nixpkgs/pkgs/by-name/mi/minimap2/package.nix
aleksana 571c71e6f7 treewide: migrate packages to pkgs/by-name, take 1
We are migrating packages that meet below requirements:

1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration

The tool is here: https://github.com/Aleksanaa/by-name-migrate.
2024-11-09 20:04:51 +08:00

34 lines
835 B
Nix

{ lib, stdenv, fetchFromGitHub, zlib }:
stdenv.mkDerivation rec {
pname = "minimap2";
version = "2.28";
src = fetchFromGitHub {
repo = pname;
owner = "lh3";
rev = "v${version}";
sha256 = "sha256-cBl2BKgPCP/xHZW6fTH51cY9/lV/1HVLsN7a1R1Blv4=";
};
buildInputs = [ zlib ];
makeFlags = lib.optionals stdenv.hostPlatform.isAarch64 [ "arm_neon=1" "aarch64=1" ];
installPhase = ''
mkdir -p $out/bin
cp minimap2 $out/bin
mkdir -p $out/share/man/man1
cp minimap2.1 $out/share/man/man1
'';
meta = with lib; {
description = "Versatile pairwise aligner for genomic and spliced nucleotide sequences";
mainProgram = "minimap2";
homepage = "https://lh3.github.io/minimap2";
license = licenses.mit;
platforms = platforms.all;
maintainers = [ maintainers.arcadio ];
};
}