mirror of
https://github.com/NixOS/nixpkgs.git
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233 lines
4.0 KiB
Nix
233 lines
4.0 KiB
Nix
{ sage-src
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, env-locations
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, python
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, buildPythonPackage
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, m4
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, perl
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, pkg-config
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, sage-setup
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, gd
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, iml
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, libpng
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, readline
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, arb
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, blas
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, boost
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, brial
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, cliquer
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, eclib
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, ecm
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, fflas-ffpack
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, flint
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, gap
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, giac
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, givaro
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, glpk
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, gsl
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, lapack
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, lcalc
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, libbraiding
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, libhomfly
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, libmpc
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, linbox
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, lisp-compiler
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, lrcalc
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, m4ri
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, m4rie
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, mpfi
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, mpfr
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, ntl
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, pari
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, planarity
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, ppl
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, rankwidth
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, ratpoints
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, singular
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, sqlite
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, symmetrica
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, cvxopt
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, cypari2
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, cysignals
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, cython
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, fpylll
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, gmpy2
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, importlib-metadata
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, importlib-resources
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, ipykernel
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, ipython
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, ipywidgets
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, jinja2
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, jupyter-client
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, jupyter-core
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, lrcalc-python
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, matplotlib
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, memory-allocator
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, mpmath
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, networkx
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, numpy
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, pexpect
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, pillow
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, pip
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, pkgconfig
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, pplpy
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, primecountpy
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, ptyprocess
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, requests
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, rpy2
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, scipy
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, sphinx
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, sympy
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, typing-extensions
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}:
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assert (!blas.isILP64) && (!lapack.isILP64);
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# This is the core sage python package. Everything else is just wrappers gluing
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# stuff together. It is not very useful on its own though, since it will not
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# find many of its dependencies without `sage-env`, will not be tested without
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# `sage-tests` and will not have html docs without `sagedoc`.
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buildPythonPackage rec {
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version = src.version;
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pname = "sagelib";
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src = sage-src;
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nativeBuildInputs = [
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iml
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lisp-compiler
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m4
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perl
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pip # needed to query installed packages
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pkg-config
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sage-setup
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];
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buildInputs = [
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gd
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iml
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libpng
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readline
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];
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propagatedBuildInputs = [
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# native dependencies (TODO: determine which ones need to be propagated)
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arb
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blas
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boost
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brial
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cliquer
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eclib
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ecm
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fflas-ffpack
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flint
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gap
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giac
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givaro
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glpk
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gsl
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lapack
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lcalc
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libbraiding
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libhomfly
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libmpc
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linbox
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lisp-compiler
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lrcalc
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m4ri
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m4rie
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mpfi
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mpfr
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ntl
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pari
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planarity
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ppl
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rankwidth
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ratpoints
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singular
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sqlite
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symmetrica
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# from src/sage/setup.cfg and requirements.txt
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cvxopt
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cypari2
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cysignals
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cython
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fpylll
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gmpy2
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importlib-metadata
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importlib-resources
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ipykernel
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ipython
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ipywidgets
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jinja2
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jupyter-client
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jupyter-core
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lrcalc-python
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matplotlib
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memory-allocator
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mpmath
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networkx
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numpy
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pexpect
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pillow
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pip
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pkgconfig
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pplpy
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primecountpy
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ptyprocess
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requests
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rpy2
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scipy
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sphinx
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sympy
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typing-extensions
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];
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preBuild = ''
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export SAGE_ROOT="$PWD"
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export SAGE_LOCAL="$SAGE_ROOT"
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export SAGE_SHARE="$SAGE_LOCAL/share"
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# set locations of dependencies (needed for nbextensions like threejs)
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. ${env-locations}/sage-env-locations
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export JUPYTER_PATH="$SAGE_LOCAL/jupyter"
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export PATH="$SAGE_ROOT/build/bin:$SAGE_ROOT/src/bin:$PATH"
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export SAGE_NUM_THREADS="$NIX_BUILD_CORES"
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mkdir -p "$SAGE_SHARE/sage/ext/notebook-ipython"
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mkdir -p "var/lib/sage/installed"
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cd build/pkgs/sagelib
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# some files, like Pipfile, pyproject.toml, requirements.txt and setup.cfg
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# are generated by the bootstrap script using m4. these can fetch data from
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# build/pkgs, either directly or via sage-get-system-packages.
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sed -i '/sage_conf/d' src/setup.cfg.m4
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sed -i '/sage_conf/d' src/requirements.txt.m4
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# version lower bounds are useful, but upper bounds are a hassle because
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# Sage tests already catch any relevant API breakage.
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# according to the discussion at https://trac.sagemath.org/ticket/33520,
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# upper bounds will be less noisy starting from Sage 9.6.
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sed -i 's/==0.5.1/>=0.5.1/' ../ptyprocess/install-requires.txt
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sed -i 's/, <[^, ]*//' ../*/install-requires.txt
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for infile in src/*.m4; do
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if [ -f "$infile" ]; then
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outfile="src/$(basename $infile .m4)"
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m4 "$infile" > "$outfile"
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fi
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done
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cd src
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'';
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postInstall = ''
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rm -r "$out/${python.sitePackages}/sage/cython_debug"
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'';
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doCheck = false; # we will run tests in sage-tests.nix
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}
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