nixpkgs/pkgs/by-name/st/star/package.nix
aleksana 571c71e6f7 treewide: migrate packages to pkgs/by-name, take 1
We are migrating packages that meet below requirements:

1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration

The tool is here: https://github.com/Aleksanaa/by-name-migrate.
2024-11-09 20:04:51 +08:00

40 lines
863 B
Nix

{ lib, stdenv, fetchFromGitHub, zlib }:
stdenv.mkDerivation rec {
pname = "star";
version = "2.7.10b";
src = fetchFromGitHub {
repo = "STAR";
owner = "alexdobin";
rev = version;
sha256 = "sha256-58Y4lzqXwBhRlXcionUg2IhAg5znNUuyr/FsuNZd+5Q=";
};
sourceRoot = "${src.name}/source";
postPatch = ''
substituteInPlace Makefile --replace "/bin/rm" "rm"
'';
buildInputs = [ zlib ];
buildFlags = [ "STAR" "STARlong" ];
enableParallelBuilding = true;
installPhase = ''
runHook preInstall
install -D STAR STARlong -t $out/bin
runHook postInstall
'';
meta = with lib; {
description = "Spliced Transcripts Alignment to a Reference";
homepage = "https://github.com/alexdobin/STAR";
license = licenses.gpl3Plus;
platforms = [ "x86_64-linux" ];
maintainers = [ maintainers.arcadio ];
};
}