05 10:14:27 +02:00
Doron Behar
82326d676d
Merge pull request #247122 from doronbehar/pkg/lammps 
lammps: 23Jun2022_update4 -> 2Aug2023
 2023-08-05 08:00:23 +00:00
Nick Cao
bbe9ae26ec
Merge pull request #247159 from panicgh/dataexplorer 
dataexplorer: 3.7.8 -> 3.7.9
 2023-08-05 00:27:43 -06:00
Andrey Alekseenko
2f707365e2 gromacs: update meta 
- license is now lgpl21Plus
- accurate longDescription
 2023-08-05 00:44:04 +00:00
Weijia Wang
70f066f77f
Merge pull request #247155 from wegank/beluga-hash 
beluga: fix hash
 2023-08-04 22:10:47 +02:00
Weijia Wang
5c9ba9e55c
Merge pull request #246863 from r-ryantm/auto-update/picard-tools 
picard-tools: 3.0.0 -> 3.1.0
 2023-08-04 21:17:27 +02:00
Weijia Wang
ac82995363
Merge pull request #247137 from wegank/guile-platforms-3 
treewide: reduce guile_2_0 usage
 2023-08-04 20:36:06 +02:00
Weijia Wang
d4e52e4564 beluga: fix hash 2023-08-04 19:48:22 +02:00
Weijia Wang
c39c0479dd geda: 1.8.2-20130925 -> 1.10.2 2023-08-04 19:10:54 +02:00
Vincent Laporte
14651559b5 hol_light: 2019-10-06 → 2023-07-21 2023-08-04 18:15:31 +02:00
Doron Behar
4939850514 lammps: 23Jun2022_update4 -> 2Aug2023 2023-08-04 17:48:40 +03:00
Nicolas Benes
afd76e93e3 dataexplorer: 3.7.8 -> 3.7.9 2023-08-04 14:19:25 +02:00
markuskowa
394beeefa6
Merge pull request #246983 from sheepforce/molcas-qcmaquis 
openmolcas: enable dmrg and nevpt2 support
 2023-08-04 10:55:44 +02:00
Jan Malakhovski
5852f26bdc treewide: noop: refer to src.name or similar in sourceRoot where appropriate, part 1: trivial cases 2023-08-03 16:32:03 +00:00
Weijia Wang
029622d055
Merge pull request #246876 from wegank/jogl-platforms 
gephi, processing: support more platforms
 2023-08-03 17:47:40 +02:00
Phillip Seeber
eacf49d19e openmolcas: enable dmrg and nevpt2 support 2023-08-03 17:34:32 +02:00
Mauricio Collares
c0f4dc2f59
Merge pull request #246573 from CRTified/sage-overrideScope 
sage: use overrideScope instead of packageOverrides
 2023-08-03 17:02:44 +02:00
Weijia Wang
c9b8162d3d gephi: unrestrict platforms 2023-08-03 15:33:20 +02:00
Florian Agbuya
1d41078177 linux-gpib: init at 4.3.6 2023-08-03 21:19:45 +08:00
R. Ryantm
29a0a9e29a picard-tools: 3.0.0 -> 3.1.0 2023-08-02 22:03:03 +00:00
Weijia Wang
4ae82b0bbe
Merge pull request #246823 from bcdarwin/update-beluga 
beluga: 1.0 -> 1.1
 2023-08-02 23:19:07 +02:00
Weijia Wang
66aedfd010
Merge pull request #246815 from r-ryantm/auto-update/veryfasttree 
veryfasttree: 4.0.1 -> 4.0.2
 2023-08-02 21:56:37 +02:00
Weijia Wang
e4e313aeff
Merge pull request #246485 from r-ryantm/auto-update/bcftools 
bcftools: 1.17 -> 1.18
 2023-08-02 19:51:47 +02:00
Ben Darwin
93a35301f1 beluga: 1.0 -> 1.1 2023-08-02 13:20:41 -04:00
Pol Dellaiera
9a772d7658
veryfasttree: use finalAttrs pattern 2023-08-02 18:51:11 +02:00
R. Ryantm
1fd16883d4 veryfasttree: 4.0.1 -> 4.0.2 2023-08-02 16:13:45 +00:00
Mauricio Collares
c25f522dda sage: import upstream numpy/scipy upgrade patches 2023-08-02 11:41:20 +02:00
Weijia Wang
b5416bf837
Merge pull request #246593 from jiegec/auto-update/cbmc 
cbmc: 5.87.0 -> 5.88.1
 2023-08-01 23:00:00 +02:00
Weijia Wang
23332e13fe
Merge pull request #243407 from natsukium/paml/update 
paml: 4.9j -> 4.10.7
 2023-08-01 22:09:44 +02:00
Jiajie Chen
b96dbd032c cbmc: 5.87.0 -> 5.88.1 2023-08-01 23:52:10 +08:00
Doron Behar
43ce484589
Merge pull request #245375 from doronbehar/pkg/lammps 
lammps: numerous improvements
 2023-08-01 14:44:57 +00:00
markuskowa
b89bbeaac5
Merge pull request #246331 from sheepforce/cp2k 
cp2k: 2023.1 -> 2023.2
 2023-08-01 15:52:32 +02:00
Carl Richard Theodor Schneider
27657a22ba sage: use overrideScope instead of packageOverrides 2023-08-01 15:04:21 +02:00
sheepforce
ab6fef15e0 stellarium: add patch for indi 2.0 compatibility 2023-08-01 11:12:10 +00:00
R. Ryantm
487c6ac2bd bcftools: 1.17 -> 1.18 2023-08-01 03:38:31 +00:00
Weijia Wang
30464bb5c5 treewide: fix mvnHash 2023-07-31 21:13:40 +02:00
Weijia Wang
e658ffa994 treewide: cleanup maven packages 2023-07-31 21:13:09 +02:00
Weijia Wang
8e97536b8c
Merge pull request #246352 from wegank/nvc-bump 
nvc: 1.10.0 -> 1.10.1
 2023-07-31 19:51:20 +02:00
Weijia Wang
819bb53c2c nvc: 1.10.0 -> 1.10.1 2023-07-31 15:31:40 +02:00
Phillip Seeber
0261a4fc37 cp2k: 2023.1 -> 2023.2 2023-07-31 12:33:37 +02:00
Weijia Wang
2d69842838
Merge pull request #245931 from soupglasses/pkg/ns-usbloader-7.0 
ns-usbloader: init at 7.0
 2023-07-31 11:56:30 +02:00
Janik
41ebe3a503
Merge pull request #245958 from whonore/update-dafny-4.2.0 2023-07-29 21:05:23 +02:00
Martin Weinelt
86c62f4d00
Merge pull request #244655 from oddlama/init-insightface 
python310Packages.insightface: init at 0.7.3
 2023-07-29 20:49:19 +02:00
oddlama
3d0ab76d81
mxnet: fix darwin build 2023-07-29 13:28:30 +02:00
Pol Dellaiera
cb8e68fd59
Merge pull request #244146 from GiggleSquid/pkgs/boinc-headless 
boinc: add headless option
 2023-07-29 12:52:12 +02:00
whonore
eb15838bdb dafny: 4.0.0 -> 4.2.0 2023-07-28 17:11:46 -04:00
Sofi
00d7684ad8
maintainers: rename imsofi to soupglasses 2023-07-28 20:01:06 +02:00
Nick Cao
35abc09040
Merge pull request #245458 from vale981/patch-1 
mathematica: enable wayland support
 2023-07-27 20:41:19 -06:00
Doron Behar
eae54103ca lammps: always enable cuda opengl runpath support 2023-07-27 18:51:41 +03:00
Doron Behar
10e7c631c8 lammps: Install vim and neovim files 2023-07-27 18:44:01 +03:00
Doron Behar
6051ebe0ce lammps: Add meta.mainProgram 2023-07-27 18:44:01 +03:00
R. Ryantm
2dd3cda40f elan: 2.0.0 -> 2.0.1 2023-07-27 04:51:49 +00:00
Nick Cao
f00fb876ad
Merge pull request #245556 from figsoda/egglog 
egglog: unstable-2023-07-11 -> unstable-2023-07-19
 2023-07-26 17:50:11 -06:00
Sandro
d0202aa545
Merge pull request #244292 from Luflosi/update/yosys 
yosys: 0.30 -> 0.31
 2023-07-27 00:35:20 +02:00
figsoda
3db4ace604 egglog: unstable-2023-07-11 -> unstable-2023-07-19 
Diff: 14a6fc6060...9fe03ad35a
 2023-07-26 12:09:56 -04:00
Valentin Boettcher
ff73ec1d6d
mathematica: enable wayland support 2023-07-26 10:03:01 -04:00
Pol Dellaiera
6513fb9b37
Merge pull request #244818 from r-ryantm/auto-update/fricas 
fricas: 1.3.8 -> 1.3.9
 2023-07-26 13:26:10 +02:00
Pol Dellaiera
77df81300c
Merge pull request #245256 from r-ryantm/auto-update/labplot 
labplot: 2.10.0 -> 2.10.1
 2023-07-26 13:22:52 +02:00
Justin Bedő
ef4a59fac8
Merge pull request #245302 from r-ryantm/auto-update/last 
last: 1456 -> 1460
 2023-07-26 20:06:44 +10:00
Connor Baker
495875182e
Merge pull request #224068 from SomeoneSerge/respect-config-cudaSupport 
Respect global config.cudaSupport
 2023-07-25 14:18:14 -04:00
luisdomingoaranda
183e7ca1b7 kingstvis: init at 3.6.1 2023-07-25 13:04:12 +02:00
Dilip
401be824b2 pspp: 1.4.1 -> 1.6.2 
Note: needs ssw >= 0.7
 2023-07-25 11:08:27 +05:30
R. Ryantm
40b736f0e8 last: 1456 -> 1460 2023-07-25 04:34:13 +00:00
Nick Cao
c4a065f6c3
Merge pull request #244644 from amiloradovsky/master 
verilator & systemc: update & integration
 2023-07-24 17:01:34 -06:00
R. Ryantm
5577734d9e labplot: 2.10.0 -> 2.10.1 2023-07-24 22:40:48 +00:00
Sandro
a3da17da2f
Merge pull request #237952 from SharzyL/sv-lang 2023-07-24 17:40:15 +02:00
SharzyL
a6b6203b6d
sv-lang: init at 3.0 2023-07-24 12:26:35 +08:00
github-actions[bot]
449a683b10
Merge master into staging-next 2023-07-24 00:02:26 +00:00
Mario Rodas
6936629bae
Merge pull request #245026 from natsukium/dssp/update 
dssp: 4.3.1 -> 4.4.2
 2023-07-23 16:39:43 -05:00
github-actions[bot]
6afe543aec
Merge master into staging-next 2023-07-23 18:01:33 +00:00
Doron Behar
d4f5099ee4
Merge pull request #240730 from doronbehar/pkg/spdlog-fmt 
spdlog: reformat expression arguments, and comment about fmt_9
 2023-07-23 14:42:41 +00:00
natsukium
e54f06de69
dssp: 4.3.1 -> 4.4.2 
Diff: https://github.com/PDB-REDO/dssp/compare/refs/tags/v4.3.1...v4.4.2

Changelog: https://github.com/PDB-REDO/libcifpp/releases/tag/refs/tags/v4.4.2
 2023-07-23 21:24:23 +09:00
github-actions[bot]
86a73bdb86
Merge master into staging-next 2023-07-23 00:02:31 +00:00
R. Ryantm
edb213c399 gromacs: 2023.1 -> 2023.2 2023-07-22 15:07:37 +00:00
Tobias Mayer
ba2ce6e73b
various packages: pin boost179 
Taken from PR #244831 and vcunat amended the miopen override.
 2023-07-22 16:54:22 +02:00
R. Ryantm
e136d9b0c8 fricas: 1.3.8 -> 1.3.9 2023-07-22 11:43:20 +00:00
Felix Bühler
0a2745684e
Merge pull request #239624 from Stunkymonkey/use-optionalString-then 
treewide: use optionalString instead of 'then ""'
 2023-07-22 13:02:47 +02:00
Andrew Miloradovsky
a655cc3d9e verilator: use systemc and other fixes 2023-07-21 11:52:31 +00:00
Andrew Miloradovsky
d0ad644851 systemc: 2.3.3 -> 2.3.4 2023-07-21 11:52:22 +00:00
Someone Serge
471dbe9bcf
treewide: consume config.cudaSupport as required 
Eliminate uses of `config.cudaSupport or false` and alike, since the
option is now declared in config.nix with a default value

fd .nix -t f -x sed 's/config\.cudaSupport or false, cudaPackages [?] [{][}]/config.cudaSupport, cudaPackages ? { }/' '{}' -i
fd .nix -t f -x sed 's/config\.cudaSupport or false/config.cudaSupport/' '{}' -i
fd .nix -t f -x sed 's/cudaSupport = pkgs.config.cudaSupport/inherit (pkgs.config) cudaSupport/' '{}' -i
fd .nix -t f -x sed 's/cudaSupport = config.cudaSupport/inherit (config) cudaSupport/' '{}' -i
 2023-07-20 18:08:19 +03:00
Someone Serge
bf9e6fe9b8
tree-wide: rm cudaSupport ? false formal parameters 
'cudaSupport ? false' -> 'cudaSupport ? config.cudaSupport or false' to respect global defaults

Packages expressions that take `cudaSupport ? false` are likely to
ignore `config.cudaSupport`. Instead, we want them to make `cudaSupport`
a required argument, or to explicitly refer to `config`
 2023-07-20 17:27:07 +03:00
Someone Serge
74549ec63b
tree-wide: 'enableCuda ? false' -> 'config.cudaSupport or false' to respect global defaults 2023-07-20 17:27:07 +03:00
R. Ryantm
baf2e9b036 opensmt: 2.5.1 -> 2.5.2 2023-07-19 04:02:07 +00:00
Jack Connors
3f99b556de boinc: add headless option 
Added headless option and packages entry. Switches config flag --disable-manager and omits X/GUI related libs
 2023-07-18 21:47:12 +01:00
Luflosi
f6cd7355c5
abc-verifier: unstable-2023-02-23 -> unstable-2023-06-28 2023-07-18 21:37:31 +02:00
Mauricio Collares
03843721bf
Merge pull request #244031 from r-ryantm/auto-update/primecount 
primecount: 7.8 -> 7.9
 2023-07-18 14:37:26 +02:00
Weijia Wang
dd3e1f7f7a
Merge pull request #244050 from r-ryantm/auto-update/sumo 
sumo: 1.17.0 -> 1.18.0
 2023-07-18 11:07:09 +03:00
Weijia Wang
61f3c3e183
Merge pull request #244022 from r-ryantm/auto-update/qgroundcontrol 
qgroundcontrol: 4.2.6 -> 4.2.8
 2023-07-18 10:51:46 +03:00
R. Ryantm
85ea4214a3 sumo: 1.17.0 -> 1.18.0 2023-07-17 21:12:36 +00:00
R. Ryantm
48e895c202 primecount: 7.8 -> 7.9 2023-07-17 18:33:41 +00:00
R. Ryantm
99ce6d1bb5 qgroundcontrol: 4.2.6 -> 4.2.8 2023-07-17 18:17:29 +00:00
R. Ryantm
7a9d01d44c seqkit: 2.4.0 -> 2.5.0 2023-07-17 11:15:14 +00:00
Weijia Wang
a65eab9e69 nvc: 1.9.2 -> 1.10.0 2023-07-15 21:52:10 +02:00
github-actions[bot]
2a22bb7087
Merge master into staging-next 2023-07-15 06:01:19 +00:00
figsoda
f6793ae4af egglog: unstable-2023-06-26 -> unstable-2023-07-11 
Diff: 187441ad0d...14a6fc6060
 2023-07-14 11:37:35 -04:00