mirror of
https://github.com/NixOS/nixpkgs.git
synced 2024-12-15 18:23:09 +00:00
4a7f99d55d
Part of: https://github.com/NixOS/nixpkgs/issues/108938 meta = with stdenv.lib; is a widely used pattern. We want to slowly remove the `stdenv.lib` indirection and encourage people to use `lib` directly. Thus let’s start with the meta field. This used a rewriting script to mostly automatically replace all occurances of this pattern, and add the `lib` argument to the package header if it doesn’t exist yet. The script in its current form is available at https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
40 lines
855 B
Nix
40 lines
855 B
Nix
{ lib, stdenv, fetchFromGitHub, zlib }:
|
|
|
|
stdenv.mkDerivation rec {
|
|
pname = "star";
|
|
version = "2.7.6a";
|
|
|
|
src = fetchFromGitHub {
|
|
repo = "STAR";
|
|
owner = "alexdobin";
|
|
rev = version;
|
|
sha256 = "1zw9f4jbhz0y51namnmid42pa7pviviy94q9db8w0774nksdf8is";
|
|
};
|
|
|
|
sourceRoot = "source/source";
|
|
|
|
postPatch = ''
|
|
substituteInPlace Makefile --replace "/bin/rm" "rm"
|
|
'';
|
|
|
|
buildInputs = [ zlib ];
|
|
|
|
buildFlags = [ "STAR" "STARlong" ];
|
|
|
|
enableParallelBuilding = true;
|
|
|
|
installPhase = ''
|
|
runHook preInstall
|
|
install -D STAR STARlong -t $out/bin
|
|
runHook postInstall
|
|
'';
|
|
|
|
meta = with lib; {
|
|
description = "Spliced Transcripts Alignment to a Reference";
|
|
homepage = "https://github.com/alexdobin/STAR";
|
|
license = licenses.gpl3Plus;
|
|
platforms = platforms.linux;
|
|
maintainers = [ maintainers.arcadio ];
|
|
};
|
|
}
|