R. Ryantm e175a2ea68 diamond: 2.1.3 -> 2.1.4		2023-03-04 15:44:53 +00:00
..
angsd
ants
aragorn
astral
bayescan	treewide: move NIX_CFLAGS_COMPILE to the env attrset	2023-02-22 21:23:04 +02:00
bcftools	bcftools: 1.16 -> 1.17	2023-02-25 23:02:27 +00:00
bedops
bedtools
bftools
blast
bowtie	treewide:replace http by https when https is a permanent redirection	2023-02-19 21:47:59 +01:00
bowtie2
bppsuite
bwa
cd-hit
clustal-omega
cmtk	treewide: move NIX_CFLAGS_COMPILE to the env attrset	2023-02-22 21:23:04 +02:00
conglomerate
dcm2niix
deeptools
delly
diamond	diamond: 2.1.3 -> 2.1.4	2023-03-04 15:44:53 +00:00
dssp
ecopcr
eggnog-mapper
emboss
est-sfs
exonerate
EZminc
fastp
febio-studio
flywheel-cli
freebayes	treewide: move NIX_CFLAGS_COMPILE to the env attrset	2023-02-22 21:23:04 +02:00
gatk
genmap
hisat2
hmmer
igv
inormalize
iqtree
itsx
iv
kallisto
kent
kssd
last
MACS2
macse
mafft
manta
megahit
meme-suite
messer-slim
migrate
minc-tools
minc-widgets
minia	treewide: move NIX_CFLAGS_COMPILE to the env attrset	2023-02-22 21:23:04 +02:00
minimap2
mmseqs2
mni_autoreg
mosdepth
mrbayes
mrtrix
muscle
N3
nest	nest: fix Python & Darwin	2023-02-25 10:28:59 -05:00
neuron	neuron-full: 8.2.1 -> 8.2.2	2023-02-26 05:18:37 +00:00
niftyreg	treewide: move NIX_CFLAGS_COMPILE to the env attrset	2023-02-22 21:23:04 +02:00
niftyseg
obitools
octopus	treewide: move NIX_CFLAGS_COMPILE to the env attrset	2023-02-22 21:23:04 +02:00
paml	treewide: move NIX_CFLAGS_COMPILE to the env attrset	2023-02-22 21:23:04 +02:00
picard-tools	picard-tools: 2.27.5 -> 3.0.0	2023-03-01 14:43:38 +00:00
platypus
plink-ng	treewide: use optionalString	2023-02-13 21:52:34 +01:00
poretools
prodigal
quast	treewide: python{ => .pythonForBuild}.interpreter	2023-02-26 20:26:17 +00:00
raxml
repseek
sambamba
samblaster
samtools
seaview	treewide:replace http by https when https is a permanent redirection	2023-02-19 21:47:59 +01:00
seqkit
seqtk
snpeff
somatic-sniper
sortmerna
spades
sratoolkit
stacks
star
strelka	treewide: move NIX_CFLAGS_COMPILE to the env attrset	2023-02-22 21:23:04 +02:00
subread
sumatools
svaba	treewide: move NIX_CFLAGS_COMPILE to the env attrset	2023-02-22 21:23:04 +02:00
tandem-aligner	tandem-aligner: fix build with GCC 12	2023-02-25 13:40:11 +01:00
tebreak
treemix
trimal
truvari
varscan
vcftools
veryfasttree
whisper
xenomapper