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4a7f99d55d
Part of: https://github.com/NixOS/nixpkgs/issues/108938 meta = with stdenv.lib; is a widely used pattern. We want to slowly remove the `stdenv.lib` indirection and encourage people to use `lib` directly. Thus let’s start with the meta field. This used a rewriting script to mostly automatically replace all occurances of this pattern, and add the `lib` argument to the package header if it doesn’t exist yet. The script in its current form is available at https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
29 lines
886 B
Nix
29 lines
886 B
Nix
{ lib, stdenv, buildPythonPackage, fetchFromGitHub, cython, numpy, pysam, matplotlib, python, isPy27, isPy3k }:
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buildPythonPackage rec {
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version = "0.12.4";
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pname = "HTSeq";
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src = fetchFromGitHub {
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owner = "htseq";
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repo = "htseq";
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rev = "release_${version}";
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sha256 = "0y7vh249sljqjnv81060w4xkdx6f1y5zdqkh38yk926x6v9riijm";
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};
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nativeBuildInputs = [ cython ];
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propagatedBuildInputs = [ numpy pysam matplotlib ];
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checkPhase = stdenv.lib.optionalString isPy27 ''
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${python.interpreter} python2/test/test_general.py
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'' + stdenv.lib.optionalString isPy3k ''
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${python.interpreter} python3/test/test_general.py
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'';
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meta = with lib; {
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homepage = "https://htseq.readthedocs.io/";
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description = "A framework to work with high-throughput sequencing data";
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maintainers = with maintainers; [ unode ];
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platforms = platforms.unix;
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};
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}
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