nixpkgs/pkgs/applications/science/biology
2023-03-04 15:44:53 +00:00
..
angsd
ants ants: unpin vtk dependency 2023-01-27 00:21:26 -05:00
aragorn
astral
bayescan treewide: move NIX_CFLAGS_COMPILE to the env attrset 2023-02-22 21:23:04 +02:00
bcftools bcftools: 1.16 -> 1.17 2023-02-25 23:02:27 +00:00
bedops
bedtools
bftools
blast
bowtie treewide:replace http by https when https is a permanent redirection 2023-02-19 21:47:59 +01:00
bowtie2
bppsuite
bwa
cd-hit
clustal-omega
cmtk treewide: move NIX_CFLAGS_COMPILE to the env attrset 2023-02-22 21:23:04 +02:00
conglomerate
dcm2niix treewide: Rename libyamlcpp* to yaml-cpp* 2023-01-31 16:22:54 +01:00
deeptools
delly
diamond diamond: 2.1.3 -> 2.1.4 2023-03-04 15:44:53 +00:00
dssp
ecopcr
eggnog-mapper eggnog-mapper: 2.1.9 -> 2.1.10 2023-02-11 08:43:59 +00:00
emboss
est-sfs
exonerate
EZminc
fastp
febio-studio
flywheel-cli
freebayes treewide: move NIX_CFLAGS_COMPILE to the env attrset 2023-02-22 21:23:04 +02:00
gatk
genmap
hisat2
hmmer
igv igv: 2.15.5 -> 2.16.0 2023-02-04 18:01:58 +00:00
inormalize inormalize/minc-widgets/gimp-plugins: use pname & version 2023-02-12 22:21:44 +01:00
iqtree
itsx
iv
kallisto
kent
kssd
last last: 1445 -> 1447 2023-02-12 17:14:30 +00:00
MACS2
macse
mafft
manta
megahit
meme-suite
messer-slim
migrate
minc-tools
minc-widgets inormalize/minc-widgets/gimp-plugins: use pname & version 2023-02-12 22:21:44 +01:00
minia treewide: move NIX_CFLAGS_COMPILE to the env attrset 2023-02-22 21:23:04 +02:00
minimap2
mmseqs2
mni_autoreg
mosdepth
mrbayes
mrtrix
muscle
N3
nest nest: fix Python & Darwin 2023-02-25 10:28:59 -05:00
neuron neuron-full: 8.2.1 -> 8.2.2 2023-02-26 05:18:37 +00:00
niftyreg treewide: move NIX_CFLAGS_COMPILE to the env attrset 2023-02-22 21:23:04 +02:00
niftyseg
obitools
octopus treewide: move NIX_CFLAGS_COMPILE to the env attrset 2023-02-22 21:23:04 +02:00
paml treewide: move NIX_CFLAGS_COMPILE to the env attrset 2023-02-22 21:23:04 +02:00
picard-tools picard-tools: 2.27.5 -> 3.0.0 2023-03-01 14:43:38 +00:00
platypus
plink-ng treewide: use optionalString 2023-02-13 21:52:34 +01:00
poretools
prodigal
quast treewide: python{ => .pythonForBuild}.interpreter 2023-02-26 20:26:17 +00:00
raxml
repseek
sambamba
samblaster
samtools
seaview treewide:replace http by https when https is a permanent redirection 2023-02-19 21:47:59 +01:00
seqkit
seqtk
snpeff
somatic-sniper
sortmerna
spades
sratoolkit
stacks stacks: 2.60 -> 2.62 2023-02-06 21:36:49 +01:00
star
strelka treewide: move NIX_CFLAGS_COMPILE to the env attrset 2023-02-22 21:23:04 +02:00
subread
sumatools
svaba treewide: move NIX_CFLAGS_COMPILE to the env attrset 2023-02-22 21:23:04 +02:00
tandem-aligner tandem-aligner: fix build with GCC 12 2023-02-25 13:40:11 +01:00
tebreak
treemix
trimal
truvari
varscan varscan: 2.4.4 -> 2.4.5 2023-02-05 13:38:28 +00:00
vcftools
veryfasttree
whisper
xenomapper