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updated readme
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Douglas Gillespie
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README.html
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README.html
@ -463,11 +463,22 @@ name="_Latest_Version_2.02.08"></a><span lang=EN-US>Latest Version 2.02.08 May
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which mostly occurred when processing large datasets of many offline files, has
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been fixed.</span></p>
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<p class=MsoNormal><span lang=EN-US>Data Map: “Scroll To Data” pop-up menu,
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which didn’t always scroll to the correct place, is now fixed. </span></p>
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<p class=MsoNormal><span lang=EN-US>Bearing Localiser offline: If reprocessing
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bearings, the localizer was not correctly loading required raw or FFT data to
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input to the cross correlation algorithm. This is now fixed so that you can
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reprocess bearings in viewer mode. </span></p>
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<p class=MsoNormal><span lang=EN-US>Map files: Added additional exception
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handlers to handle corrupt map files. </span></p>
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<h2><span lang=EN-US>New Features</span></h2>
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<p class=MsoNormal><span lang=EN-US>Restart Options: When you restart
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processing of offline files, if output data already exist (binary data of
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within database tables) you will be asked if you want to overwrite the data, cancel,
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processing of offline files, if output data already exist (binary data of within
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database tables) you will be asked if you want to overwrite the data, cancel,
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or try to continue from where to left off. </span></p>
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<p class=MsoNormal><span lang=EN-US>Updated SoundTrap sud file interface so
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@ -486,13 +497,12 @@ angle offsets applied to static hydrophones in viewer mode. This is now fixed. <
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<p class=MsoNormal><span lang=EN-US>Click tool bar: Correctly shows event
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selection options even if no species classification options are in place. </span></p>
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<p class=MsoNormal><span lang=EN-US>Fixed Landmarks: Earlier versions were
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‘losing’ these every time PAMGuard started or new data were loaded in viewer
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mode. Now fixed. </span></p>
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<p class=MsoNormal><span lang=EN-US>Fixed Landmarks: Earlier versions were ‘losing’
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these every time PAMGuard started or new data were loaded in viewer mode. Now
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fixed. </span></p>
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<p class=MsoNormal><span lang=EN-US>ROCCA: Fixed (another) memory leak which
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caused PAMGuard to crash when processing large data sets with the ROCCA classifier.
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</span></p>
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<p class=MsoNormal><span lang=EN-US>ROCCA: Fixed (another) memory leak which caused
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PAMGuard to crash when processing large data sets with the ROCCA classifier. </span></p>
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<p class=MsoNormal><span lang=EN-US>Ishmael Modules: Fixed bug which
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occasionally caused crashes when processing many files offline. </span></p>
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@ -551,8 +561,8 @@ low DPI screens. </span></p>
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<p class=MsoNormal><span lang=EN-US>Complete rewrite of the classification
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system to have nested classifiers which can be enabled or disabled. </span></p>
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<p class=MsoNormal><span lang=EN-US>Changes to classification GUI to
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accommodate the new classification system.</span></p>
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<p class=MsoNormal><span lang=EN-US>Changes to classification GUI to accommodate
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the new classification system.</span></p>
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<p class=MsoNormal><span lang=EN-US>Addition of data selectors to the minimum
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number of clicks accepted by the classifier. This allows the click-by-click
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@ -581,8 +591,8 @@ description of the algorithm, screen grabs and examples.</span></p>
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<p class=MsoNormal><span lang=EN-US>Help documentation for Matched Click
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Classifier</span></p>
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<p class=MsoNormal><span lang=EN-US>Database logging of offline tasks (such as
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click re-classification, bearing calculation, etc.)</span></p>
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<p class=MsoNormal><span lang=EN-US>Database logging of offline tasks (such as click
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re-classification, bearing calculation, etc.)</span></p>
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<p class=MsoNormal><span lang=EN-US>Data selector for Whistle Classifier module</span></p>
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@ -657,9 +667,8 @@ the TF FX display to crash if no data were displayed.</span></p>
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<p class=MsoNormal><span lang=EN-US>See major release notes for V 2.02.01
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below. </span></p>
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<p class=MsoNormal><span lang=EN-US>Bug 495: TD FX display throws
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NullPointerException if user has removed all data units and then moves mouse
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over display area.</span></p>
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<p class=MsoNormal><span lang=EN-US>Bug 495: TD FX display throws NullPointerException
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if user has removed all data units and then moves mouse over display area.</span></p>
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<h1><a name="_Latest_Version_2.02.01"></a><span lang=EN-US>Version 2.02.01
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October 2021</span></h1>
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@ -682,11 +691,11 @@ font-family:"Times New Roman",serif'> </span></p>
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<h2>File Format Change</h2>
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<p class=MsoNormal>Changes have been made to the binary file format to support
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the output of additional noise outputs for certain detectors (See below).
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Binary files created with this version will not be compatible with earlier
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versions 2.01.### and below. This version will read and may convert earlier
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format binary files.</p>
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<p class=MsoNormal>Changes have been made to the binary file format to support the
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output of additional noise outputs for certain detectors (See below). Binary
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files created with this version will not be compatible with earlier versions
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2.01.### and below. This version will read and may convert earlier format
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binary files.</p>
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<p class=MsoNormal style='margin-bottom:0cm'><span style='font-size:12.0pt;
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font-family:"Times New Roman",serif'> </span></p>
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@ -816,20 +825,20 @@ decimating/upsampling by a non-integer amount </p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>16. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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Noise Level Outputs - as an aid to performance diagnosis, some detectors
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(currently the GPL, Click Detector and Whistle and Moan Detector) are outputting
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additional noise metrics to their binary output files. These can be read with
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the <a href="https://sourceforge.net/projects/pamguard/files/Matlab/">PAMGuard
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Matlab library</a> and used to diagnose system performance in varying noise
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conditions. Improved displays within PAMGuard for these noise metrics will be
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included in a future release. </p>
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(currently the GPL, Click Detector and Whistle and Moan Detector) are
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outputting additional noise metrics to their binary output files. These can be
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read with the <a href="https://sourceforge.net/projects/pamguard/files/Matlab/">PAMGuard
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Matlab library</a> and used to diagnose system performance in varying noise conditions.
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Improved displays within PAMGuard for these noise metrics will be included in a
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future release. </p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>17. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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An implementation of the Generalized Power Law Detector, developed by Tyler
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Helble ([Helble et al., ‘A generalized power-law detection algorithm for humpback
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whale vocalizations’, The Journal of the Acoustical Society of America, vol.
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131, no. 4, pp. 2682–2699, 2012) is now available. For details, see the
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online help </p>
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Helble ([Helble et al., ‘A generalized power-law detection algorithm for
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humpback whale vocalizations’, The Journal of the Acoustical Society of
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America, vol. 131, no. 4, pp. 2682–2699, 2012) is now available. For
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details, see the online help </p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>18. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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@ -941,9 +950,10 @@ lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> &nb
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lang=EN-US> </span>Better auto-scaling in Ishmael Detector graphics window. </p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>7. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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Change to Windows temporary folder location, to get around Windows Security
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settings that were preventing some modules from working properly. </p>
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US> </span>Change to Windows temporary folder location, to get around
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Windows Security settings that were preventing some modules from working
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properly. </p>
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<!-- ************************************************************************************************************************** --><!-- ************************************************************************************************************************** -->
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@ -1171,8 +1181,8 @@ lang=EN-US> </span>Bug 436. Bug in Serial Port interface was occassionally
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causing PAMGuard to crash without error message.</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>5. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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Bug 437. Right whale detector crashing if no input was set.</p>
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US> </span>Bug 437. Right whale detector crashing if no input was set.</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>6. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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@ -1244,8 +1254,8 @@ classify clicks. </p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>2. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US> </span>Added option in Sound Acquisition settings dialog to
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override filename time stamp and use PC local time instead. </p>
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lang=EN-US> </span>Added option in Sound Acquisition settings dialog to override
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filename time stamp and use PC local time instead. </p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>3. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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@ -1462,10 +1472,10 @@ lang=EN-US> </span>Added adaptive noise filter to Ishmael Detectors.</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>5. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US> </span>Many upgrades to the Sound Playback module, including a
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high-pass filter, gain control, and the ability to mix wavefrom and envelope
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data together to listen to high-frequency clicks and dolphin whistles at the
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same time.</p>
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lang=EN-US> </span>Many upgrades to the Sound Playback module, including a high-pass
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filter, gain control, and the ability to mix wavefrom and envelope data
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together to listen to high-frequency clicks and dolphin whistles at the same
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time.</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>6. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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@ -1621,9 +1631,9 @@ lang=EN-US> </span>Added decimal degrees option to latitude/longitude dialog.</p
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>2. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US> </span>Added option in the Click Delay parameters to restrict the
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number of initial samples used in the calculation. This can be useful for
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cleaning up delays in the presence of echoes and small time delays.</p>
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lang=EN-US> </span>Added option in the Click Delay parameters to restrict the number
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of initial samples used in the calculation. This can be useful for cleaning up
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delays in the presence of echoes and small time delays.</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>3. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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@ -1721,10 +1731,10 @@ lang=EN-US> </span>Better way of coupling scrollers in User Display panels -
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see new options in main menu.</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>2. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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Added Matched Template Click Classifier. Classifies clicks based on an ideal
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template to match and a template to reject. An example of this is to classify
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beaked whale clicks in an environment with dolphin clicks.</p>
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US> </span>Added Matched Template Click Classifier. Classifies clicks
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based on an ideal template to match and a template to reject. An example of
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this is to classify beaked whale clicks in an environment with dolphin clicks.</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>3. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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@ -1736,10 +1746,10 @@ lang=EN-US> </span>Added ability to read differential GPS data.</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>5. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
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lang=EN-US> </span>Added check for duplicate settings in the psf file when
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exiting Pamguard. If duplicate settings are found, user is given the option to
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leave them in the psf or get rid of them. Duplicate settings are ignored by
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Pamguard, but can cause the psf file to grow large over time.</p>
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lang=EN-US> </span>Added check for duplicate settings in the psf file when exiting
|
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Pamguard. If duplicate settings are found, user is given the option to leave
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them in the psf or get rid of them. Duplicate settings are ignored by Pamguard,
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but can cause the psf file to grow large over time.</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>6. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
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@ -1884,8 +1894,8 @@ lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> &nb
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>5. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
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</span>Bug 359. Pamguard crashes when selecting auto-scale option in Noise
|
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Monitor module</p>
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</span>Bug 359. Pamguard crashes when selecting auto-scale option in Noise Monitor
|
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module</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>6. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
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@ -1912,8 +1922,8 @@ Beta versions</p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>11. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
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</span>Bug 366. Rocca manual whistle contour extraction throws error when
|
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trying to classify a boxed whistle</p>
|
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</span>Bug 366. Rocca manual whistle contour extraction throws error when trying
|
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to classify a boxed whistle</p>
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<p class=MsoNormal><b><span lang=EN-US>Upgrades</span></b></p>
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@ -1988,8 +1998,8 @@ invalid parameters. Have added diagnostics to prevent this.</p>
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<p class=MsoNormal><b><span lang=EN-US>Upgrades</span></b></p>
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>1. </span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span>
|
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User is now able to specify Soundtrap date/time format</p>
|
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> </span><span
|
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lang=EN-US> </span>User is now able to specify Soundtrap date/time format</p>
|
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|
||||
<!-- ************************************************************************************************************************** -->
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@ -2035,8 +2045,8 @@ Upgraded jFLAC library to fix.</p>
|
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>7.</span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
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</span>Bug 332. Fixed problem with secondary maps (those not in the main
|
||||
display) not displaying detections.</p>
|
||||
</span>Bug 332. Fixed problem with secondary maps (those not in the main display)
|
||||
not displaying detections.</p>
|
||||
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<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>8.</span><span
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lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
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@ -2161,10 +2171,10 @@ so they will no longer work with older PAMGuard versions.</span></p>
|
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<p class=MsoListParagraph style='margin-left:54.0pt;text-indent:-36.0pt'><span
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lang=EN-US>2.</span><span lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
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</span><span lang=EN-US>Display colour options will be lost and most data displayed
|
||||
on the map may default to black. This is due to the above changes to how
|
||||
colours are managed. Changing back to the colours of your choice is relatively
|
||||
simple through the PAMGuard GUI. </span></p>
|
||||
</span><span lang=EN-US>Display colour options will be lost and most data
|
||||
displayed on the map may default to black. This is due to the above changes to
|
||||
how colours are managed. Changing back to the colours of your choice is
|
||||
relatively simple through the PAMGuard GUI. </span></p>
|
||||
|
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<p class=MsoListParagraph style='margin-left:54.0pt;text-indent:-36.0pt'><span
|
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lang=EN-US> </span></p>
|
||||
@ -2324,8 +2334,8 @@ both 64 bit and 32 bit installations. PAMGuard psf files are now registered in
|
||||
the Windows Registry, so double-clicking on a psf file should run PAMGuard in
|
||||
normal mode (as opposed to Viewer or Mixed modes). Note that the Windows
|
||||
Registry can only hold a single executable reference for psf files; therefore,
|
||||
for users with multiple installations of PAMGuard, double-clicking on a psf
|
||||
will run the most-recently installed version of PAMGuard on the system.</span></p>
|
||||
for users with multiple installations of PAMGuard, double-clicking on a psf will
|
||||
run the most-recently installed version of PAMGuard on the system.</span></p>
|
||||
|
||||
<h1><a name="_Latest_Version_1.15.08"></a><span lang=EN-US>Version 1.15.08
|
||||
November 2016</span></h1>
|
||||
@ -2358,10 +2368,10 @@ high sample rate. </span></p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'>2.<span style='font-size-adjust: none;
|
||||
font-stretch: normal'><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span></span><span lang=EN-US>Bug 305. Date and Time not being correctly
|
||||
extracted from wav files created using SoundTrap recorders. Fixed by correctly
|
||||
finding and unpacking information in the accompanying xml log files that come
|
||||
with SoundTrap files. </span></p>
|
||||
</span></span><span lang=EN-US>Bug 305. Date and Time not being correctly extracted
|
||||
from wav files created using SoundTrap recorders. Fixed by correctly finding
|
||||
and unpacking information in the accompanying xml log files that come with
|
||||
SoundTrap files. </span></p>
|
||||
|
||||
<h1><a name="_Latest_Version_1.15.06"></a><span lang=EN-US>Version 1.15.06
|
||||
November 2016</span></h1>
|
||||
@ -2488,8 +2498,8 @@ detector has been tidied up so that there are a) All Click, b) Tracked Clicks
|
||||
lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span><span lang=EN-US>When tracking online, all the click marking information
|
||||
is written to the same database tables as are used for offline target motion
|
||||
analysis. This means than when reviewing data offline, the tracks created in real
|
||||
time are now available for review and further analysis. </span></p>
|
||||
analysis. This means than when reviewing data offline, the tracks created in
|
||||
real time are now available for review and further analysis. </span></p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>4.</span><span
|
||||
lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -2591,9 +2601,9 @@ changes in future releases. New PAMGuard releases will always be able to open
|
||||
older binary files, however, with previous PAMGuard releases if a newer file
|
||||
format was opened, then PAMGuard was unable to check that the file format was
|
||||
newer and would attempt to read the files and might even corrupt them. Now it
|
||||
will recognise that it cannot open the files, display appropriate error
|
||||
messages and not attempt to read the files. NOTE that at this time there are no
|
||||
planned file format changes and that this is purely a future proofing exercise.</p>
|
||||
will recognise that it cannot open the files, display appropriate error messages
|
||||
and not attempt to read the files. NOTE that at this time there are no planned
|
||||
file format changes and that this is purely a future proofing exercise.</p>
|
||||
|
||||
<p class=MsoListParagraph style='margin-left:38.25pt;text-indent:-20.25pt'>7.<span
|
||||
style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -2719,8 +2729,8 @@ same click multiple times</p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>1.</span><span
|
||||
lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span><span lang=EN-US>Bug 253. Database import fails when Access database
|
||||
contains queries. Fixed.</span></p>
|
||||
</span><span lang=EN-US>Bug 253. Database import fails when Access database contains
|
||||
queries. Fixed.</span></p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>2.</span><span
|
||||
lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -2794,13 +2804,13 @@ for details. </span></p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>3.</span><span
|
||||
lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span><span lang=EN-US>GPS Loading into PAMGuard Viewer. This has been
|
||||
modified so that the rules governing GPS data collection and storage also apply
|
||||
when loading data from the database. For instance, if you've stored all GPS
|
||||
data, you've probably got a record every second in the database which can
|
||||
create memory overflows if you try to load a lot of data in the viewer. You can
|
||||
now tell PAMGuard to only load a data point every n seconds which will reduce
|
||||
the number of points loaded. Useful when making large scale overview maps of a
|
||||
</span><span lang=EN-US>GPS Loading into PAMGuard Viewer. This has been modified
|
||||
so that the rules governing GPS data collection and storage also apply when
|
||||
loading data from the database. For instance, if you've stored all GPS data,
|
||||
you've probably got a record every second in the database which can create
|
||||
memory overflows if you try to load a lot of data in the viewer. You can now
|
||||
tell PAMGuard to only load a data point every n seconds which will reduce the
|
||||
number of points loaded. Useful when making large scale overview maps of a
|
||||
survey. </span></p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span lang=EN-US>4.</span><span
|
||||
@ -2954,9 +2964,9 @@ href="http://dev.mysql.com/downloads/mysql/">http://dev.mysql.com/downloads/mysq
|
||||
|
||||
<p class=MsoListParagraph style='margin-left:47.25pt;text-indent:-29.25pt'><span
|
||||
lang=EN-US>6.</span><span lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span><span lang=EN-US>Changed Rocca Measurement menu item to open a window
|
||||
containing click events, instead of a submenu listing click events. Using
|
||||
a window simplifies multiple event selections</span></p>
|
||||
</span><span lang=EN-US>Changed Rocca Measurement menu item to open a window containing
|
||||
click events, instead of a submenu listing click events. Using a window
|
||||
simplifies multiple event selections</span></p>
|
||||
|
||||
<p class=MsoListParagraph style='margin-left:47.25pt;text-indent:-29.25pt'><span
|
||||
lang=EN-US>7.</span><span lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -3099,8 +3109,9 @@ to read on a time. Fixed</p>
|
||||
|
||||
<p class=MsoNormal><i>Menu Layout</i></p>
|
||||
|
||||
<p class=MsoNormal>The PAMGuard menus have been rearranged into a more intuitive
|
||||
grouping which we believe will help users find functionality more easily. </p>
|
||||
<p class=MsoNormal>The PAMGuard menus have been rearranged into a more
|
||||
intuitive grouping which we believe will help users find functionality more
|
||||
easily. </p>
|
||||
|
||||
<p class=MsoNormal>'Detection' menu has been renamed to 'Settings' since many
|
||||
menu items within this menu were not directly to do with 'Detection'.</p>
|
||||
@ -3172,8 +3183,8 @@ correctly calculated in real world coordinates. </p>
|
||||
<p class=MsoNormal><i>Wild ArcGIS Interface</i> (Maps and Mapping group)</p>
|
||||
|
||||
<p class=MsoNormal>This module, developed by Michael Oswald / SWFSC, allows
|
||||
PAMGuard to output data in a format suitable for display in the WILD ArcGIS marine
|
||||
mammal survey package. See online help for details. </p>
|
||||
PAMGuard to output data in a format suitable for display in the WILD ArcGIS
|
||||
marine mammal survey package. See online help for details. </p>
|
||||
|
||||
<p class=MsoNormal><i>Alarms</i> (Utilities Group)</p>
|
||||
|
||||
@ -3230,9 +3241,9 @@ different. Details are available in the online help. </p>
|
||||
|
||||
<p class=MsoNormal>Can now read raw audio data direct from FLAC files. <a
|
||||
href="http://en.wikipedia.org/wiki/FLAC">FLAC</a> is a lossless compression
|
||||
algorithm for audio data. Files, or folders of files are accessed in the same
|
||||
way as WAV and AIFF files in the Sound Acquisition module. In a future release
|
||||
we also hope to provide support for writing FLAC files from the sound recorder
|
||||
algorithm for audio data. Files, or folders of files are accessed in the same way
|
||||
as WAV and AIFF files in the Sound Acquisition module. In a future release we
|
||||
also hope to provide support for writing FLAC files from the sound recorder
|
||||
module. </p>
|
||||
|
||||
<p class=MsoNormal><i>Sound Recorder Module</i></p>
|
||||
@ -3290,8 +3301,8 @@ whistle.</p>
|
||||
<li class=MsoNormal style='margin-bottom:0cm'>Ishmael Detector configuration.
|
||||
It was impossible to correctly configure these detectors and configuration
|
||||
settings were not being saved correctly. This has now been rectified. </li>
|
||||
<li class=MsoNormal style='margin-bottom:0cm'>Logger forms input of character
|
||||
data. Was causing an exception when character input fields were cleared. </li>
|
||||
<li class=MsoNormal style='margin-bottom:0cm'>Logger forms input of character data.
|
||||
Was causing an exception when character input fields were cleared. </li>
|
||||
<li class=MsoNormal style='margin-bottom:0cm'>Click detector inter click
|
||||
interval display was not working in viewer mode. This has been rectified. </li>
|
||||
<li class=MsoNormal style='margin-bottom:0cm'>Configuration loading. This has
|
||||
@ -3370,8 +3381,8 @@ to these menus to provide additional information to users. </p>
|
||||
the radar display so that bearings can be shown relative to either the vessel
|
||||
or to true North. </p>
|
||||
|
||||
<p class=MsoNormal style='margin-left:36.0pt'>Better control of data in viewer
|
||||
mode, making is easy to scroll through and view data for short time periods. </p>
|
||||
<p class=MsoNormal style='margin-left:36.0pt'>Better control of data in viewer mode,
|
||||
making is easy to scroll through and view data for short time periods. </p>
|
||||
|
||||
<p class=MsoNormal style='margin-left:36.0pt'><i>GPS</i></p>
|
||||
|
||||
@ -3475,9 +3486,9 @@ have implemented database storage for output of these modules. </p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span>Radar Display: A bug which stopped the radar display from correctly displaying
|
||||
bearings to whistles from arrays containing more than two hydrophone elements
|
||||
has been fixed. </p>
|
||||
</span>Radar Display: A bug which stopped the radar display from correctly
|
||||
displaying bearings to whistles from arrays containing more than two hydrophone
|
||||
elements has been fixed. </p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -3589,8 +3600,8 @@ Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span>Bearings can be calculated using the envelope of the waveform rather than
|
||||
the full waveform. The waveform or envelope can also be filtered prior to
|
||||
</span>Bearings can be calculated using the envelope of the waveform rather
|
||||
than the full waveform. The waveform or envelope can also be filtered prior to
|
||||
bearing calculation.</p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
@ -3682,9 +3693,9 @@ the correct data stream. This has been fixed. </p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span>Whistle classifier has some new features in the classifier training
|
||||
panel. It is also now possible to export training data files directly from
|
||||
binary data files. </p>
|
||||
</span>Whistle classifier has some new features in the classifier training panel.
|
||||
It is also now possible to export training data files directly from binary data
|
||||
files. </p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -3746,8 +3757,8 @@ frequency division (i.e. previous versions would convert well from 96kHz to
|
||||
|
||||
<p class=MsoNormal><b>Bug fixes</b></p>
|
||||
|
||||
<p class=MsoNormal>1. Placement of axes on some displays (array manager and depth
|
||||
side panel). Problem in 1.9.01 Beta now fixed. </p>
|
||||
<p class=MsoNormal>1. Placement of axes on some displays (array manager and
|
||||
depth side panel). Problem in 1.9.01 Beta now fixed. </p>
|
||||
|
||||
<p class=MsoNormal>2. Fixed problems of NMEA read out not restarting after a
|
||||
serial drop out. NMEA now restarts correctly. </p>
|
||||
@ -3782,9 +3793,9 @@ become too bit to fit on a screen. </p>
|
||||
PAMGUARD display. </p>
|
||||
|
||||
<p class=MsoNormal>Windows Installer now sets permissions on PAMGUARD folder so
|
||||
that don't need to be an administrator in order to create new files in that
|
||||
directory. Prevents problems especially under Vista/Windows 7 when saving psfs
|
||||
and recording sounds to the default directory. </p>
|
||||
that don't need to be an administrator in order to create new files in that directory.
|
||||
Prevents problems especially under Vista/Windows 7 when saving psfs and
|
||||
recording sounds to the default directory. </p>
|
||||
|
||||
<h2>Version 1.9.00 Beta April 2010</h2>
|
||||
|
||||
@ -3948,13 +3959,13 @@ channels are assigned to a hydrophone. </p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span>Play back of high frequency wav files through National Instruments (NI)
|
||||
cards: When analysing wav files, sound can be output at high frequency
|
||||
(depending on the specification of the NI card). The primary motivation for
|
||||
this has been to develop a test bed for high frequency sound acquisition
|
||||
whereby we can play 500kHz recordings of harbour porpoise out of an NI card on
|
||||
one machine, into NI cards on a different machine which are testing high
|
||||
frequency versions of the click detector.</p>
|
||||
</span>Play back of high frequency wav files through National Instruments (NI) cards:
|
||||
When analysing wav files, sound can be output at high frequency (depending on
|
||||
the specification of the NI card). The primary motivation for this has been to
|
||||
develop a test bed for high frequency sound acquisition whereby we can play
|
||||
500kHz recordings of harbour porpoise out of an NI card on one machine, into NI
|
||||
cards on a different machine which are testing high frequency versions of the
|
||||
click detector.</p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -4022,10 +4033,10 @@ synchronisation.</p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span>Wigner time-frequency plot for the click detector. Clicks are NOT automatically
|
||||
displayed in the Winger window as they are for the waveform and spectrum
|
||||
windows since the Wigner transformation is very time consuming. Clicks will be
|
||||
displayed if you select them with the mouse.</p>
|
||||
</span>Wigner time-frequency plot for the click detector. Clicks are NOT
|
||||
automatically displayed in the Winger window as they are for the waveform and
|
||||
spectrum windows since the Wigner transformation is very time consuming. Clicks
|
||||
will be displayed if you select them with the mouse.</p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -4039,13 +4050,13 @@ Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif
|
||||
features in array dialog for estimations of errors on array location. These
|
||||
feed into to a maximum likelihood estimate of angles from small 2D or 3D sub
|
||||
arrays to give two polar angle coordinates. this can be used to resolve left
|
||||
right ambiguity and is implemented for both the click and the whistle/moan
|
||||
detectors. As a result, the click detector bearing time display can now be set
|
||||
to go from -180 to 180 degrees rather than 0 - 180 degrees. In this case,
|
||||
clicks in the upper half of the bearing display will be to port and clicks in
|
||||
the right half will be to starboard. As you pass a whale which is to port, the
|
||||
clicks will move UP the display. In the long term, I hope to turn this display
|
||||
around so that time is up the screen rather than across. </p>
|
||||
right ambiguity and is implemented for both the click and the whistle/moan detectors.
|
||||
As a result, the click detector bearing time display can now be set to go from
|
||||
-180 to 180 degrees rather than 0 - 180 degrees. In this case, clicks in the
|
||||
upper half of the bearing display will be to port and clicks in the right half
|
||||
will be to starboard. As you pass a whale which is to port, the clicks will
|
||||
move UP the display. In the long term, I hope to turn this display around so
|
||||
that time is up the screen rather than across. </p>
|
||||
|
||||
<p class=MsoNormal><b>Small features and bug fixes</b></p>
|
||||
|
||||
@ -4120,9 +4131,9 @@ Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span>Channel lists in output data streams of Decimator and other modules fixed,
|
||||
so that when channel numbers change, downstream modules configurations get the
|
||||
correct list of available channels. </p>
|
||||
</span>Channel lists in output data streams of Decimator and other modules
|
||||
fixed, so that when channel numbers change, downstream modules configurations
|
||||
get the correct list of available channels. </p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -4701,7 +4712,8 @@ Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif
|
||||
|
||||
<h2>0.5b 31 August 2007 </h2>
|
||||
|
||||
<p class=MsoNormal>Requires Java 6 Update 2 (http://java.com/en/download/manual.jsp)</p>
|
||||
<p class=MsoNormal>Requires Java 6 Update 2
|
||||
(http://java.com/en/download/manual.jsp)</p>
|
||||
|
||||
<p class=MsoNormal>Major new features include:</p>
|
||||
|
||||
@ -4744,8 +4756,8 @@ Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif
|
||||
<p class=MsoNormal> </p>
|
||||
|
||||
<p class=MsoNormal><a name="_Toc312065304"></a><a name="_Toc312063949"></a><span
|
||||
class=Heading2Char><span style='font-size:13.0pt'>1.0Beta 22 Jan 2008 - Pamguard
|
||||
starts two releases, core and beta release</span></span>, </p>
|
||||
class=Heading2Char><span style='font-size:13.0pt'>1.0Beta 22 Jan 2008 -
|
||||
Pamguard starts two releases, core and beta release</span></span>, </p>
|
||||
|
||||
<p class=MsoNormal>this is the beta release</p>
|
||||
|
||||
@ -4763,8 +4775,8 @@ Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
</span>Multi animal click tracking with least squares fit calculation of position
|
||||
on map</p>
|
||||
</span>Multi animal click tracking with least squares fit calculation of
|
||||
position on map</p>
|
||||
|
||||
<p class=MsoListParagraph style='text-indent:-18.0pt'><span style='font-family:
|
||||
Symbol'>'</span><span style='font-size:7.0pt;font-family:"Times New Roman",serif'>
|
||||
@ -4819,10 +4831,10 @@ configurable user displays which support real time scrolling spectrograms and
|
||||
radar displays. Detection and localisation information can be optionally
|
||||
displayed on the map display.Map enhancements include improved scrolling
|
||||
whereby the user can click and drag to pan the area. PamGuard can now interface
|
||||
with MySQL database servers and users can easily select which information is
|
||||
logged. (This replaces the previous 'flat-file' logging feature). A simulation
|
||||
module allows virtual vocalising animals to be placed on the map to assist in
|
||||
training and development. Extensive online user help has been added to PamGuard
|
||||
with MySQL database servers and users can easily select which information is logged.
|
||||
(This replaces the previous 'flat-file' logging feature). A simulation module
|
||||
allows virtual vocalising animals to be placed on the map to assist in training
|
||||
and development. Extensive online user help has been added to PamGuard
|
||||
Application</p>
|
||||
|
||||
<h2>0.03b - first version used in a real 'at sea' environment.18/08/06</h2>
|
||||
|
||||
@ -1,5 +1,6 @@
|
||||
package PamController.settings;
|
||||
|
||||
import java.io.ByteArrayInputStream;
|
||||
import java.io.EOFException;
|
||||
import java.io.File;
|
||||
import java.io.FileInputStream;
|
||||
@ -14,6 +15,7 @@ import PamController.PamController;
|
||||
import PamController.PamSettingManager;
|
||||
import PamController.PamSettings;
|
||||
import PamController.PamSettingsGroup;
|
||||
import PamModel.PamModel;
|
||||
import PamModel.PamModuleInfo;
|
||||
import PamModel.SMRUEnable;
|
||||
import PamView.dialog.PamFileBrowser;
|
||||
@ -226,7 +228,13 @@ public class SettingsImport {
|
||||
ownerClass = Class.forName(aSet.getOwnerClassName());
|
||||
} catch (ClassNotFoundException e) {
|
||||
// TODO Auto-generated catch block
|
||||
e.printStackTrace();
|
||||
// e.printStackTrace();
|
||||
// this is happening since the ownerclassname is not set correctly in psfx files
|
||||
// so we have to deserialise the data to find the class.
|
||||
// ownerClass = getClassFromData(aSet.getSerialisedByteArray());
|
||||
// ownerClass = PamModuleInfo.findModuleClass(aSet.getUnitType());
|
||||
}
|
||||
if (ownerClass == null) {
|
||||
continue;
|
||||
}
|
||||
if (PamControlledUnit.class.isAssignableFrom(ownerClass)) {
|
||||
@ -264,6 +272,17 @@ public class SettingsImport {
|
||||
return groupedSettings;
|
||||
}
|
||||
|
||||
private Class getClassFromData(byte[] data) {
|
||||
try {
|
||||
ObjectInputStream ois = new ObjectInputStream(new ByteArrayInputStream(data));
|
||||
Object obj = ois.readObject();
|
||||
return obj.getClass();
|
||||
} catch (Exception e) {
|
||||
return null;
|
||||
}
|
||||
|
||||
}
|
||||
|
||||
private SettingsImportGroup findGroup(ArrayList<SettingsImportGroup> groupedSettings, String unitName) {
|
||||
for (SettingsImportGroup iG:groupedSettings) {
|
||||
if (iG.getMainSettings().getUnitName().equals(unitName)) {
|
||||
|
||||
@ -283,6 +283,7 @@ public class PamModuleInfo implements PamDependent{
|
||||
}
|
||||
|
||||
|
||||
|
||||
public static JMenu getModulesMenu(Frame parentFrame) {
|
||||
|
||||
ArrayList<ModulesMenuGroup> moduleGroupsList = new ArrayList<ModulesMenuGroup>();
|
||||
|
||||
Loading…
Reference in New Issue
Block a user