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571c71e6f7
We are migrating packages that meet below requirements:
1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration
The tool is here: https://github.com/Aleksanaa/by-name-migrate.
78 lines
2.5 KiB
Bash
78 lines
2.5 KiB
Bash
preCheckHooks+=('setupMpiCheck')
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preInstallCheckHooks+=('setupMpiCheck')
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setupMpiCheck() {
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# Find out which MPI implementation we are using
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# and set safe defaults that are guaranteed to run
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# on any build machine
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mpiType="NONE"
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# OpenMPI signature
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if command ompi_info &> /dev/null; then
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mpiType="openmpi"
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fi
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# MPICH based implementations
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if command mpichversion &> /dev/null; then
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if [ "$mpiType" != "NONE" ]; then
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echo "WARNING: found OpenMPI and MPICH/MVAPICH executables"
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fi
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version=$(mpichversion)
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if [[ "$version" == *"MPICH"* ]]; then
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mpiType="MPICH"
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fi
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if [[ "$version" == *"MVAPICH"* ]]; then
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mpiType="MVAPICH"
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fi
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fi
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echo "Found MPI implementation: $mpiType"
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case $mpiType in
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openmpi)
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# Note, that openmpi-5 switched to using PRRTE.
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# Thus we need to set PRTE_MCA_* instead of OMPI_MCA_*.
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# We keep the openmpi-4 parameters for backward compatability.
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# Make sure the test starts even if we have less than the requested amount of cores
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export OMPI_MCA_rmaps_base_oversubscribe=1
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export PRTE_MCA_rmaps_default_mapping_policy=node:oversubscribe
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# Make sure we do not need openssh in the checkPhase
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export OMPI_MCA_plm_ssh_agent=false
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export PRRTE_MCA_plm_ssh_agent=false
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# Disable CPU pinning
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export OMPI_MCA_hwloc_base_binding_policy=none
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export PRTE_MCA_hwloc_default_binding_policy=none
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# OpenMPI get confused by the sandbox environment and spew errors like this (both to stdout and stderr):
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# [hwloc/linux] failed to find sysfs cpu topology directory, aborting linux discovery.
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# [1729458724.473282] [localhost:78 :0] tcp_iface.c:893 UCX ERROR scandir(/sys/class/net) failed: No such file or directory
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# These messages contaminate test output, which makes the difftest to fail.
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# The solution is to use a preset cpu topology file and disable ucx model.
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# Disable sysfs cpu topology directory discovery.
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export PRTE_MCA_hwloc_use_topo_file="@topology@"
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# Use the network model ob1 instead of ucx.
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export OMPI_MCA_pml=ob1
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;;
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MPICH)
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# Fix to make mpich run in a sandbox
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export HYDRA_IFACE=lo
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# Disable sysfs cpu topology directory discovery.
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export HWLOC_XMLFILE="@topology@"
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;;
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MVAPICH)
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# Disable CPU pinning
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export MV2_ENABLE_AFFINITY=0
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;;
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esac
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# Limit number of OpenMP threads. Default is "all cores".
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export OMP_NUM_THREADS=1
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}
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