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35 lines
1.2 KiB
Nix
35 lines
1.2 KiB
Nix
{stdenv, fetchurl, cpio}:
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# The NCBI package only builds on 32bits - on 64bits it breaks because
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# of position dependent code. Debian packagers have written replacement
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# make files(!). Either we use these, or negotiate a version which can
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# be pushed upstream to NCBI.
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#
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# Another note: you may want the older and deprecated C-libs at ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2008/Mar_17_2008/NCBI_C_Toolkit/ncbi_c--Mar_17_2008.tar.gz
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stdenv.mkDerivation rec {
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name = "ncbi_tools";
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ncbi_version = "Dec_31_2008";
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src = fetchurl {
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url = "ftp://ftp.ncbi.nih.gov/toolbox/ncbi_tools++/2008/${ncbi_version}/ncbi_cxx--${ncbi_version}.tar.gz";
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sha256 = "1b2v0dcdqn3bysgdkj57sxmd6s0hc9wpnxssviz399g6plhxggbr";
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};
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configureFlags = [
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"--without-debug"
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"--with-bin-release"
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"--with-dll"
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"--without-static"
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];
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buildInputs = [ cpio ];
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meta = {
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description = "NCBI Bioinformatics toolbox (incl. BLAST)";
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longDescription = "The NCBI Bioinformatics toolsbox, including command-line utilties, libraries and include files. No X11 support";
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homepage = "http://www.ncbi.nlm.nih.gov/IEB/ToolBox/";
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license = "GPL";
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priority = 5; # zlib.so gives a conflict with zlib
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broken = true;
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};
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}
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