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571c71e6f7
We are migrating packages that meet below requirements:
1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration
The tool is here: https://github.com/Aleksanaa/by-name-migrate.
42 lines
1.1 KiB
Nix
42 lines
1.1 KiB
Nix
{ lib, stdenv, fetchFromGitHub, zlib, blas, lapack, darwin}:
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stdenv.mkDerivation rec {
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pname = "plink-ng";
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version = "1.90b3";
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src = fetchFromGitHub {
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owner = "chrchang";
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repo = "plink-ng";
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rev = "v${version}";
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sha256 = "1zhffjbwpd50dxywccbnv1rxy9njwz73l4awc5j7i28rgj3davcq";
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};
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buildInputs = [ zlib ] ++ (if stdenv.hostPlatform.isDarwin then [ darwin.apple_sdk.frameworks.Accelerate ] else [ blas lapack ]) ;
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preBuild = ''
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sed -i 's|zlib-1.2.8/zlib.h|zlib.h|g' *.c *.h
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${lib.optionalString stdenv.cc.isClang "sed -i 's|g++|clang++|g' Makefile.std"}
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makeFlagsArray+=(
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ZLIB=-lz
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BLASFLAGS="-lblas -lcblas -llapack"
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);
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'';
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makefile = "Makefile.std";
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installPhase = ''
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mkdir -p $out/bin
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cp plink $out/bin
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'';
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meta = {
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broken = (stdenv.hostPlatform.isLinux && stdenv.hostPlatform.isAarch64);
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description = "Comprehensive update to the PLINK association analysis toolset";
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mainProgram = "plink";
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homepage = "https://www.cog-genomics.org/plink2";
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license = lib.licenses.gpl3;
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platforms = lib.platforms.linux;
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};
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}
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