nixpkgs/pkgs/applications/science/biology
2024-10-18 10:40:57 +00:00
..
angsd
ants treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
aragorn
astral
bamtools treewide: remove refs/tags/ from github release meta.changelog urls 2024-08-29 22:45:00 -04:00
bayescan
bcftools bcftools: 1.20 -> 1.21 2024-09-13 06:20:40 +00:00
bedops
bedtools treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
bftools treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
bioawk
blast treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
bowtie treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
bowtie2 treewide: remove refs/tags/ from github release meta.changelog urls 2024-08-29 22:45:00 -04:00
bppsuite
bwa treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
bwa-mem2 treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
cd-hit
clustal-omega
cmtk cmtk: darwin 2024-10-15 18:48:24 +11:00
conglomerate conglomerate: unstable-2017-09-10 -> unstable-2023-01-19 2024-05-14 14:28:10 +08:00
dcm2niix dcm2niix: 1.0.20230411 -> 1.0.20240202 2024-07-09 10:18:52 -04:00
deeptools
delly delly: 1.2.9 -> 1.3.1 2024-10-09 12:33:11 +00:00
diamond
dssp dssp: 4.4.7 -> 4.4.8 2024-10-07 12:45:50 +00:00
ecopcr
eggnog-mapper
emboss treewide: Remove the definite article from meta.description 2024-06-09 23:08:46 +02:00
est-sfs
exonerate
EZminc ezminc: unstable-2019-03-12 -> unstable-2023-10-06 2024-09-30 21:02:59 -04:00
fastp
flywheel-cli
freebayes
gatk gatk: 4.5.0.0 -> 4.6.0.0 2024-06-30 01:17:34 +00:00
genmap treewide: sha256 -> hash attribute for fetchgit 2024-07-14 19:10:08 +08:00
hh-suite
hisat2
hmmer
igv Only replace actual java commands with the full path 2024-08-29 23:51:23 -07:00
inormalize
iqtree treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
itsx
iv treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
jbrowse jbrowse: 2.15.1 -> 2.15.4 2024-09-26 07:44:23 +00:00
kalign treewide: remove refs/tags/ from github release meta.changelog urls 2024-08-29 22:45:00 -04:00
kallisto kallisto: 0.51.0 -> 0.51.1 2024-09-17 13:16:27 +00:00
kent kent: 467 -> 468 2024-07-16 04:00:44 +00:00
kssd
last last: 1550 -> 1592 2024-10-18 10:40:57 +00:00
macs2 macs2: refactor 2024-06-24 12:18:27 +02:00
macse
mafft mafft: enable simple test 2024-04-28 13:57:47 +09:00
manta
megahit treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
meme-suite
messer-slim messer-slim: 4.2.2 -> 4.3 2024-09-18 08:31:41 -04:00
migrate treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
minc-tools minc-tools: unstable-2020-07-25 -> 2.3.06-unstable-2023-08-12 2024-09-07 13:57:40 -04:00
minc-widgets
minia
minimap2 treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
mmseqs2
mni_autoreg
mrbayes treewide: remove unused with statements from maintainer lists 2024-07-29 10:06:20 +08:00
mrtrix treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
muscle treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
N3
nest treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
neuron treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
niftyreg
niftyseg
obitools treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
octopus
paml treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
picard-tools picard-tools: 3.2.0 -> 3.3.0 2024-10-10 04:19:53 +00:00
platypus treewide: Remove the definite article from meta.description 2024-06-09 23:08:46 +02:00
plink-ng treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
prodigal
quast
raxml treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
repseek treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
sambamba treewide: sha256 -> hash attribute for fetchgit 2024-07-14 19:10:08 +08:00
samblaster
samtools pkgs/applications: remove uneeded fetchpatch arguments 2024-05-21 03:12:20 +02:00
seaview
seqkit seqkit: 2.8.1 -> 2.8.2 2024-05-18 00:57:59 +00:00
seqtk seqtk: fix cross compilation, drop custom installPhase 2024-04-29 17:04:29 -04:00
snpeff
somatic-sniper
sortmerna treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
stacks stacks: 2.66 -> 2.68 2024-10-14 03:53:28 +00:00
star
strelka
subread subread: 2.0.6 -> 2.0.7 2024-10-14 03:01:38 +00:00
sumatools
svaba treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
tebreak
treemix
trf
trimal trimal: 1.4.1 -> 1.5.0 2024-07-02 19:20:38 +00:00
trimmomatic treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
truvari truvari: 4.1.0 -> 4.2.2 2024-07-04 21:38:05 +09:00
varscan
vcftools treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
veryfasttree veryfasttree: 4.0.3 -> 4.0.4 2024-09-17 20:29:50 +00:00
whisper treewide: replace stdenv.is with stdenv.hostPlatform.is 2024-09-25 00:04:37 +03:00
xenomapper treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00