nixpkgs/pkgs/applications/science/biology
2022-04-29 09:39:10 -05:00
..
angsd angsd: init at 0.937 2022-03-04 09:17:35 -06:00
ants
aragorn
bayescan treewide: add meta.mainProgram to many packages 2022-04-14 10:24:01 -07:00
bcftools bcftools: 1.14 -> 1.15 2022-02-25 11:12:05 -08:00
bedops
bedtools
bftools
blast blast: 2.12.0 -> 2.13.0 2022-04-29 09:39:10 -05:00
bowtie
bowtie2 bowtie2: 2.4.4 -> 2.4.5 2022-01-23 22:45:59 +00:00
bppsuite
bwa
cd-hit
clustal-omega treewide: add meta.mainProgram to many packages 2022-04-14 10:24:01 -07:00
cmtk cmtk: add -std=c++11 to fix build on gcc11 2022-04-15 11:15:30 -05:00
conglomerate
dcm2niix dcm2niix: support usage of suggested Cloudflare zlib 2022-04-18 15:00:45 -04:00
deeptools deeptools: 3.5.0 -> 3.5.1 2022-01-21 05:36:24 +00:00
delly
diamond diamond: switch to fetchFromGitHub 2021-12-23 19:11:17 +01:00
ecopcr
eggnog-mapper eggnog-mapper: 1.0.3 -> 2.1.7 2022-03-18 10:26:47 -05:00
emboss
est-sfs
exonerate
EZminc
fastp
febio-studio febio-studio: init at 1.6.1 2022-02-21 16:43:36 +01:00
flywheel-cli flywheel-cli: init at 16.2.0 2022-03-28 15:54:39 -04:00
freebayes
genmap
hisat2 hisat2: update homepage 2022-02-06 15:10:53 +01:00
hmmer
igv
inormalize
itsx
iv
kallisto kallisto: 0.46.2 -> 0.48.0 2022-01-31 09:53:54 -08:00
kent
kssd treewide: move autoconf, automake to nativeBuildInputs 2022-03-30 20:17:24 -05:00
last last: 1260 -> 1268 2022-03-02 13:35:56 +11:00
MACS2
macse
manta
megahit
meme-suite
messer-slim messer-slim: 3.7 -> 3.7.1 2022-02-14 00:46:29 +00:00
migrate
minc-tools
minc-widgets
minia
minimap2 minimap2: enable aarch64 builds (#161169) 2022-03-04 12:27:29 +01:00
mni_autoreg
mosdepth mosdepth: 0.3.2 -> 0.3.3 2022-02-12 14:31:47 +00:00
mrbayes
mrtrix
muscle
N3
neuron neuron-mpi: remove appendToName to have a consistent package name for repology 2022-02-28 12:46:15 +01:00
niftyreg
niftyseg niftyseg: switch to fetchFromGitHub 2021-12-23 19:11:17 +01:00
obitools
octopus
paml
picard-tools treewide: add meta.mainProgram to many packages 2022-04-14 10:24:01 -07:00
platypus
plink-ng
poretools python,pythonPackages: make aliases 2022-01-16 18:39:59 +00:00
prodigal
quast
raxml raxml-mpi: remove appendToName to have a consistent package name for repology 2022-02-28 12:46:15 +01:00
repseek repseek: init at 9Sep2014 (#148017) 2022-01-31 14:59:32 +01:00
sambamba sambamba: 0.8.1 -> 0.8.2 (#155972) 2022-01-23 04:51:46 +01:00
samblaster
samtools
seaview seaview: 5.0.4 -> 5.0.5 2021-12-12 15:59:16 +00:00
snpeff
somatic-sniper
sortmerna
spades SPAdes: 3.15.3 -> 3.15.4 2022-02-18 00:55:34 +01:00
stacks stacks: 2.59 -> 2.60 2022-01-02 19:23:58 +01:00
star star: 2.7.9a -> 2.7.10a 2022-01-24 19:51:44 +01:00
strelka
subread subread: init 2.0.3 2021-12-14 13:30:23 +11:00
sumatools
svaba
tebreak tebreak: also use python3 for tests 2022-01-16 18:00:59 +00:00
trimal
truvari
varscan
vcftools
whisper
xenomapper python3Packages.xenomapper: move to top-level 2022-01-01 02:09:11 +01:00