nixpkgs/pkgs/by-name/ri/ripser/package.nix
aleksana 571c71e6f7 treewide: migrate packages to pkgs/by-name, take 1
We are migrating packages that meet below requirements:

1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration

The tool is here: https://github.com/Aleksanaa/by-name-migrate.
2024-11-09 20:04:51 +08:00

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{ lib, stdenv, fetchFromGitHub
, useCoefficients ? false
, indicateProgress ? false
, useGoogleHashmap ? false, sparsehash ? null
, fileFormat ? "lowerTriangularCsv"
}:
assert lib.assertOneOf "fileFormat" fileFormat
["lowerTriangularCsv" "upperTriangularCsv" "dipha"];
assert useGoogleHashmap -> sparsehash != null;
let
version = "1.2.1";
in
stdenv.mkDerivation {
pname = "ripser";
inherit version;
src = fetchFromGitHub {
owner = "Ripser";
repo = "ripser";
rev = "v${version}";
sha256 = "sha256-BxmkPQ/nl5cF+xwQMTjXnLgkLgdmT/39y7Kzl2wDfpE=";
};
buildInputs = lib.optional useGoogleHashmap sparsehash;
buildFlags = [
"-std=c++11"
"-O3"
"-D NDEBUG"
]
++ lib.optional useCoefficients "-D USE_COEFFICIENTS"
++ lib.optional indicateProgress "-D INDICATE_PROGRESS"
++ lib.optional useGoogleHashmap "-D USE_GOOGLE_HASHMAP"
++ lib.optional (fileFormat == "lowerTriangularCsv") "-D FILE_FORMAT_LOWER_TRIANGULAR_CSV"
++ lib.optional (fileFormat == "upperTriangularCsv") "-D FILE_FORMAT_UPPER_TRIANGULAR_CSV"
++ lib.optional (fileFormat == "dipha") "-D FILE_FORMAT_DIPHA"
;
buildPhase = "c++ ripser.cpp -o ripser $buildFlags";
installPhase = ''
mkdir -p $out/bin
cp ripser $out/bin
'';
meta = {
description = "Lean C++ code for the computation of VietorisRips persistence barcodes";
mainProgram = "ripser";
homepage = "https://github.com/Ripser/ripser";
license = lib.licenses.lgpl3;
maintainers = with lib.maintainers; [erikryb];
platforms = lib.platforms.linux;
};
}