nixpkgs/pkgs/applications/science/biology
2024-05-06 10:34:40 -04:00
..
angsd
ants ants: 2.5.0 -> 2.5.1 2024-01-26 01:12:12 +01:00
aragorn treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
astral astral: make deterministic and clean up 2024-03-19 11:24:39 +01:00
bamtools treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
bayescan
bcftools bcftools: 1.19 -> 1.20 2024-04-16 00:22:42 +00:00
bedops
bedtools
bftools
bioawk treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
blast
bowtie
bowtie2 bowtie2: 2.5.2 -> 2.5.3 2024-01-18 01:41:31 +00:00
bppsuite
bwa treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
bwa-mem2 treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
cd-hit
clustal-omega
cmtk treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
conglomerate conglomerate: change license to hpndUc 2024-03-20 20:49:33 +01:00
dcm2niix treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
deeptools deeptools: 3.5.4 -> 3.5.5 2024-03-09 10:06:54 +00:00
delly treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
diamond treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
dssp dssp: 4.4.5 -> 4.4.7 2024-05-03 10:51:52 +09:00
ecopcr
eggnog-mapper eggnog-mapper: 2.1.10 -> 2.1.12 2024-01-18 19:17:47 +00:00
emboss
est-sfs treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
exonerate
EZminc
fastp treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
febio-studio treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
flywheel-cli treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
freebayes
gatk
genmap treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
hh-suite hh-suite: fix build on GCC 13 2024-02-08 21:54:47 +00:00
hisat2
hmmer
igv Merge master into staging-next 2024-05-01 18:01:22 +00:00
inormalize inormalize: fix build on darwin 2024-01-21 23:26:55 +01:00
iqtree iqtree: 2.3.1 -> 2.3.2 2024-04-11 13:08:33 +00:00
itsx treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
iv
jbrowse Merge pull request #306674 from r-ryantm/auto-update/jbrowse 2024-05-04 15:49:20 +02:00
kalign treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
kallisto treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
kent
kssd
last last: 1542 -> 1543 (#307730) 2024-05-01 22:49:48 +02:00
macs2 python312Packages.cython: 0.29.36 -> 3.0.9 2024-03-27 18:35:05 +01:00
macse treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
mafft mafft: enable simple test 2024-04-28 13:57:47 +09:00
manta
megahit megahit: fir gcc-13 build failure 2024-02-10 10:26:43 +00:00
meme-suite
messer-slim messer-slim: 4.2.1 -> 4.2.2 2024-05-06 01:54:25 +00:00
migrate
minc-tools
minc-widgets
minia treewide: remove licenses.agpl3 2024-03-21 18:09:24 +02:00
minimap2 minimap2: 2.27 -> 2.28 2024-04-04 23:45:37 +00:00
mmseqs2 treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
mni_autoreg
mrbayes treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
mrtrix
muscle treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
N3 n3: fix build on darwin 2024-01-21 23:22:54 +01:00
nest nest: fix hash 2024-04-20 10:17:24 +02:00
neuron
niftyreg
niftyseg
obitools treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
octopus treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
paml
picard-tools
platypus
plink-ng treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
poretools
prodigal treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
quast
raxml
repseek treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
sambamba treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
samblaster treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
samtools treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
seaview treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
seqkit seqkit: 2.8.0 -> 2.8.1 2024-04-07 14:35:21 +00:00
seqtk seqtk: fix cross compilation, drop custom installPhase 2024-04-29 17:04:29 -04:00
snpeff
somatic-sniper treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
sortmerna treewide: switch from rocksdb -> rocksdb_8_3 2024-04-22 13:02:14 +02:00
spades SPAdes: fix build 2024-01-20 15:28:48 -03:00
sratoolkit
stacks stacks: 2.65 -> 2.66 2024-01-24 07:54:36 +00:00
star
strelka
subread
sumatools
svaba treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
tandem-aligner
tebreak treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
treemix
trf
trimal
trimmomatic treewide: use stripJavaArchivesHook instead of canonicalize-jars-hook 2024-03-17 13:35:12 +01:00
truvari
varscan
vcftools
veryfasttree treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
whisper whisper: enable parallel building 2024-01-25 19:27:12 +00:00
xenomapper