Commit Graph

1148 Commits

Author SHA1 Message Date
Douglas Gillespie
274997b6c4 Merge branch 'main' of https://github.com/PAMGuard/PAMGuard 2024-08-27 12:48:20 +01:00
Douglas Gillespie
b420fd9f9d Major code cleanup
Cleanup of imports, whitespace, etc. across all of PAMGuard. No other changes to code apart from this automatic cleanup.
2024-08-27 12:48:16 +01:00
Jamie Mac
0fb5623e4b
Update readme.md
Added DOI from Zenodo
2024-08-27 12:02:39 +01:00
Douglas Gillespie
5587526399
Update CITATION.cff 2024-08-27 11:50:26 +01:00
Douglas Gillespie
38165a156e
Create CITATION.cff 2024-08-27 11:49:05 +01:00
Douglas Gillespie
b9c613ea1b Final 2.02.13
final readme and version info file for 2.02.13 release.
2024-08-27 09:13:30 +01:00
Douglas Gillespie
a98e07f576 Nearing final release 2.2.13
help for data export
fixes to fx symbol opacity
removal of too much print output
change of error message when plugins loaded (don't say there is an error when a plugin is not compatible with that run mode)
Added option for SourcePanel to have a null return value (not used in any current detectors)
2024-08-26 17:51:10 +01:00
Jamie Mac
38671987db
Bug fixes for deep leanring module (#155)
* Update exporter_help.md

Updated help for exporter

* Update .gitignore

* Bug fixes for deep learning classifier.

Updated the symbol options to make sure opacity is passed through the symbol chooser.
2024-08-26 17:15:43 +01:00
bluetintedfortress
cfd42779a1
Fix if statement for overflow (#121) 2024-08-26 11:15:11 +01:00
Douglas Gillespie
b5b9b94735
Merge from DG (#154)
* Localization output

* update localiser output

* Start effort management system

* Start of Effort plotting

Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

* Logger forms update

Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

* Update LoggerFormGraphics.java

add in correct symbol managemet to forms graphics.

* Effort lines on map

Sort of working OK in real time mode.

* Working effort system

Currently only for map, but seems to work OK

* Update Tethys to latest nilus schema

* Raven importer

Start of a system for a raven importer. Not quite working yet.

* Raven import

Basic functionality working. Not nice to use though.

* Tethys Localization work

Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

* updated Nilus

A few updates around track and target motion measures.

* FX Plot for raven data

Also sorted out symbols a bit and improved symbol selector in Generic plots.

* Update spectrogram mark bearing display

Remove the 90-angle bit

* Raven extra columns

Logging of data from additional Raven table columns
2024-08-23 16:42:39 +01:00
Douglas Gillespie
744e22d84e Merge from Jamie
Difficult merge, with many files becoming corrupted and having to be copied manually from Macster to PAMguard. hopefully all OK now.
2024-08-23 16:38:20 +01:00
Douglas Gillespie
3dfe44d383 Merge branch 'main' of https://github.com/macster110/PAMGuard into macster110-main 2024-08-23 15:23:17 +01:00
Jamie Mac
5cd0012022 Squashed commit of the following:
commit 51aa658514
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Aug 23 14:58:32 2024 +0100

    Tethys updates

    And get rid of some other files that had got into the repo by accident

commit 34ba7ebceb
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Aug 23 09:15:40 2024 +0100

    Merge from DG (#150)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

    * FX Plot for raven data

    Also sorted out symbols a bit and improved symbol selector in Generic plots.

    * Update spectrogram mark bearing display

    Remove the 90-angle bit

    * Raven extra columns

    Logging of data from additional Raven table columns

commit cb1b28423e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Aug 19 15:55:25 2024 +0100

    updates ready for 2.2.12

commit 4829b46b36
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Aug 19 11:54:24 2024 +0100

    Merge from DG (#149)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

    * FX Plot for raven data

    Also sorted out symbols a bit and improved symbol selector in Generic plots.

    * Update spectrogram mark bearing display

    Remove the 90-angle bit

commit 507ff9e28d
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Sat Aug 17 14:34:54 2024 +0100

    Merge from DG (#148)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

    * FX Plot for raven data

    Also sorted out symbols a bit and improved symbol selector in Generic plots.

commit 51757499d4
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Aug 16 10:44:54 2024 +0100

    Merge from DG (#147)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

commit 46bd88c197
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Aug 16 10:40:00 2024 +0100

    Merge Tethys updates from DG (#146)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

commit bea4a544d0
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Thu Aug 8 14:27:05 2024 +0100

    Merge from DG (#145)

    * Localization output

    * update localiser output

commit adf4c87781
Merge: 62121bdb 29293725
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Thu Aug 8 09:29:24 2024 +0100

    Merge branch 'main' into main

commit 2929372533
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Aug 5 17:58:08 2024 +0100

    Tethys Localisation output

    Not all types, but getting there.

commit 62121bdbbd
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Sun Aug 4 11:41:08 2024 +0100

    update jserialcom to 2.11.0

commit 82adc06e3d
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Aug 2 15:26:49 2024 +0100

    Merge DG branch (#144)

    * Refactoring Tethys

    A lot of refactoring of Nilus wrappers with more useful Objects for PAMGUard to work with.

    * Improved document handling

    Abstracted wrapper around nilus documents which allows easyish calling of internal functions in Localize and Detections document without a common base class.

    * Fix doc deletion in detector output panel

commit 36455153a2
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Tue Jul 30 16:34:35 2024 +0100

    Fix doc deletion in detector output panel

commit bc686c0fe6
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Jul 26 16:12:54 2024 +0100

    Improved document handling

    Abstracted wrapper around nilus documents which allows easyish calling of internal functions in Localize and Detections document without a common base class.

commit 4f87b7b661
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 16:07:33 2024 +0100

    Refactoring Tethys

    A lot of refactoring of Nilus wrappers with more useful Objects for PAMGUard to work with.

commit 3abaff0379
Merge: a3f41e22 9eee7434
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 13:50:49 2024 +0100

    Merge pull request #86 from PAMGuard/main

    Merge from main

commit 9eee7434de
Merge: 32c7c9b2 a3f41e22
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 13:50:38 2024 +0100

    Merge branch 'main' into main

commit 32c7c9b263
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 11:55:06 2024 +0100

    Merge from Jamie (#143)

    * Working on the exporter

    * Working out on exporter

    * Working on new symbol options for deep learning and sud file options in SoundAcquisition GUI

    * Add zero pad option for sud files.

    * Updates to sud zero pad options on FX GUI

    * Implementing a data selector for the deep learning module

    * Bug fix to data transforms if the wave data and sample length are different

    * Updated POm to ignore test resources and updates to DL data selector

    * Updates to DL data selector and POM

    * Work on the data selector for the deep learning module.

    * Working on the exporter

    * Working out on exporter

    * Working on new symbol options for deep learning and sud file options in SoundAcquisition GUI

    * Add zero pad option for sud files.

    * Updates to sud zero pad options on FX GUI

    * Implementing a data selector for the deep learning module

    * Updated POm to ignore test resources and updates to DL data selector

    * Bug fix to data transforms if the wave data and sample length are different

    * Updates to DL data selector and POM

    * Work on the data selector for the deep learning module.

    * Data selectors for deep learning models now working with FX

    Still have to be implemented in Swing

    * Update deep_learning_help.md

    Updated help values to have some info on data selectors and symbol managers.

    * Updates to deep learning symbol options for swing and data selector panel for swing

    Made tooltips last longer on TD display  FX

    * Update deep_learning_help.md

    * Swing symbol modifiers for DL and peak freq

    * Squashed commit of the following:

    commit bad2255710
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Thu Jul 18 09:47:47 2024 +0100

        Better symbol options

        Add clearer options button to multi option symbol manager panel.

    * Fix bugs in detection display

    * Bug fix to hiding panes

    * Squashed commit of the following:

    commit 8b5b5b2f18
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Fri Jul 19 17:14:28 2024 +0100

        Updated data selectors for BT display

        Merging old status bar and new DataSelector options so that they work more consistently on the BT display.

    commit bad2255710
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Thu Jul 18 09:47:47 2024 +0100

        Better symbol options

        Add clearer options button to multi option symbol manager panel.

    * Deep learning bug fix

    * Ignore the class path

    * Squashed commit of the following:

    commit 577670ccd0
    Merge: 6510d226 8b5b5b2f
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:35:01 2024 +0100

        Merge branch 'main' of https://github.com/PAMGuard/PAMGuard

    commit 6510d2260e
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:34:58 2024 +0100

        Remove unnecessary text output

    commit 3da8401756
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:29:38 2024 +0100

        updates to Daq

        New DLL, and some LED control, but hasn't fixed stalling problem.

    commit 8b5b5b2f18
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Fri Jul 19 17:14:28 2024 +0100

        Updated data selectors for BT display

        Merging old status bar and new DataSelector options so that they work more consistently on the BT display.

    commit bad2255710
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Thu Jul 18 09:47:47 2024 +0100

        Better symbol options

        Add clearer options button to multi option symbol manager panel.

    * Squashed commit of the following:

    commit 687220dad5
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 11:42:19 2024 +0100

        Change click data selector

        Change Click BT display so it can handle CompoundDataSelectors

    commit 577670ccd0
    Merge: 6510d226 8b5b5b2f
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:35:01 2024 +0100

        Merge branch 'main' of https://github.com/PAMGuard/PAMGuard

    commit 6510d2260e
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:34:58 2024 +0100

        Remove unnecessary text output

    commit 3da8401756
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:29:38 2024 +0100

        updates to Daq

        New DLL, and some LED control, but hasn't fixed stalling problem.

    commit 8b5b5b2f18
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Fri Jul 19 17:14:28 2024 +0100

        Updated data selectors for BT display

        Merging old status bar and new DataSelector options so that they work more consistently on the BT display.

    commit bad2255710
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Thu Jul 18 09:47:47 2024 +0100

        Better symbol options

        Add clearer options button to multi option symbol manager panel.

    ---------

    Co-authored-by: Jamie Mac <macster110@gmail.com>

commit 687220dad5
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 11:42:19 2024 +0100

    Change click data selector

    Change Click BT display so it can handle CompoundDataSelectors

commit 577670ccd0
Merge: 6510d226 8b5b5b2f
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 09:35:01 2024 +0100

    Merge branch 'main' of https://github.com/PAMGuard/PAMGuard

commit 6510d2260e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 09:34:58 2024 +0100

    Remove unnecessary text output

commit 3da8401756
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 09:29:38 2024 +0100

    updates to Daq

    New DLL, and some LED control, but hasn't fixed stalling problem.

commit 8b5b5b2f18
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Jul 19 17:14:28 2024 +0100

    Updated data selectors for BT display

    Merging old status bar and new DataSelector options so that they work more consistently on the BT display.

commit bad2255710
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Thu Jul 18 09:47:47 2024 +0100

    Better symbol options

    Add clearer options button to multi option symbol manager panel.

commit a3f41e22e6
Merge: 0165982a f7be084e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Tue Jul 16 10:58:25 2024 +0100

    Merge pull request #85 from PAMGuard/main

    Fix vector error

commit 0165982a22
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Jul 12 16:57:28 2024 +0100

    Work on localisation export

    Not ready to rock yet.

commit f24dd9bb91
Merge: 07f4398a 3f23474e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Jul 12 16:38:11 2024 +0100

    Merge pull request #84 from PAMGuard/main

    Merge from main

commit 07f4398a1d
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Tue Jun 25 09:25:10 2024 +0100

    Update .classpath

    Fix classpath file

commit 32ab9f7ead
Merge: 3a42eabd 7accb79f
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jun 24 15:43:47 2024 +0100

    Merge pull request #83 from PAMGuard/main

    V2.02.12

commit 3a42eabd74
Merge: 18a507b5 f7b4f44e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jun 24 13:58:16 2024 +0100

    Merge pull request #82 from PAMGuard/main

    Merge from main
2024-08-23 15:07:35 +01:00
Jamie Mac
4f233dd43e Update to the same format as PAMBinaries for exporting to R 2024-08-23 15:04:32 +01:00
Jamie Mac
a05c77b2fd
Update readme.md 2024-08-23 14:58:46 +01:00
Douglas Gillespie
51aa658514 Tethys updates
And get rid of some other files that had got into the repo by accident
2024-08-23 14:58:32 +01:00
Jamie Mac
f4844e8fcd Squashed commit of the following:
commit 34ba7ebceb
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Aug 23 09:15:40 2024 +0100

    Merge from DG (#150)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

    * FX Plot for raven data

    Also sorted out symbols a bit and improved symbol selector in Generic plots.

    * Update spectrogram mark bearing display

    Remove the 90-angle bit

    * Raven extra columns

    Logging of data from additional Raven table columns

commit cb1b28423e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Aug 19 15:55:25 2024 +0100

    updates ready for 2.2.12

commit 4829b46b36
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Aug 19 11:54:24 2024 +0100

    Merge from DG (#149)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

    * FX Plot for raven data

    Also sorted out symbols a bit and improved symbol selector in Generic plots.

    * Update spectrogram mark bearing display

    Remove the 90-angle bit

commit 507ff9e28d
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Sat Aug 17 14:34:54 2024 +0100

    Merge from DG (#148)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

    * FX Plot for raven data

    Also sorted out symbols a bit and improved symbol selector in Generic plots.

commit 51757499d4
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Aug 16 10:44:54 2024 +0100

    Merge from DG (#147)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

commit 46bd88c197
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Aug 16 10:40:00 2024 +0100

    Merge Tethys updates from DG (#146)

    * Localization output

    * update localiser output

    * Start effort management system

    * Start of Effort plotting

    Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

    * Logger forms update

    Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

    * Update LoggerFormGraphics.java

    add in correct symbol managemet to forms graphics.

    * Effort lines on map

    Sort of working OK in real time mode.

    * Working effort system

    Currently only for map, but seems to work OK

    * Update Tethys to latest nilus schema

    * Raven importer

    Start of a system for a raven importer. Not quite working yet.

    * Raven import

    Basic functionality working. Not nice to use though.

    * Tethys Localization work

    Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

    * updated Nilus

    A few updates around track and target motion measures.

commit bea4a544d0
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Thu Aug 8 14:27:05 2024 +0100

    Merge from DG (#145)

    * Localization output

    * update localiser output

commit adf4c87781
Merge: 62121bdb 29293725
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Thu Aug 8 09:29:24 2024 +0100

    Merge branch 'main' into main

commit 2929372533
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Aug 5 17:58:08 2024 +0100

    Tethys Localisation output

    Not all types, but getting there.

commit 62121bdbbd
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Sun Aug 4 11:41:08 2024 +0100

    update jserialcom to 2.11.0

commit 82adc06e3d
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Aug 2 15:26:49 2024 +0100

    Merge DG branch (#144)

    * Refactoring Tethys

    A lot of refactoring of Nilus wrappers with more useful Objects for PAMGUard to work with.

    * Improved document handling

    Abstracted wrapper around nilus documents which allows easyish calling of internal functions in Localize and Detections document without a common base class.

    * Fix doc deletion in detector output panel

commit 36455153a2
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Tue Jul 30 16:34:35 2024 +0100

    Fix doc deletion in detector output panel

commit bc686c0fe6
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Jul 26 16:12:54 2024 +0100

    Improved document handling

    Abstracted wrapper around nilus documents which allows easyish calling of internal functions in Localize and Detections document without a common base class.

commit 4f87b7b661
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 16:07:33 2024 +0100

    Refactoring Tethys

    A lot of refactoring of Nilus wrappers with more useful Objects for PAMGUard to work with.

commit 3abaff0379
Merge: a3f41e22 9eee7434
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 13:50:49 2024 +0100

    Merge pull request #86 from PAMGuard/main

    Merge from main

commit 9eee7434de
Merge: 32c7c9b2 a3f41e22
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 13:50:38 2024 +0100

    Merge branch 'main' into main

commit 32c7c9b263
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 11:55:06 2024 +0100

    Merge from Jamie (#143)

    * Working on the exporter

    * Working out on exporter

    * Working on new symbol options for deep learning and sud file options in SoundAcquisition GUI

    * Add zero pad option for sud files.

    * Updates to sud zero pad options on FX GUI

    * Implementing a data selector for the deep learning module

    * Bug fix to data transforms if the wave data and sample length are different

    * Updated POm to ignore test resources and updates to DL data selector

    * Updates to DL data selector and POM

    * Work on the data selector for the deep learning module.

    * Working on the exporter

    * Working out on exporter

    * Working on new symbol options for deep learning and sud file options in SoundAcquisition GUI

    * Add zero pad option for sud files.

    * Updates to sud zero pad options on FX GUI

    * Implementing a data selector for the deep learning module

    * Updated POm to ignore test resources and updates to DL data selector

    * Bug fix to data transforms if the wave data and sample length are different

    * Updates to DL data selector and POM

    * Work on the data selector for the deep learning module.

    * Data selectors for deep learning models now working with FX

    Still have to be implemented in Swing

    * Update deep_learning_help.md

    Updated help values to have some info on data selectors and symbol managers.

    * Updates to deep learning symbol options for swing and data selector panel for swing

    Made tooltips last longer on TD display  FX

    * Update deep_learning_help.md

    * Swing symbol modifiers for DL and peak freq

    * Squashed commit of the following:

    commit bad2255710
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Thu Jul 18 09:47:47 2024 +0100

        Better symbol options

        Add clearer options button to multi option symbol manager panel.

    * Fix bugs in detection display

    * Bug fix to hiding panes

    * Squashed commit of the following:

    commit 8b5b5b2f18
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Fri Jul 19 17:14:28 2024 +0100

        Updated data selectors for BT display

        Merging old status bar and new DataSelector options so that they work more consistently on the BT display.

    commit bad2255710
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Thu Jul 18 09:47:47 2024 +0100

        Better symbol options

        Add clearer options button to multi option symbol manager panel.

    * Deep learning bug fix

    * Ignore the class path

    * Squashed commit of the following:

    commit 577670ccd0
    Merge: 6510d226 8b5b5b2f
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:35:01 2024 +0100

        Merge branch 'main' of https://github.com/PAMGuard/PAMGuard

    commit 6510d2260e
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:34:58 2024 +0100

        Remove unnecessary text output

    commit 3da8401756
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:29:38 2024 +0100

        updates to Daq

        New DLL, and some LED control, but hasn't fixed stalling problem.

    commit 8b5b5b2f18
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Fri Jul 19 17:14:28 2024 +0100

        Updated data selectors for BT display

        Merging old status bar and new DataSelector options so that they work more consistently on the BT display.

    commit bad2255710
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Thu Jul 18 09:47:47 2024 +0100

        Better symbol options

        Add clearer options button to multi option symbol manager panel.

    * Squashed commit of the following:

    commit 687220dad5
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 11:42:19 2024 +0100

        Change click data selector

        Change Click BT display so it can handle CompoundDataSelectors

    commit 577670ccd0
    Merge: 6510d226 8b5b5b2f
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:35:01 2024 +0100

        Merge branch 'main' of https://github.com/PAMGuard/PAMGuard

    commit 6510d2260e
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:34:58 2024 +0100

        Remove unnecessary text output

    commit 3da8401756
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Mon Jul 22 09:29:38 2024 +0100

        updates to Daq

        New DLL, and some LED control, but hasn't fixed stalling problem.

    commit 8b5b5b2f18
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Fri Jul 19 17:14:28 2024 +0100

        Updated data selectors for BT display

        Merging old status bar and new DataSelector options so that they work more consistently on the BT display.

    commit bad2255710
    Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
    Date:   Thu Jul 18 09:47:47 2024 +0100

        Better symbol options

        Add clearer options button to multi option symbol manager panel.

    ---------

    Co-authored-by: Jamie Mac <macster110@gmail.com>

commit 687220dad5
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 11:42:19 2024 +0100

    Change click data selector

    Change Click BT display so it can handle CompoundDataSelectors

commit 577670ccd0
Merge: 6510d226 8b5b5b2f
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 09:35:01 2024 +0100

    Merge branch 'main' of https://github.com/PAMGuard/PAMGuard

commit 6510d2260e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 09:34:58 2024 +0100

    Remove unnecessary text output

commit 3da8401756
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jul 22 09:29:38 2024 +0100

    updates to Daq

    New DLL, and some LED control, but hasn't fixed stalling problem.

commit 8b5b5b2f18
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Jul 19 17:14:28 2024 +0100

    Updated data selectors for BT display

    Merging old status bar and new DataSelector options so that they work more consistently on the BT display.

commit bad2255710
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Thu Jul 18 09:47:47 2024 +0100

    Better symbol options

    Add clearer options button to multi option symbol manager panel.

commit a3f41e22e6
Merge: 0165982a f7be084e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Tue Jul 16 10:58:25 2024 +0100

    Merge pull request #85 from PAMGuard/main

    Fix vector error

commit 0165982a22
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Jul 12 16:57:28 2024 +0100

    Work on localisation export

    Not ready to rock yet.

commit f24dd9bb91
Merge: 07f4398a 3f23474e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Fri Jul 12 16:38:11 2024 +0100

    Merge pull request #84 from PAMGuard/main

    Merge from main

commit 07f4398a1d
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Tue Jun 25 09:25:10 2024 +0100

    Update .classpath

    Fix classpath file

commit 32ab9f7ead
Merge: 3a42eabd 7accb79f
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jun 24 15:43:47 2024 +0100

    Merge pull request #83 from PAMGuard/main

    V2.02.12

commit 3a42eabd74
Merge: 18a507b5 f7b4f44e
Author: Douglas Gillespie <50671166+douggillespie@users.noreply.github.com>
Date:   Mon Jun 24 13:58:16 2024 +0100

    Merge pull request #82 from PAMGuard/main

    Merge from main
2024-08-23 10:55:40 +01:00
Jamie Mac
6410dd8cf0 Merge branch 'main' of https://github.com/macster110/PAMGuard 2024-08-23 10:52:55 +01:00
Jamie Mac
7205a27b25 Exporter now working 2024-08-23 10:52:53 +01:00
Douglas Gillespie
34ba7ebceb
Merge from DG (#150)
* Localization output

* update localiser output

* Start effort management system

* Start of Effort plotting

Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

* Logger forms update

Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

* Update LoggerFormGraphics.java

add in correct symbol managemet to forms graphics.

* Effort lines on map

Sort of working OK in real time mode.

* Working effort system

Currently only for map, but seems to work OK

* Update Tethys to latest nilus schema

* Raven importer

Start of a system for a raven importer. Not quite working yet.

* Raven import

Basic functionality working. Not nice to use though.

* Tethys Localization work

Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

* updated Nilus

A few updates around track and target motion measures.

* FX Plot for raven data

Also sorted out symbols a bit and improved symbol selector in Generic plots.

* Update spectrogram mark bearing display

Remove the 90-angle bit

* Raven extra columns

Logging of data from additional Raven table columns
2024-08-23 09:15:40 +01:00
Jamie Mac
d4d8457311 Updates to readme 2024-08-23 09:06:34 +01:00
Jamie Mac
2c11ff435b Updates to exporter and data map in FX GUI 2024-08-21 12:53:53 +01:00
Jamie Mac
791dad9439 Merge branch 'main' of https://github.com/macster110/PAMGuard 2024-08-19 16:29:25 +01:00
Jamie Mac
9d4642b6a6 Work on PAMGuard exporter 2024-08-19 16:29:20 +01:00
Douglas Gillespie
cb1b28423e updates ready for 2.2.12 2024-08-19 15:55:25 +01:00
Douglas Gillespie
4829b46b36
Merge from DG (#149)
* Localization output

* update localiser output

* Start effort management system

* Start of Effort plotting

Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

* Logger forms update

Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

* Update LoggerFormGraphics.java

add in correct symbol managemet to forms graphics.

* Effort lines on map

Sort of working OK in real time mode.

* Working effort system

Currently only for map, but seems to work OK

* Update Tethys to latest nilus schema

* Raven importer

Start of a system for a raven importer. Not quite working yet.

* Raven import

Basic functionality working. Not nice to use though.

* Tethys Localization work

Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

* updated Nilus

A few updates around track and target motion measures.

* FX Plot for raven data

Also sorted out symbols a bit and improved symbol selector in Generic plots.

* Update spectrogram mark bearing display

Remove the 90-angle bit
2024-08-19 11:54:24 +01:00
Douglas Gillespie
507ff9e28d
Merge from DG (#148)
* Localization output

* update localiser output

* Start effort management system

* Start of Effort plotting

Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

* Logger forms update

Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

* Update LoggerFormGraphics.java

add in correct symbol managemet to forms graphics.

* Effort lines on map

Sort of working OK in real time mode.

* Working effort system

Currently only for map, but seems to work OK

* Update Tethys to latest nilus schema

* Raven importer

Start of a system for a raven importer. Not quite working yet.

* Raven import

Basic functionality working. Not nice to use though.

* Tethys Localization work

Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

* updated Nilus

A few updates around track and target motion measures.

* FX Plot for raven data

Also sorted out symbols a bit and improved symbol selector in Generic plots.
2024-08-17 14:34:54 +01:00
Jamie Mac
38fde8bc3a Merge branch 'main' of https://github.com/macster110/PAMGuard 2024-08-16 16:58:32 +01:00
Jamie Mac
d4a6531fec Added peak transform pane to deep learning classifier. 2024-08-16 16:58:29 +01:00
Douglas Gillespie
51757499d4
Merge from DG (#147)
* Localization output

* update localiser output

* Start effort management system

* Start of Effort plotting

Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

* Logger forms update

Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

* Update LoggerFormGraphics.java

add in correct symbol managemet to forms graphics.

* Effort lines on map

Sort of working OK in real time mode.

* Working effort system

Currently only for map, but seems to work OK

* Update Tethys to latest nilus schema

* Raven importer

Start of a system for a raven importer. Not quite working yet.

* Raven import

Basic functionality working. Not nice to use though.

* Tethys Localization work

Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

* updated Nilus

A few updates around track and target motion measures.
2024-08-16 10:44:54 +01:00
Douglas Gillespie
46bd88c197
Merge Tethys updates from DG (#146)
* Localization output

* update localiser output

* Start effort management system

* Start of Effort plotting

Strat of effort plotting on map. Framework for using Effort data in other areas (such as Tethys output).

* Logger forms update

Effort and Symbol selectors working with Logger forms. Also functions to add, edit and delete form rows in Viewer mode.

* Update LoggerFormGraphics.java

add in correct symbol managemet to forms graphics.

* Effort lines on map

Sort of working OK in real time mode.

* Working effort system

Currently only for map, but seems to work OK

* Update Tethys to latest nilus schema

* Raven importer

Start of a system for a raven importer. Not quite working yet.

* Raven import

Basic functionality working. Not nice to use though.

* Tethys Localization work

Abstracting out writing of localization objects and document header information so that individual localisers can give fine scale control of this stuff.

* updated Nilus

A few updates around track and target motion measures.
2024-08-16 10:40:00 +01:00
Jamie Mac
984a37235e Updates to the PAMGuardFX launcher 2024-08-12 17:01:36 +01:00
Douglas Gillespie
bea4a544d0
Merge from DG (#145)
* Localization output

* update localiser output
2024-08-08 14:27:05 +01:00
Jamie Mac
f5f448cb88 Updates to deep learning and PAMGuardFX GUI 2024-08-08 14:07:16 +01:00
Douglas Gillespie
adf4c87781
Merge branch 'main' into main 2024-08-08 09:29:24 +01:00
Jamie Mac
fc4c9495cf Getting click deep learning model 2024-08-07 06:11:24 +01:00
Douglas Gillespie
2929372533 Tethys Localisation output
Not all types, but getting there.
2024-08-05 17:58:08 +01:00
Douglas Gillespie
62121bdbbd update jserialcom to 2.11.0 2024-08-04 11:41:08 +01:00
Douglas Gillespie
82adc06e3d
Merge DG branch (#144)
* Refactoring Tethys

A lot of refactoring of Nilus wrappers with more useful Objects for PAMGUard to work with.

* Improved document handling

Abstracted wrapper around nilus documents which allows easyish calling of internal functions in Localize and Detections document without a common base class.

* Fix doc deletion in detector output panel
2024-08-02 15:26:49 +01:00
Jamie Mac
1174e371f0 Detection plot bug fix when showing no scroll bar 2024-07-31 20:58:44 +01:00
Jamie Mac
9fcc6792f9 Updates to data map and fix to detection plots. 2024-07-30 16:46:50 +01:00
Douglas Gillespie
36455153a2 Fix doc deletion in detector output panel 2024-07-30 16:34:35 +01:00
Jamie Mac
7e4ee768d2 Updates to the data map for JavaFX 2024-07-29 16:04:46 +01:00
Jamie Mac
9e65fb18f4 Fix for colour limits on DL prediction pane 2024-07-26 16:40:18 +01:00
Jamie Mac
7be2e4eeed Working on datamap for FX mode 2024-07-26 16:39:41 +01:00
Douglas Gillespie
bc686c0fe6 Improved document handling
Abstracted wrapper around nilus documents which allows easyish calling of internal functions in Localize and Detections document without a common base class.
2024-07-26 16:12:54 +01:00
Jamie Mac
3d7058e671 Updates to deep learning module to handle individual clicks 2024-07-26 09:05:43 +01:00
Jamie Mac
9931e16350 Merge branch 'main' of https://github.com/macster110/PAMGuard 2024-07-24 06:02:02 +01:00
Jamie Mac
f4a8f6c0b9 Merge branch 'main' of https://github.com/macster110/PAMGuard 2024-07-23 17:26:21 +01:00
Jamie Mac
3e59a11925 Bug fixes to DL Symbol Pane 2024-07-23 17:26:12 +01:00