nixpkgs/pkgs/applications/science/biology/mni_autoreg/default.nix
Profpatsch 4a7f99d55d treewide: with stdenv.lib; in meta -> with lib;
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00

36 lines
1.1 KiB
Nix

{ lib, stdenv, fetchFromGitHub, cmake, makeWrapper, perlPackages, libminc }:
stdenv.mkDerivation rec {
pname = "mni_autoreg";
version = "unstable-2017-09-22";
src = fetchFromGitHub {
owner = "BIC-MNI";
repo = pname;
rev = "ab99e29987dc029737785baebf24896ec37a2d76";
sha256 = "0axl069nv57vmb2wvqq7s9v3bfxwspzmk37bxm4973ai1irgppjq";
};
nativeBuildInputs = [ cmake makeWrapper ];
buildInputs = [ libminc ];
propagatedBuildInputs = with perlPackages; [ perl GetoptTabular MNI-Perllib ];
cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" ];
# testing broken: './minc_wrapper: Permission denied' from Testing/ellipse0.mnc
postFixup = ''
for prog in autocrop mritoself mritotal xfmtool; do
echo $out/bin/$prog
wrapProgram $out/bin/$prog --prefix PERL5LIB : $PERL5LIB;
done
'';
meta = with lib; {
homepage = "https://github.com/BIC-MNI/mni_autoreg";
description = "Tools for automated registration using the MINC image format";
maintainers = with maintainers; [ bcdarwin ];
platforms = platforms.unix;
license = licenses.free;
};
}