Commit Graph

5931 Commits

Author SHA1 Message Date
R. Ryantm
142a76c412 kstars: 3.5.7 -> 3.5.8 2022-03-20 17:43:56 +00:00
Gabriel Ebner
3aa72cc471
Merge pull request #157515 from jvanbruegge/isabelle-naproche
isabelle: Enable and use naproche from nixpkgs
2022-03-20 18:26:33 +01:00
Evils
dfb7d36e7a kicad-unstable: 2022-01-13 -> 2022-03-19 2022-03-20 16:32:32 +01:00
Evils
fc6f267e5d kicad: 6.0.2 -> 6.0.4
6.0.3 was tagged but never released due to an issue
2022-03-20 15:36:44 +01:00
Doron Behar
6f227f03cb qalculate-gtk: 4.0.0 -> 4.1.0 2022-03-20 16:04:47 +08:00
Bobby Rong
b3549ba290
Merge pull request #164837 from bobby285271/pantheon-eco
various: remove elementary-icon-theme from buildInputs & vala 0.56 fixes
2022-03-20 13:34:08 +08:00
Martin Weinelt
f4f3622cb1 Merge remote-tracking branch 'origin/staging-next' into staging 2022-03-20 00:00:32 +01:00
Bobby Rong
88aee703c2
various: remove elementary-icon-theme from buildInputs
These apps don't hardcode their icon themes and the icon theme
is no longer picked up by wrapGAppsHook by default. User may
also able to choose to use icon themes of their choice so pulling
them to XDG_DATA_DIRS is mostly no use.
2022-03-19 17:16:30 +08:00
Naïm Favier
9160044f5f
treewide/makeWrapper: replace --run cd with --chdir
Lay the groundwork for switching to binary wrappers by reducing uses
of `--run` (which is not supported by `makeBinaryWrapper`).
2022-03-19 09:46:31 +01:00
7c6f434c
c8677c4da2
Merge pull request #164193 from NixOS/r-updates
R 4.1.2 -> 4.1.3 and rPackages bump
2022-03-18 17:27:53 +00:00
Ryan Mulligan
bfe3a6f08a
Merge pull request #164022 from r-ryantm/auto-update/jmol
jmol: 14.32.30 -> 14.32.33
2022-03-18 10:25:57 -07:00
Sandro
957075fd6d
Merge pull request #164375 from fedeinthemix/gaw-update 2022-03-18 17:58:40 +01:00
Gabriel Ebner
dccd0f76c3
Merge pull request #164717 from collares/lean-3.42.0
lean: 3.41.0 -> 3.42.0
2022-03-18 17:31:26 +01:00
Armeen Mahdian
6cfaf0a464 eggnog-mapper: 1.0.3 -> 2.1.7
https://github.com/eggnogdb/eggnog-mapper/releases
2022-03-18 10:26:47 -05:00
Mauricio Collares
897ba65b6f lean: 3.41.0 -> 3.42.0 2022-03-18 11:52:10 -03:00
github-actions[bot]
588298ee0a
Merge staging-next into staging 2022-03-18 12:01:57 +00:00
R. Ryantm
d055eda636 mavproxy: 1.8.46 -> 1.8.48 2022-03-18 11:17:17 +00:00
R. Ryantm
d29ff668b5 opensmt: 2.3.0 -> 2.3.1 2022-03-17 18:40:58 +00:00
tilcreator
73449ea799 inav-configurator: 3.0.2 -> 4.1.0 2022-03-17 17:50:49 +01:00
Felix Buehler
f8684d34e9 cntk: switch to fetchFromGitHub 2022-03-16 23:23:09 +01:00
github-actions[bot]
177bd4ed53
Merge staging-next into staging 2022-03-16 18:01:43 +00:00
Bobby Rong
2079219a72
Merge pull request #164162 from jdupak/master
QtRVSim: 0.9.1 -> 0.9.2
2022-03-16 21:32:22 +08:00
Federico Beffa
3076eab196 gaw: 20200922 -> 20220315 2022-03-16 08:01:53 +01:00
zowoq
6431086967 Merge remote-tracking branch 'origin/staging-next' into staging
Conflicts:
	pkgs/development/python-modules/symengine/default.nix
2022-03-16 16:03:43 +10:00
Morgan Jones
98a951c509 klee: build with klee-uclibc
This ends up enabling more of the KLEE test suite, so apply patches to
fix those too.
2022-03-15 19:21:00 -06:00
Ryan Mulligan
2a0d98d319
Merge pull request #163638 from r-ryantm/auto-update/siril
siril: 0.99.10.1 -> 1.0.0
2022-03-15 14:56:47 -07:00
Ryan Mulligan
7e1cc45b66
Merge pull request #162443 from r-ryantm/auto-update/phd2
phd2: 2.6.10 -> 2.6.11
2022-03-15 14:56:29 -07:00
Martin Weinelt
8d18f29b60
Merge pull request #161366 from NixOS/staging-next
Staging next 2022-02-22
2022-03-15 22:31:01 +01:00
Ben Siraphob
cc7b9eac78
Merge pull request #164195 from siraben/nuXmv-init 2022-03-15 18:53:13 +00:00
Ben Siraphob
b39792d141
nuXmv: init at 2.0.0 2022-03-15 13:50:58 -05:00
Vladimír Čunát
b61852cd94
Merge branch 'master' into staging-next 2022-03-15 18:08:32 +01:00
Rasmus Thomsen
69895c6248
bada-bib: 0.5.1 -> 0.6.0 2022-03-15 12:50:26 +01:00
Jakub Dupak
b72a99d718 QtRVSim: 0.9.1 -> 0.9.2 2022-03-14 22:04:17 +02:00
Alyssa Ross
d7e181ff83
Merge remote-tracking branch 'nixpkgs/staging-next' into staging
Conflicts:
	pkgs/development/compilers/ocaml/4.12.nix
	pkgs/development/python-modules/oci/default.nix
	pkgs/tools/admin/bubblewrap/default.nix
2022-03-14 12:33:16 +00:00
github-actions[bot]
0ed928e4ab
Merge master into staging-next 2022-03-14 12:01:26 +00:00
Mauricio Collares
5240cbc0d8 sage: adapt tachyon interface for 0.99.3 2022-03-13 16:53:22 -03:00
R. Ryantm
6d61669d69 jmol: 14.32.30 -> 14.32.33 2022-03-13 16:20:57 +00:00
github-actions[bot]
1630ab9b47
Merge master into staging-next 2022-03-13 06:05:11 +00:00
Jakub Dupak
d09489e5f1
QtRvSim: init at 0.9.1 (#163128)
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-03-13 03:08:40 +01:00
github-actions[bot]
6f7d104254
Merge master into staging-next 2022-03-13 00:02:14 +00:00
Sandro
529b89d755
Merge pull request #161434 from collares/lean-3.40.0 2022-03-12 23:43:20 +01:00
Sandro
8057801ad7
Merge pull request #163849 from fedeinthemix/add-xschem-2 2022-03-12 22:32:08 +01:00
R. Ryantm
29d7a27d9f opensmt: 2.2.0 -> 2.3.0 2022-03-12 17:44:51 +00:00
Federico Beffa
5d702c6b23 gaw: init at version 20200922
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-03-12 17:50:10 +01:00
Federico Beffa
a40de4b146 xschem: init at version 3.0.0
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-03-12 17:49:48 +01:00
github-actions[bot]
a9a2d9475d
Merge staging-next into staging 2022-03-11 18:01:59 +00:00
github-actions[bot]
7573d7fe79
Merge master into staging-next 2022-03-11 18:01:20 +00:00
Renaud
28721c55c5
Merge pull request #160342 from Luflosi/update/yosys
yosys: 0.12+54 -> 0.15
2022-03-11 18:15:51 +01:00
Mauricio Collares
bab25a7a3a lean: 3.40.0 -> 3.41.0 2022-03-11 11:40:27 -03:00
R. Ryantm
f764458ed2 siril: 0.99.10.1 -> 1.0.0 2022-03-10 22:40:03 +00:00
Justin Bedo
3739a7819d
R: 4.1.2 -> 4.1.3 2022-03-10 22:31:13 +11:00
github-actions[bot]
f6b4a4048a
Merge staging-next into staging 2022-03-09 12:01:59 +00:00
github-actions[bot]
201cc2f89b
Merge master into staging-next 2022-03-09 00:02:05 +00:00
Luflosi
0e4d199cbd
abc-verifier: 2021.11.12 -> 2022.03.04 2022-03-08 18:28:13 +01:00
R. Ryantm
e0c3da7946 jmol: 14.32.28 -> 14.32.30 2022-03-08 16:34:40 +00:00
github-actions[bot]
69e1d85d54
Merge staging-next into staging 2022-03-06 18:01:46 +00:00
github-actions[bot]
68a45fb1f2
Merge master into staging-next 2022-03-06 18:01:10 +00:00
R. Ryantm
f3288c60f0 marvin: 22.3.0 -> 22.7.0 2022-03-06 07:45:27 +00:00
github-actions[bot]
6933fb31ab
Merge staging-next into staging 2022-03-06 06:01:40 +00:00
github-actions[bot]
3f8e60728f
Merge master into staging-next 2022-03-06 06:01:06 +00:00
Bobby Rong
cf7e4cac05
Merge pull request #161194 from wucke13/mission-planner
mission-planner: 1.3.74 -> 1.3.76
2022-03-06 13:28:50 +08:00
github-actions[bot]
90f82a2f9a
Merge staging-next into staging 2022-03-06 00:02:44 +00:00
github-actions[bot]
9dd2a8b600
Merge master into staging-next 2022-03-06 00:02:10 +00:00
Dmitry Kalinkin
149d68268d
root: fix ROOTConfig.cmake.in patching 2022-03-04 21:04:19 -05:00
github-actions[bot]
a072933f52
Merge staging-next into staging 2022-03-05 00:02:27 +00:00
github-actions[bot]
d4bfb57f40
Merge master into staging-next 2022-03-05 00:01:54 +00:00
7c6f434c
d5058ae9e5
Merge pull request #162688 from r-ryantm/auto-update/jmol
jmol: 14.32.24 -> 14.32.28
2022-03-04 20:43:10 +00:00
github-actions[bot]
d3cf053b7f
Merge staging-next into staging 2022-03-04 18:01:54 +00:00
github-actions[bot]
437813752b
Merge master into staging-next 2022-03-04 18:01:19 +00:00
Bruno Bzeznik
7d62054650 angsd: init at 0.937 2022-03-04 09:17:35 -06:00
Alyssa Ross
c010a19a56
Merge remote-tracking branch 'nixpkgs/staging-next' into staging
Conflicts:
	pkgs/development/python-modules/hypothesmith/default.nix
2022-03-04 14:53:05 +00:00
github-actions[bot]
fc22d0d5e2
Merge master into staging-next 2022-03-04 12:01:33 +00:00
Matthew Wakefield
e85b65f986
minimap2: enable aarch64 builds (#161169)
Co-authored-by: Bobby Rong <rjl931189261@126.com>
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-03-04 12:27:29 +01:00
R. Ryantm
f5258a7d12 jmol: 14.32.24 -> 14.32.28 2022-03-03 23:44:55 +00:00
github-actions[bot]
18a9a18e2b
Merge staging-next into staging 2022-03-02 12:10:55 +00:00
github-actions[bot]
12423e2e92
Merge master into staging-next 2022-03-02 12:05:47 +00:00
R. Ryantm
04ee1b8975 phd2: 2.6.10 -> 2.6.11 2022-03-02 03:13:28 +00:00
Justin Bedo
89eff15f31
last: 1260 -> 1268 2022-03-02 13:35:56 +11:00
Jan van Brügge
c1ef185bdb
isabelle: Use naproche from nixpkgs 2022-03-01 13:43:38 +01:00
Jan van Brügge
2b71e68503
naproche: init at 0.1.0.0 2022-03-01 13:43:37 +01:00
github-actions[bot]
fbd1c5b484
Merge staging-next into staging 2022-03-01 12:11:43 +00:00
github-actions[bot]
4ae3f9a06c
Merge master into staging-next 2022-03-01 12:05:54 +00:00
Gabriel Ebner
8934eb7c91
Merge pull request #157843 from jvanbruegge/isabelle_setup
isabelle: Rebuild isabelle_setup.jar
2022-03-01 12:11:25 +01:00
zowoq
64a89aac86 Merge staging-next into staging
Conflicts:
	pkgs/development/libraries/sqlite/default.nix
2022-03-01 16:20:52 +10:00
R. Ryantm
de0ff65232 cwltool: 3.1.20220221074232 -> 3.1.20220224085855 2022-03-01 03:46:50 +00:00
grnnja
b6c7526d3a
jflap: init at 7.1 2022-02-28 17:12:08 -08:00
github-actions[bot]
bfb0bc0461
Merge master into staging-next 2022-02-28 18:05:41 +00:00
Sandro
b7ec0afb59
Merge pull request #162205 from Stunkymonkey/treewide-vVersion 2022-02-28 14:26:16 +01:00
Felix Buehler
1573dbdcd0 treewide: fix versions starting with 'v' 2022-02-28 13:05:18 +01:00
github-actions[bot]
f831b62376
Merge staging-next into staging 2022-02-28 12:01:47 +00:00
github-actions[bot]
e71c1249e8
Merge master into staging-next 2022-02-28 12:01:10 +00:00
Felix Buehler
fe7678ca81 raxml-mpi: remove appendToName to have a consistent package name for repology 2022-02-28 12:46:15 +01:00
Felix Buehler
13dca33cdc neuron-mpi: remove appendToName to have a consistent package name for repology 2022-02-28 12:46:15 +01:00
Bobby Rong
f35d1b8568
Merge pull request #160332 from florentc/tlaps
tlaps: 1.4.3 -> 1.4.5
2022-02-28 16:33:42 +08:00
Jonathan Ringer
3af9faf36d
Merge pull request #133431 from Ma27/glibc-2.34
glibc: 2.33-108 -> 2.34-115
2022-02-27 18:07:11 -08:00
github-actions[bot]
6787116890
Merge master into staging-next 2022-02-28 00:02:07 +00:00
Guillaume Girol
b9ecdae495
Merge pull request #161344 from ulrikstrid/ulrikstrid/tree-wide-native-inputs
ocamlPackages tree-wide: Move buildInputs that should be nativeBuildInputs
2022-02-27 19:49:07 +00:00
7c6f434c
da576d8a4a
Merge pull request #161876 from FRidh/sage-python
Sage: make it possible to extend the Python runtime environment with additional packages
2022-02-27 19:02:59 +00:00
Maximilian Bosch
52bba1de8a
clingcon: fix build w/glibc-2.34
Failing Hydra build: https://hydra.nixos.org/build/163641612
2022-02-27 10:26:56 +01:00
AndersonTorres
ed2b1b4b90 Merge branch 'master' into staging-next 2022-02-26 21:04:25 -03:00
Vincent Laporte
68e4b639a3
Merge pull request #161111 from ulrikstrid/ulrikstrid/coq-move-dune-to-native
coq: Move dune, ocaml and findlib to nativeBuildInputs
2022-02-26 08:54:53 +01:00
R. Ryantm
21a1125f37 gmsh: 4.9.4 -> 4.9.5 2022-02-25 14:21:11 -08:00
K900
cb2cfba6f7 treewide: switch all desktop file generators to new API
Notably:
- remove explicit arguments that match the defaults
- convert everything to the right Nix types
2022-02-25 13:40:38 -08:00
Frederik Rietdijk
330d9344d2 sage: make it possible not to rebuild sage-tests
Requiring sage-tests as build input just so it gets build is a bit
unfortunatey but understandable. This commit introduces an option to not
add sage-tests as a dependency. This is preferred in case e.g. Python
packages are added to the environment.
2022-02-25 21:27:14 +01:00
Frederik Rietdijk
7442533bf1 sage: support adding extra Python packages to environment
mysage = sage.override { extraPythonPackages = ps: with ps; [ dask ]; };

Note that the sage-tests are executed again as well, which is not very nice.
2022-02-25 21:18:23 +01:00
R. Ryantm
1e7c64aae1 bcftools: 1.14 -> 1.15 2022-02-25 11:12:05 -08:00
markuskowa
49186d631f
Merge pull request #161635 from r-ryantm/auto-update/jmol
jmol: 14.32.21 -> 14.32.24
2022-02-25 13:42:31 +01:00
Ulrik Strid
7e20e9039e coqPackages: tree-wide move packages to nativeBuildInputs and add strictDeps = true
Co-authored-by: Vincent Laporte <vbgl@users.noreply.github.com>
2022-02-25 07:54:17 +01:00
Vincent Laporte
056c34167d why3: 1.4.0 → 1.4.1 2022-02-25 06:00:09 +01:00
Justin Bedő
6b477d556d
Merge pull request #161695 from r-ryantm/auto-update/picard-tools
picard-tools: 2.26.10 -> 2.26.11
2022-02-25 08:27:23 +11:00
R. Ryantm
d6a24fc108 cwltool: 3.1.20220217222804 -> 3.1.20220221074232 2022-02-24 15:52:49 -05:00
R. Ryantm
ce9d28cc49 picard-tools: 2.26.10 -> 2.26.11 2022-02-24 17:34:18 +00:00
Ulrik Strid
48df7cdbba coq: Move dune to nativeBuildInputs and add ocaml, findlib and menhir 2022-02-24 14:39:45 +01:00
Ulrik Strid
a13cdfe520 ocamlPackages tree-wide: Move buildInputs that should be nativeBuildInputs
To keep this for the future we also strictDeps where possible, including for janePackages, topkg, oasis and ocamlbuild.
This makes some closures significantly smaller and makes cross compilation easier
2022-02-24 14:39:27 +01:00
R. Ryantm
1b8518cadd jmol: 14.32.21 -> 14.32.24 2022-02-24 08:42:12 +00:00
github-actions[bot]
cd6011bf17
Merge master into staging-next 2022-02-24 00:02:03 +00:00
Renaud
65ecaa9903
Merge pull request #150078 from r-ryantm/auto-update/gurobi
gurobi: 9.1.2 -> 9.5.0
2022-02-23 22:08:43 +01:00
github-actions[bot]
37f89e2837
Merge master into staging-next 2022-02-23 18:01:10 +00:00
Markus Kowalewski
469ae42107
gromacs: 2021.5 -> 2022 2022-02-23 14:47:26 +01:00
Renaud
a723c88d4e
Merge pull request #159967 from r-ryantm/auto-update/workcraft
workcraft: 3.3.5 -> 3.3.6
2022-02-23 13:30:39 +01:00
github-actions[bot]
10c4b97b44
Merge master into staging-next 2022-02-23 12:01:11 +00:00
Renaud
359d63179e
Merge pull request #160360 from r-ryantm/auto-update/qalculate-gtk
qalculate-gtk: 3.22.0 -> 4.0.0
2022-02-23 08:30:49 +01:00
Mauricio Collares
4ba9b2d198 lean: 3.39.2 -> 3.40.0 2022-02-22 21:02:08 -03:00
github-actions[bot]
ac0e0313b5
Merge staging-next into staging 2022-02-22 06:01:53 +00:00
Bobby Rong
93883402a4
Merge pull request #160594 from Cogitri/bada-bib
bada-bib: 0.4.1 -> 0.5.1
2022-02-22 12:10:40 +08:00
github-actions[bot]
f8210665fc
Merge staging-next into staging 2022-02-22 00:02:51 +00:00
Mauricio Collares
586b897693 sage: update test expectations for stack_data 0.2.0 2022-02-21 14:49:16 -08:00
Wanja Zaeske
2d67cc2bf6 removing maintainer wucke13 from some packages 2022-02-21 22:58:18 +01:00
ajs124
55bf481a21
Merge pull request #159212 from helsinki-systems/init/febio-studio
febio-studio: init at 1.6.1
2022-02-21 17:24:33 +01:00
Scriptkiddi
4e60a4823b febio-studio: init at 1.6.1 2022-02-21 16:43:36 +01:00
Rasmus Thomsen
87c1d9f92c
bada-bib: 0.4.1 -> 0.5.1 2022-02-21 16:33:50 +01:00
Wanja Zaeske
58d5eb70e2 mission-planner: 1.3.74 -> 1.3.76 2022-02-21 09:51:16 +01:00
R. Ryantm
c35aa0a0f3 cwltool: 3.1.20220217190813 -> 3.1.20220217222804 2022-02-21 01:31:33 -05:00
markuskowa
48ab0d0233
Merge pull request #160924 from qbg/submit/mathematica-13.0.1
mathematica: 13.0.0 -> 13.0.1
2022-02-20 10:23:22 +01:00
R. RyanTM
286ecff9e0
getdp: 3.3.0 -> 3.4.0
(#150127)
2022-02-19 22:41:33 +01:00
Mario Rodas
94723d21f9
Merge pull request #159540 from r-ryantm/auto-update/marvin
marvin: 21.20.0 -> 22.3.0
2022-02-19 15:59:08 -05:00
qbg
f4f52d9d70 mathematica: 13.0.0 -> 13.0.1
https://wolfram.com/mathematica/quick-revision-history.html#v130
2022-02-19 11:26:53 -06:00
Millian Poquet
bc2604732e simgrid: mark as broken on darwin 2022-02-19 10:05:17 +01:00
Millian Poquet
3f804f68bc simgrid: 3.28 -> 3.30 + python + clean
- use latest SimGrid release
- enable the python binding (in new output "python")
- reviews from PR 141040 have been applied
2022-02-19 10:05:12 +01:00
Ulrik Strid
4150bf02b5 coq: allow static linking by moving wrapGAppsHook to nativeBuildInputs
Co-authored-by: Vincent Laporte <vbgl@users.noreply.github.com>
2022-02-18 15:17:04 +01:00
Mario Rodas
947c98310c
Merge pull request #160545 from collares/lean-3.39.2
lean: 3.39.1 -> 3.39.2
2022-02-18 06:26:51 -05:00
R. Ryantm
b715fcd9d9 cwltool: 3.1.20220210171524 -> 3.1.20220217190813 2022-02-18 00:36:37 -05:00
Mauricio Collares
0c36a9cc35 lean: 3.39.1 -> 3.39.2 2022-02-17 23:42:05 -03:00
R. RyanTM
94f61e4c82
SPAdes: 3.15.3 -> 3.15.4
(#158938)
2022-02-18 00:55:34 +01:00
R. RyanTM
ac1c96ecec
colmap: 3.6 -> 3.7
* colmap: 3.6 -> 3.7 (#159198)

* colmap: license is BSD-3-Clause

Co-authored-by: Renaud <c0bw3b@users.noreply.github.com>
2022-02-18 00:29:14 +01:00
Ben Wolsieffer
1382f006a9
qgroundcontrol: 4.1.4 -> 4.2.0
* qgroundcontrol: 4.1.4 -> 4.2.0 (#159291)

QGroundControl now tries to download a prebuilt x86_64 .deb package for
the Airmap SDK, so we have to disable this feature. Previously, it was
disabled by default. I guess they were trying to make things easier for
users, but it seems pretty half-baked.

* qgroundcontrol: update homepage

The domain seems to have changed from .org to .com.
2022-02-18 00:09:39 +01:00
Daniel Wheeler
4befe7a89f
snakemake: 6.10.0 -> 6.15.5 (#159026)
Fetch from GitHub rather than PyPI so tests are included.
2022-02-17 18:06:23 -05:00
ajs124
80160499bc
Merge pull request #160340 from helsinki-systems/tetgen
tetgen: also install library and headers
2022-02-17 01:57:18 +01:00
Scriptkiddi
c8fb08b1e4 tetgen: also install library and headers 2022-02-17 01:37:28 +01:00
R. Ryantm
581628a7f4 qalculate-gtk: 3.22.0 -> 4.0.0 2022-02-16 19:33:07 +00:00
Florent C
762faa21a2 tlaps: 1.4.3 -> 1.4.5
This updates tlaps to the most recent stable version and fixes the
template for the url from which the sources are fetched. Previously, the
tarball was fetched from the "current" remote directory from which old
versions are eventually removed. The package was therefore broken.
It also adds myself (florentc) as a maintainer.
2022-02-16 15:19:51 +01:00
Artturi
83dc7a2714
Merge pull request #159808 from r-ryantm/auto-update/tlaplus 2022-02-16 15:53:15 +02:00
Mauricio Collares
b38b641ff3 sageWithDoc: fix Sphinx warnings which break docgen 2022-02-15 22:37:34 -03:00
Ben Siraphob
521cfab34b
Merge pull request #157626 from siraben/formula-init 2022-02-15 18:38:41 -06:00
Sandro
5c5a8df724
Merge pull request #156420 from azuwis/transfig 2022-02-16 00:49:28 +01:00
7c6f434c
16fe911917
Merge pull request #160088 from r-ryantm/auto-update/jmol
jmol: 14.32.6 -> 14.32.21
2022-02-15 21:39:00 +00:00
Kevin Cox
4e883afc5a
Merge pull request #159226 from lorenzleutgeb/gradle
gradle: 7.3.3 -> 7.4
2022-02-15 15:26:18 -05:00
Ben Siraphob
7f94906083
formula: init at 2.0 2022-02-15 14:09:16 -06:00
Lorenz Leutgeb
f7e01145af gradle: Update hashes of dependents for 7.4 2022-02-15 09:17:56 +01:00
Zhong Jianxin
507b23f0d1 chemtool: Set platforms to linux 2022-02-15 10:49:51 +08:00
R. Ryantm
099fefbceb jmol: 14.32.6 -> 14.32.21 2022-02-15 02:42:04 +00:00
Zhong Jianxin
e8f3914985 treewide: Replace transfig with fig2dev
Reasons:

- transfig never get upstream update since it was added to nixpkgs 2006,
  according to [fig2dev Debian changelog][1], upstream maintainership
  was taken over at 2016, and renamed to fig2dev.

- [Debian][2], [ArchLinux][3], [HomeBrew][4] all use fig2dev to replace
  transfig.

- transfig builds [failed][5] on aarch64-darwin, fig2dev builds fine.

- One less package to maintain.

[1]: https://salsa.debian.org/debian/fig2dev/-/blob/debian/1%253.2.6_beta-1/debian/changelog
[2]: https://packages.debian.org/bullseye/transfig
[3]: https://archlinux.org/packages/community/x86_64/fig2dev/
[4]: https://formulae.brew.sh/formula/fig2dev
[5]: https://hydra.nixos.org/build/163404782/nixlog/2
2022-02-15 10:13:56 +08:00
7c6f434c
a6a1e14e52
Merge pull request #159741 from r-ryantm/auto-update/polymake
polymake: 4.5 -> 4.6
2022-02-14 20:52:03 +00:00
7c6f434c
117fdae4b6
Merge pull request #159351 from collares/sage-ipython-8
sage: don't test for Cython source code in tracebacks (temporarily)
2022-02-14 17:18:21 +00:00
Jan van Brügge
75f5b1f5b2
isabelle: Rebuild isabelle_setup.jar
This jar contained a call to /usr/bin/env bash which was causing an
error during the build of the HOL session (which could be ignored) and
caused other errors during the development of https://github.com/NixOS/nixpkgs/pull/157515
 (which could not be ignored). This commit patches the java sources to
 call `bash` directly and rebuild the jar.
2022-02-14 15:17:58 +01:00
Bobby Rong
8617a5a336
Merge pull request #159645 from r-ryantm/auto-update/openhantek6022
openhantek6022: 3.2.4 -> 3.2.5
2022-02-14 19:58:50 +08:00
R. Ryantm
e1f6e33d01 workcraft: 3.3.5 -> 3.3.6 2022-02-14 09:43:01 +00:00
R. Ryantm
240262f564 messer-slim: 3.7 -> 3.7.1 2022-02-14 00:46:29 +00:00
markuskowa
e7a2652f31
Merge pull request #159311 from r-ryantm/auto-update/gmsh
gmsh: 4.9.2 -> 4.9.4
2022-02-13 11:48:17 +01:00
R. Ryantm
42d5cbb78e tlaplus: 1.7.1 -> 1.7.2 2022-02-13 10:33:51 +00:00
R. Ryantm
2220d35562 bada-bib: 0.3.0 -> 0.4.1 2022-02-12 22:22:46 -08:00
R. Ryantm
24b505484b cytoscape: 3.9.0 -> 3.9.1 2022-02-12 21:13:11 -08:00
R. Ryantm
ac4ec1ef75 gretl: 2021d -> 2022a 2022-02-12 21:08:09 -08:00
R. Ryantm
154d72f526 ginac: 1.8.1 -> 1.8.2 2022-02-12 20:56:29 -08:00
R. Ryantm
36800803c5 gama: 2.16 -> 2.17 2022-02-12 20:54:56 -08:00
R. Ryantm
0948b62a1f polymake: 4.5 -> 4.6 2022-02-13 04:50:20 +00:00
R. Ryantm
aa982c28cf kstars: 3.5.6 -> 3.5.7 2022-02-12 20:32:52 -08:00
Justin Bedő
2759d6f8d8
Merge pull request #159675 from r-ryantm/auto-update/picard-tools
picard-tools: 2.26.9 -> 2.26.10
2022-02-13 09:53:20 +11:00
Justin Bedő
7ff9c00c4b
Merge pull request #159562 from r-ryantm/auto-update/mosdepth
mosdepth: 0.3.2 -> 0.3.3
2022-02-13 09:27:54 +11:00
Justin Bedő
28f5937aeb
Merge pull request #159411 from r-ryantm/auto-update/last
last: 1256 -> 1260
2022-02-13 09:25:49 +11:00
R. Ryantm
8a4946df2d picard-tools: 2.26.9 -> 2.26.10 2022-02-12 22:20:29 +00:00
R. Ryantm
80175b54cc openhantek6022: 3.2.4 -> 3.2.5 2022-02-12 20:37:00 +00:00
Robert Scott
83ea8999d4 gmsh: enable tests 2022-02-12 16:15:57 +00:00
Robert Scott
61dc066799 gmsh: enable for darwin 2022-02-12 16:13:53 +00:00
R. Ryantm
8bb7bc766f mosdepth: 0.3.2 -> 0.3.3 2022-02-12 14:31:47 +00:00
Mario Rodas
0ff383436d
Merge pull request #159009 from r-ryantm/auto-update/bcal
bcal: 2.3 -> 2.4
2022-02-12 08:39:47 -05:00
R. Ryantm
983beb2b8b marvin: 21.20.0 -> 22.3.0 2022-02-12 12:52:40 +00:00
7c6f434c
bff729efd3
Merge pull request #158992 from collares/R-stackprotector
R: disable stack protector on aarch64-darwin
2022-02-12 11:32:56 +00:00
Kim Lindberger
c7df3bf58c
Merge pull request #155108 from fedeinthemix/add-xyce-2
Add Xyce 7.4 (second attempt)
2022-02-12 11:34:10 +01:00
Federico Beffa
10b7f30936 xyce,xyce-parallel: init at 7.4
Co-authored-by: Sandro <sandro.jaeckel@gmail.com> and
                Kim Lindberger <kim.lindberger@gmail.com>
2022-02-12 10:26:05 +01:00
R. Ryantm
6ca5bb6e20 last: 1256 -> 1260 2022-02-12 02:52:18 +00:00
Mauricio Collares
c763432549 sage: don't test for Cython source code in tracebacks (temporarily) 2022-02-11 19:13:34 -03:00
R. Ryantm
772c6b674c gmsh: 4.9.2 -> 4.9.4 2022-02-11 18:31:28 +00:00
R. Ryantm
1631ffae8d cwltool: 3.1.20220204090313 -> 3.1.20220210171524 2022-02-11 12:44:06 -05:00
evils
bb8a321187
kicad: 6.0.1 -> 6.0.2 (#159132) 2022-02-11 01:15:42 -05:00
Angus Trau
18592865d7 maintainers: update emilytrau 2022-02-11 04:45:03 +00:00
7c6f434c
06ff90f540
Merge pull request #159020 from collares/arb-2.22.1
arb: 2.21.1 -> 2.22.1
2022-02-10 23:56:18 +00:00
R. RyanTM
b6869047c5
lepton-eda: 1.9.16-20210731 -> 1.9.17-20211219
(#152772)
2022-02-10 21:43:31 +01:00
R. Ryantm
288ba3f85b scilab-bin: 6.0.2 -> 6.1.1 2022-02-10 11:56:08 -08:00
Mauricio Collares
b8c69782a2 sage: adapt tests to arb 2.22 2022-02-10 16:40:41 -03:00