mirror of
https://github.com/NixOS/nixpkgs.git
synced 2024-12-03 20:33:21 +00:00
571c71e6f7
We are migrating packages that meet below requirements:
1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration
The tool is here: https://github.com/Aleksanaa/by-name-migrate.
32 lines
1.0 KiB
Nix
32 lines
1.0 KiB
Nix
{ lib, stdenv, fetchFromGitHub }:
|
|
|
|
stdenv.mkDerivation rec {
|
|
pname = "mrbayes";
|
|
version = "3.2.7a";
|
|
|
|
src = fetchFromGitHub {
|
|
owner = "NBISweden";
|
|
repo = "MrBayes";
|
|
rev = "v${version}";
|
|
sha256 = "sha256-pkkxZ6YHRn/I1SJpT9A+EK4S5hWGmFdcDBJS0zh5mLA=";
|
|
};
|
|
|
|
meta = with lib; {
|
|
description = "Bayesian Inference of Phylogeny";
|
|
mainProgram = "mb";
|
|
longDescription = ''
|
|
Bayesian inference of phylogeny is based upon a
|
|
quantity called the posterior probability distribution of trees, which is
|
|
the probability of a tree conditioned on the observations. The conditioning
|
|
is accomplished using Bayes's theorem. The posterior probability
|
|
distribution of trees is impossible to calculate analytically; instead,
|
|
MrBayes uses a simulation technique called Markov chain Monte Carlo (or
|
|
MCMC) to approximate the posterior probabilities of trees.
|
|
'';
|
|
maintainers = [ ];
|
|
license = licenses.gpl2Plus;
|
|
homepage = "https://nbisweden.github.io/MrBayes/";
|
|
platforms = platforms.linux;
|
|
};
|
|
}
|