| .. |
|
angsd
|
|
|
|
ants
|
ants: 2.5.0 -> 2.5.1
|
2024-01-26 01:12:12 +01:00 |
|
aragorn
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
astral
|
astral: make deterministic and clean up
|
2024-03-19 11:24:39 +01:00 |
|
bamtools
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
bayescan
|
|
|
|
bcftools
|
bcftools: 1.18 -> 1.19
|
2023-12-13 06:48:21 +00:00 |
|
bedops
|
|
|
|
bedtools
|
|
|
|
bftools
|
|
|
|
bioawk
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
blast
|
|
|
|
bowtie
|
|
|
|
bowtie2
|
bowtie2: 2.5.2 -> 2.5.3
|
2024-01-18 01:41:31 +00:00 |
|
bppsuite
|
|
|
|
bwa
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
bwa-mem2
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
cd-hit
|
|
|
|
clustal-omega
|
|
|
|
cmtk
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
conglomerate
|
conglomerate: change license to hpndUc
|
2024-03-20 20:49:33 +01:00 |
|
dcm2niix
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
deeptools
|
deeptools: 3.5.4 -> 3.5.5
|
2024-03-09 10:06:54 +00:00 |
|
delly
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
diamond
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
dssp
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
ecopcr
|
|
|
|
eggnog-mapper
|
eggnog-mapper: 2.1.10 -> 2.1.12
|
2024-01-18 19:17:47 +00:00 |
|
emboss
|
|
|
|
est-sfs
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
exonerate
|
|
|
|
EZminc
|
|
|
|
fastp
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
febio-studio
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
flywheel-cli
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
freebayes
|
|
|
|
gatk
|
gatk: 4.4.0.0 -> 4.5.0.0
|
2023-12-15 04:20:42 +00:00 |
|
genmap
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
hh-suite
|
hh-suite: fix build on GCC 13
|
2024-02-08 21:54:47 +00:00 |
|
hisat2
|
|
|
|
hmmer
|
|
|
|
igv
|
igv: 2.17.2 -> 2.17.3
|
2024-03-12 02:48:25 +00:00 |
|
inormalize
|
inormalize: fix build on darwin
|
2024-01-21 23:26:55 +01:00 |
|
iqtree
|
iqtree: 2.2.2.7 -> 2.3.1
|
2024-03-26 08:23:46 +00:00 |
|
itsx
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
iv
|
|
|
|
jbrowse
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
kalign
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
kallisto
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
kent
|
|
|
|
kssd
|
|
|
|
last
|
last: 1541 -> 1542
|
2024-02-19 07:08:37 +00:00 |
|
macs2
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
macse
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
mafft
|
mafft: 7.520 -> 7.525
|
2024-03-13 12:21:27 +00:00 |
|
manta
|
|
|
|
megahit
|
megahit: fir gcc-13 build failure
|
2024-02-10 10:26:43 +00:00 |
|
meme-suite
|
|
|
|
messer-slim
|
messer-slim: 4.1 -> 4.2
|
2024-03-22 17:12:15 +00:00 |
|
migrate
|
|
|
|
minc-tools
|
|
|
|
minc-widgets
|
|
|
|
minia
|
treewide: remove licenses.agpl3
|
2024-03-21 18:09:24 +02:00 |
|
minimap2
|
minimap2: 2.27 -> 2.28
|
2024-04-04 23:45:37 +00:00 |
|
mmseqs2
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
mni_autoreg
|
|
|
|
mrbayes
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
mrtrix
|
|
|
|
muscle
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
N3
|
n3: fix build on darwin
|
2024-01-21 23:22:54 +01:00 |
|
nest
|
|
|
|
neuron
|
|
|
|
niftyreg
|
|
|
|
niftyseg
|
|
|
|
obitools
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
octopus
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
paml
|
|
|
|
picard-tools
|
|
|
|
platypus
|
|
|
|
plink-ng
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
poretools
|
poretools: mark as broken
|
2023-12-11 04:28:39 +00:00 |
|
prodigal
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
quast
|
|
|
|
raxml
|
|
|
|
repseek
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
sambamba
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
samblaster
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
samtools
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
seaview
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
seqkit
|
seqkit: 2.8.0 -> 2.8.1
|
2024-04-07 14:35:21 +00:00 |
|
seqtk
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
snpeff
|
|
|
|
somatic-sniper
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
sortmerna
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
spades
|
SPAdes: fix build
|
2024-01-20 15:28:48 -03:00 |
|
sratoolkit
|
|
|
|
stacks
|
stacks: 2.65 -> 2.66
|
2024-01-24 07:54:36 +00:00 |
|
star
|
|
|
|
strelka
|
strelka: add aarch64-linux support
|
2023-12-11 13:37:17 +01:00 |
|
subread
|
|
|
|
sumatools
|
|
|
|
svaba
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
tandem-aligner
|
|
|
|
tebreak
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
treemix
|
|
|
|
trf
|
|
|
|
trimal
|
|
|
|
trimmomatic
|
treewide: use stripJavaArchivesHook instead of canonicalize-jars-hook
|
2024-03-17 13:35:12 +01:00 |
|
truvari
|
|
|
|
varscan
|
|
|
|
vcftools
|
|
|
|
veryfasttree
|
treewide: add meta.mainProgram to packages with a single binary
|
2024-03-19 03:14:51 +01:00 |
|
whisper
|
whisper: enable parallel building
|
2024-01-25 19:27:12 +00:00 |
|
xenomapper
|
|
|
