nixpkgs/pkgs/by-name/pr/prodigal/package.nix
aleksana 571c71e6f7 treewide: migrate packages to pkgs/by-name, take 1
We are migrating packages that meet below requirements:

1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration

The tool is here: https://github.com/Aleksanaa/by-name-migrate.
2024-11-09 20:04:51 +08:00

28 lines
678 B
Nix

{ lib, stdenv, fetchFromGitHub }:
stdenv.mkDerivation rec {
pname = "prodigal";
version = "2.6.3";
src = fetchFromGitHub {
repo = "Prodigal";
owner = "hyattpd";
rev = "v${version}";
sha256 = "1fs1hqk83qjbjhrvhw6ni75zakx5ki1ayy3v6wwkn3xvahc9hi5s";
};
makeFlags = [
"CC=${stdenv.cc.targetPrefix}cc"
"INSTALLDIR=$(out)/bin"
];
meta = with lib; {
description = "Fast, reliable protein-coding gene prediction for prokaryotic genomes";
mainProgram = "prodigal";
homepage = "https://github.com/hyattpd/Prodigal";
license = licenses.gpl3;
platforms = platforms.all;
maintainers = with maintainers; [ luispedro ];
};
}