Data Map: “Scroll To Data” pop-up menu, +which didn’t always scroll to the correct place, is now fixed.
+ +Bearing Localiser offline: If reprocessing +bearings, the localizer was not correctly loading required raw or FFT data to +input to the cross correlation algorithm. This is now fixed so that you can +reprocess bearings in viewer mode.
+ +Map files: Added additional exception +handlers to handle corrupt map files.
+Restart Options: When you restart -processing of offline files, if output data already exist (binary data of -within database tables) you will be asked if you want to overwrite the data, cancel, +processing of offline files, if output data already exist (binary data of within +database tables) you will be asked if you want to overwrite the data, cancel, or try to continue from where to left off.
Updated SoundTrap sud file interface so
@@ -486,13 +497,12 @@ angle offsets applied to static hydrophones in viewer mode. This is now fixed. <
Click tool bar: Correctly shows event
selection options even if no species classification options are in place. Fixed Landmarks: Earlier versions were
-‘losing’ these every time PAMGuard started or new data were loaded in viewer
-mode. Now fixed. Fixed Landmarks: Earlier versions were ‘losing’
+these every time PAMGuard started or new data were loaded in viewer mode. Now
+fixed. ROCCA: Fixed (another) memory leak which
-caused PAMGuard to crash when processing large data sets with the ROCCA classifier.
- ROCCA: Fixed (another) memory leak which caused
+PAMGuard to crash when processing large data sets with the ROCCA classifier. Ishmael Modules: Fixed bug which
occasionally caused crashes when processing many files offline.
Complete rewrite of the classification system to have nested classifiers which can be enabled or disabled.
-Changes to classification GUI to -accommodate the new classification system.
+Changes to classification GUI to accommodate +the new classification system.
Addition of data selectors to the minimum number of clicks accepted by the classifier. This allows the click-by-click @@ -581,8 +591,8 @@ description of the algorithm, screen grabs and examples.
Help documentation for Matched Click Classifier
-Database logging of offline tasks (such as -click re-classification, bearing calculation, etc.)
+Database logging of offline tasks (such as click +re-classification, bearing calculation, etc.)
Data selector for Whistle Classifier module
@@ -657,9 +667,8 @@ the TF FX display to crash if no data were displayed.See major release notes for V 2.02.01 below.
-Bug 495: TD FX display throws -NullPointerException if user has removed all data units and then moves mouse -over display area.
+Bug 495: TD FX display throws NullPointerException +if user has removed all data units and then moves mouse over display area.
Changes have been made to the binary file format to support -the output of additional noise outputs for certain detectors (See below). -Binary files created with this version will not be compatible with earlier -versions 2.01.### and below. This version will read and may convert earlier -format binary files.
+Changes have been made to the binary file format to support the +output of additional noise outputs for certain detectors (See below). Binary +files created with this version will not be compatible with earlier versions +2.01.### and below. This version will read and may convert earlier format +binary files.
@@ -816,20 +825,20 @@ decimating/upsampling by a non-integer amount
16. Noise Level Outputs - as an aid to performance diagnosis, some detectors -(currently the GPL, Click Detector and Whistle and Moan Detector) are outputting -additional noise metrics to their binary output files. These can be read with -the PAMGuard -Matlab library and used to diagnose system performance in varying noise -conditions. Improved displays within PAMGuard for these noise metrics will be -included in a future release.
+(currently the GPL, Click Detector and Whistle and Moan Detector) are +outputting additional noise metrics to their binary output files. These can be +read with the PAMGuard +Matlab library and used to diagnose system performance in varying noise conditions. +Improved displays within PAMGuard for these noise metrics will be included in a +future release.17. An implementation of the Generalized Power Law Detector, developed by Tyler -Helble ([Helble et al., ‘A generalized power-law detection algorithm for humpback -whale vocalizations’, The Journal of the Acoustical Society of America, vol. -131, no. 4, pp. 2682–2699, 2012) is now available. For details, see the -online help
+Helble ([Helble et al., ‘A generalized power-law detection algorithm for +humpback whale vocalizations’, The Journal of the Acoustical Society of +America, vol. 131, no. 4, pp. 2682–2699, 2012) is now available. For +details, see the online help18. @@ -941,9 +950,10 @@ lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> &nb lang=EN-US> Better auto-scaling in Ishmael Detector graphics window.
7. -Change to Windows temporary folder location, to get around Windows Security -settings that were preventing some modules from working properly.
+lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> Change to Windows temporary folder location, to get around +Windows Security settings that were preventing some modules from working +properly. @@ -1171,8 +1181,8 @@ lang=EN-US> Bug 436. Bug in Serial Port interface was occassionally causing PAMGuard to crash without error message.5. -Bug 437. Right whale detector crashing if no input was set.
+lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> Bug 437. Right whale detector crashing if no input was set.6. @@ -1244,8 +1254,8 @@ classify clicks.
2. Added option in Sound Acquisition settings dialog to -override filename time stamp and use PC local time instead.
+lang=EN-US> Added option in Sound Acquisition settings dialog to override +filename time stamp and use PC local time instead.3. Added adaptive noise filter to Ishmael Detectors.
5. Many upgrades to the Sound Playback module, including a -high-pass filter, gain control, and the ability to mix wavefrom and envelope -data together to listen to high-frequency clicks and dolphin whistles at the -same time.
+lang=EN-US> Many upgrades to the Sound Playback module, including a high-pass +filter, gain control, and the ability to mix wavefrom and envelope data +together to listen to high-frequency clicks and dolphin whistles at the same +time.6. @@ -1621,9 +1631,9 @@ lang=EN-US> Added decimal degrees option to latitude/longitude dialog.
2. Added option in the Click Delay parameters to restrict the -number of initial samples used in the calculation. This can be useful for -cleaning up delays in the presence of echoes and small time delays. +lang=EN-US> Added option in the Click Delay parameters to restrict the number +of initial samples used in the calculation. This can be useful for cleaning up +delays in the presence of echoes and small time delays.3. @@ -1721,10 +1731,10 @@ lang=EN-US> Better way of coupling scrollers in User Display panels - see new options in main menu.
2. -Added Matched Template Click Classifier. Classifies clicks based on an ideal -template to match and a template to reject. An example of this is to classify -beaked whale clicks in an environment with dolphin clicks.
+lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> Added Matched Template Click Classifier. Classifies clicks +based on an ideal template to match and a template to reject. An example of +this is to classify beaked whale clicks in an environment with dolphin clicks.3. @@ -1736,10 +1746,10 @@ lang=EN-US> Added ability to read differential GPS data.
5. Added check for duplicate settings in the psf file when -exiting Pamguard. If duplicate settings are found, user is given the option to -leave them in the psf or get rid of them. Duplicate settings are ignored by -Pamguard, but can cause the psf file to grow large over time.
+lang=EN-US> Added check for duplicate settings in the psf file when exiting +Pamguard. If duplicate settings are found, user is given the option to leave +them in the psf or get rid of them. Duplicate settings are ignored by Pamguard, +but can cause the psf file to grow large over time.6. @@ -1884,8 +1894,8 @@ lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> &nb
5. -Bug 359. Pamguard crashes when selecting auto-scale option in Noise -Monitor module
+Bug 359. Pamguard crashes when selecting auto-scale option in Noise Monitor +module6. @@ -1912,8 +1922,8 @@ Beta versions
11. -Bug 366. Rocca manual whistle contour extraction throws error when -trying to classify a boxed whistle
+Bug 366. Rocca manual whistle contour extraction throws error when trying +to classify a boxed whistleUpgrades
@@ -1988,8 +1998,8 @@ invalid parameters. Have added diagnostics to prevent this.Upgrades
1. -User is now able to specify Soundtrap date/time format
+lang=EN-US style='font-size:7.0pt;font-family:"Times New Roman",serif'> User is now able to specify Soundtrap date/time format @@ -2035,8 +2045,8 @@ Upgraded jFLAC library to fix.7. -Bug 332. Fixed problem with secondary maps (those not in the main -display) not displaying detections.
+Bug 332. Fixed problem with secondary maps (those not in the main display) +not displaying detections.8. @@ -2161,10 +2171,10 @@ so they will no longer work with older PAMGuard versions.
2. -Display colour options will be lost and most data displayed -on the map may default to black. This is due to the above changes to how -colours are managed. Changing back to the colours of your choice is relatively -simple through the PAMGuard GUI.
+Display colour options will be lost and most data +displayed on the map may default to black. This is due to the above changes to +how colours are managed. Changing back to the colours of your choice is +relatively simple through the PAMGuard GUI.@@ -2324,8 +2334,8 @@ both 64 bit and 32 bit installations. PAMGuard psf files are now registered in the Windows Registry, so double-clicking on a psf file should run PAMGuard in normal mode (as opposed to Viewer or Mixed modes). Note that the Windows Registry can only hold a single executable reference for psf files; therefore, -for users with multiple installations of PAMGuard, double-clicking on a psf -will run the most-recently installed version of PAMGuard on the system. +for users with multiple installations of PAMGuard, double-clicking on a psf will +run the most-recently installed version of PAMGuard on the system.
2. -Bug 305. Date and Time not being correctly -extracted from wav files created using SoundTrap recorders. Fixed by correctly -finding and unpacking information in the accompanying xml log files that come -with SoundTrap files.
+Bug 305. Date and Time not being correctly extracted +from wav files created using SoundTrap recorders. Fixed by correctly finding +and unpacking information in the accompanying xml log files that come with +SoundTrap files.4. @@ -2591,9 +2601,9 @@ changes in future releases. New PAMGuard releases will always be able to open older binary files, however, with previous PAMGuard releases if a newer file format was opened, then PAMGuard was unable to check that the file format was newer and would attempt to read the files and might even corrupt them. Now it -will recognise that it cannot open the files, display appropriate error -messages and not attempt to read the files. NOTE that at this time there are no -planned file format changes and that this is purely a future proofing exercise.
+will recognise that it cannot open the files, display appropriate error messages +and not attempt to read the files. NOTE that at this time there are no planned +file format changes and that this is purely a future proofing exercise.7. @@ -2719,8 +2729,8 @@ same click multiple times
1. -Bug 253. Database import fails when Access database -contains queries. Fixed.
+Bug 253. Database import fails when Access database contains +queries. Fixed.2. @@ -2794,13 +2804,13 @@ for details.
3. -GPS Loading into PAMGuard Viewer. This has been -modified so that the rules governing GPS data collection and storage also apply -when loading data from the database. For instance, if you've stored all GPS -data, you've probably got a record every second in the database which can -create memory overflows if you try to load a lot of data in the viewer. You can -now tell PAMGuard to only load a data point every n seconds which will reduce -the number of points loaded. Useful when making large scale overview maps of a +GPS Loading into PAMGuard Viewer. This has been modified +so that the rules governing GPS data collection and storage also apply when +loading data from the database. For instance, if you've stored all GPS data, +you've probably got a record every second in the database which can create +memory overflows if you try to load a lot of data in the viewer. You can now +tell PAMGuard to only load a data point every n seconds which will reduce the +number of points loaded. Useful when making large scale overview maps of a survey.
4.http://dev.mysql.com/downloads/mysq
6.
-Changed Rocca Measurement menu item to open a window
-containing click events, instead of a submenu listing click events. Using
-a window simplifies multiple event selections
7. @@ -3099,8 +3109,9 @@ to read on a time. Fixed
Menu Layout
-The PAMGuard menus have been rearranged into a more intuitive -grouping which we believe will help users find functionality more easily.
+The PAMGuard menus have been rearranged into a more +intuitive grouping which we believe will help users find functionality more +easily.
'Detection' menu has been renamed to 'Settings' since many menu items within this menu were not directly to do with 'Detection'.
@@ -3172,8 +3183,8 @@ correctly calculated in real world coordinates.Wild ArcGIS Interface (Maps and Mapping group)
This module, developed by Michael Oswald / SWFSC, allows -PAMGuard to output data in a format suitable for display in the WILD ArcGIS marine -mammal survey package. See online help for details.
+PAMGuard to output data in a format suitable for display in the WILD ArcGIS +marine mammal survey package. See online help for details.Alarms (Utilities Group)
@@ -3230,9 +3241,9 @@ different. Details are available in the online help.Can now read raw audio data direct from FLAC files. FLAC is a lossless compression -algorithm for audio data. Files, or folders of files are accessed in the same -way as WAV and AIFF files in the Sound Acquisition module. In a future release -we also hope to provide support for writing FLAC files from the sound recorder +algorithm for audio data. Files, or folders of files are accessed in the same way +as WAV and AIFF files in the Sound Acquisition module. In a future release we +also hope to provide support for writing FLAC files from the sound recorder module.
Sound Recorder Module
@@ -3290,8 +3301,8 @@ whistle.Better control of data in viewer -mode, making is easy to scroll through and view data for short time periods.
+Better control of data in viewer mode, +making is easy to scroll through and view data for short time periods.
GPS
@@ -3475,9 +3486,9 @@ have implemented database storage for output of these modules.' -Radar Display: A bug which stopped the radar display from correctly displaying -bearings to whistles from arrays containing more than two hydrophone elements -has been fixed.
+Radar Display: A bug which stopped the radar display from correctly +displaying bearings to whistles from arrays containing more than two hydrophone +elements has been fixed.' @@ -3589,8 +3600,8 @@ Symbol'>'' -Bearings can be calculated using the envelope of the waveform rather than -the full waveform. The waveform or envelope can also be filtered prior to +Bearings can be calculated using the envelope of the waveform rather +than the full waveform. The waveform or envelope can also be filtered prior to bearing calculation.
' -Whistle classifier has some new features in the classifier training -panel. It is also now possible to export training data files directly from -binary data files.
+Whistle classifier has some new features in the classifier training panel. +It is also now possible to export training data files directly from binary data +files.'
@@ -3746,8 +3757,8 @@ frequency division (i.e. previous versions would convert well from 96kHz to
Bug fixes 1. Placement of axes on some displays (array manager and depth
-side panel). Problem in 1.9.01 Beta now fixed. 1. Placement of axes on some displays (array manager and
+depth side panel). Problem in 1.9.01 Beta now fixed. 2. Fixed problems of NMEA read out not restarting after a
serial drop out. NMEA now restarts correctly.
Windows Installer now sets permissions on PAMGUARD folder so -that don't need to be an administrator in order to create new files in that -directory. Prevents problems especially under Vista/Windows 7 when saving psfs -and recording sounds to the default directory.
+that don't need to be an administrator in order to create new files in that directory. +Prevents problems especially under Vista/Windows 7 when saving psfs and +recording sounds to the default directory.' -Play back of high frequency wav files through National Instruments (NI) -cards: When analysing wav files, sound can be output at high frequency -(depending on the specification of the NI card). The primary motivation for -this has been to develop a test bed for high frequency sound acquisition -whereby we can play 500kHz recordings of harbour porpoise out of an NI card on -one machine, into NI cards on a different machine which are testing high -frequency versions of the click detector.
+Play back of high frequency wav files through National Instruments (NI) cards: +When analysing wav files, sound can be output at high frequency (depending on +the specification of the NI card). The primary motivation for this has been to +develop a test bed for high frequency sound acquisition whereby we can play +500kHz recordings of harbour porpoise out of an NI card on one machine, into NI +cards on a different machine which are testing high frequency versions of the +click detector.' @@ -4022,10 +4033,10 @@ synchronisation.
' -Wigner time-frequency plot for the click detector. Clicks are NOT automatically -displayed in the Winger window as they are for the waveform and spectrum -windows since the Wigner transformation is very time consuming. Clicks will be -displayed if you select them with the mouse.
+Wigner time-frequency plot for the click detector. Clicks are NOT +automatically displayed in the Winger window as they are for the waveform and +spectrum windows since the Wigner transformation is very time consuming. Clicks +will be displayed if you select them with the mouse.' @@ -4039,13 +4050,13 @@ Symbol'>''' -Channel lists in output data streams of Decimator and other modules fixed, -so that when channel numbers change, downstream modules configurations get the -correct list of available channels.
+Channel lists in output data streams of Decimator and other modules +fixed, so that when channel numbers change, downstream modules configurations +get the correct list of available channels.' @@ -4701,7 +4712,8 @@ Symbol'>''1.0Beta 22 Jan 2008 - Pamguard -starts two releases, core and beta release,
+class=Heading2Char>1.0Beta 22 Jan 2008 - +Pamguard starts two releases, core and beta release,this is the beta release
@@ -4763,8 +4775,8 @@ Symbol'>'' -Multi animal click tracking with least squares fit calculation of position -on map +Multi animal click tracking with least squares fit calculation of +position on map' @@ -4819,10 +4831,10 @@ configurable user displays which support real time scrolling spectrograms and radar displays. Detection and localisation information can be optionally displayed on the map display.Map enhancements include improved scrolling whereby the user can click and drag to pan the area. PamGuard can now interface -with MySQL database servers and users can easily select which information is -logged. (This replaces the previous 'flat-file' logging feature). A simulation -module allows virtual vocalising animals to be placed on the map to assist in -training and development. Extensive online user help has been added to PamGuard +with MySQL database servers and users can easily select which information is logged. +(This replaces the previous 'flat-file' logging feature). A simulation module +allows virtual vocalising animals to be placed on the map to assist in training +and development. Extensive online user help has been added to PamGuard Application