nixpkgs/pkgs/applications/science/math/sage/sagelib.nix
2024-05-10 21:51:12 +02:00

223 lines
3.3 KiB
Nix

{ sage-src
, env-locations
, python
, buildPythonPackage
, m4
, perl
, pkg-config
, sage-setup
, pythonRelaxDepsHook
, gd
, iml
, libpng
, readline
, blas
, boost
, brial
, cliquer
, eclib
, ecm
, fflas-ffpack
, flint3
, gap
, giac
, givaro
, glpk
, gsl
, lapack
, lcalc
, libbraiding
, libhomfly
, libmpc
, linbox
, lisp-compiler
, lrcalc
, m4ri
, m4rie
, mpfi
, mpfr
, ntl
, pari
, planarity
, ppl
, rankwidth
, ratpoints
, singular
, sqlite
, symmetrica
, conway-polynomials
, cvxopt
, cypari2
, cysignals
, cython
, fpylll
, gmpy2
, importlib-metadata
, importlib-resources
, ipykernel
, ipython
, ipywidgets
, jinja2
, jupyter-client
, jupyter-core
, lrcalc-python
, matplotlib
, memory-allocator
, mpmath
, networkx
, numpy
, pexpect
, pillow
, pip
, pkgconfig
, pplpy
, primecountpy
, ptyprocess
, requests
, rpy2
, scipy
, sphinx
, sympy
, typing-extensions
, nbclassic
}:
assert (!blas.isILP64) && (!lapack.isILP64);
# This is the core sage python package. Everything else is just wrappers gluing
# stuff together. It is not very useful on its own though, since it will not
# find many of its dependencies without `sage-env`, will not be tested without
# `sage-tests` and will not have html docs without `sagedoc`.
buildPythonPackage rec {
version = src.version;
pname = "sagelib";
src = sage-src;
pyproject = true;
nativeBuildInputs = [
iml
lisp-compiler
m4
perl
pip # needed to query installed packages
pkg-config
sage-setup
pythonRelaxDepsHook
];
pythonRelaxDeps = [
"networkx"
];
buildInputs = [
gd
iml
libpng
readline
];
propagatedBuildInputs = [
# native dependencies (TODO: determine which ones need to be propagated)
blas
boost
brial
cliquer
eclib
ecm
fflas-ffpack
flint3
gap
giac
givaro
glpk
gsl
lapack
lcalc
libbraiding
libhomfly
libmpc
linbox
lisp-compiler
lrcalc
m4ri
m4rie
mpfi
mpfr
ntl
pari
planarity
ppl
rankwidth
ratpoints
singular
sqlite
symmetrica
# from src/sage/setup.cfg and requirements.txt
conway-polynomials
cvxopt
cypari2
cysignals
cython
fpylll
gmpy2
importlib-metadata
importlib-resources
ipykernel
ipython
ipywidgets
jinja2
jupyter-client
jupyter-core
lrcalc-python
matplotlib
memory-allocator
mpmath
networkx
numpy
pexpect
pillow
pip
pkgconfig
pplpy
primecountpy
ptyprocess
requests
rpy2
scipy
sphinx
sympy
typing-extensions
nbclassic
];
preBuild = ''
export SAGE_ROOT="$PWD"
export SAGE_LOCAL="$SAGE_ROOT"
export SAGE_SHARE="$SAGE_LOCAL/share"
# set locations of dependencies (needed for nbextensions like threejs)
. ${env-locations}/sage-env-locations
export JUPYTER_PATH="$SAGE_LOCAL/jupyter"
export PATH="$SAGE_ROOT/build/bin:$SAGE_ROOT/src/bin:$PATH"
export SAGE_NUM_THREADS="$NIX_BUILD_CORES"
mkdir -p "$SAGE_SHARE/sage/ext/notebook-ipython"
mkdir -p "var/lib/sage/installed"
sed -i "/sage-conf/d" src/{setup.cfg,pyproject.toml,requirements.txt}
cd build/pkgs/sagelib/src
'';
postInstall = ''
rm -r "$out/${python.sitePackages}/sage/cython_debug"
'';
doCheck = false; # we will run tests in sage-tests.nix
}