nixpkgs/pkgs/applications/science/biology
2024-09-03 15:17:57 -04:00
..
angsd
ants ants: 2.5.2 -> 2.5.3 2024-07-25 02:08:42 +00:00
aragorn treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
astral astral: make deterministic and clean up 2024-03-19 11:24:39 +01:00
bamtools treewide: remove refs/tags/ from github release meta.changelog urls 2024-08-29 22:45:00 -04:00
bayescan
bcftools bcftools: 1.19 -> 1.20 2024-04-16 00:22:42 +00:00
bedops
bedtools treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
bftools treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
bioawk treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
blast
bowtie treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
bowtie2 treewide: remove refs/tags/ from github release meta.changelog urls 2024-08-29 22:45:00 -04:00
bppsuite
bwa treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
bwa-mem2 treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
cd-hit
clustal-omega
cmtk treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
conglomerate conglomerate: unstable-2017-09-10 -> unstable-2023-01-19 2024-05-14 14:28:10 +08:00
dcm2niix dcm2niix: 1.0.20230411 -> 1.0.20240202 2024-07-09 10:18:52 -04:00
deeptools deeptools: 3.5.4 -> 3.5.5 2024-03-09 10:06:54 +00:00
delly treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
diamond treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
dssp treewide: remove refs/tags/ from github release meta.changelog urls 2024-08-29 22:45:00 -04:00
ecopcr
eggnog-mapper
emboss treewide: Remove the definite article from meta.description 2024-06-09 23:08:46 +02:00
est-sfs treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
exonerate
EZminc
fastp treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
flywheel-cli treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
freebayes
gatk gatk: 4.5.0.0 -> 4.6.0.0 2024-06-30 01:17:34 +00:00
genmap treewide: sha256 -> hash attribute for fetchgit 2024-07-14 19:10:08 +08:00
hh-suite hh-suite: fix build on GCC 13 2024-02-08 21:54:47 +00:00
hisat2
hmmer
igv treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
inormalize inormalize: fix build on darwin 2024-01-21 23:26:55 +01:00
iqtree iqtree: 2.3.4 -> 2.3.5 2024-06-30 14:49:34 +00:00
itsx treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
iv
jbrowse jbrowse: 2.13.1 -> 2.14.0 2024-08-29 04:33:48 +00:00
kalign treewide: remove refs/tags/ from github release meta.changelog urls 2024-08-29 22:45:00 -04:00
kallisto kallisto: 0.50.1 -> 0.51.0 2024-08-02 11:16:03 +00:00
kent kent: 467 -> 468 2024-07-16 04:00:44 +00:00
kssd
last last: 1548 -> 1550 2024-07-23 00:58:03 +00:00
macs2 macs2: refactor 2024-06-24 12:18:27 +02:00
macse treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
mafft mafft: enable simple test 2024-04-28 13:57:47 +09:00
manta
megahit treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
meme-suite
messer-slim treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
migrate treewide: fix uses of finalAttrs.pname in source urls 2024-07-12 20:23:39 -04:00
minc-tools
minc-widgets
minia treewide: remove licenses.agpl3 2024-03-21 18:09:24 +02:00
minimap2 treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
mmseqs2 treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
mni_autoreg
mrbayes treewide: remove unused with statements from maintainer lists 2024-07-29 10:06:20 +08:00
mrtrix
muscle treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
N3
nest nest: 3.7 -> 3.8 2024-08-03 02:21:53 +00:00
neuron python312Packages.neuronpy: 8.2.4 -> 8.2.6 2024-07-25 15:04:43 +00:00
niftyreg
niftyseg
obitools treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
octopus treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
paml treewide: remove refs/tags/ from github release meta.changelog urls 2024-08-29 22:45:00 -04:00
picard-tools picard-tools: 3.1.1 -> 3.2.0 2024-06-28 01:41:05 +00:00
platypus treewide: Remove the definite article from meta.description 2024-06-09 23:08:46 +02:00
plink-ng treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
prodigal treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
quast
raxml treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
repseek treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
sambamba treewide: sha256 -> hash attribute for fetchgit 2024-07-14 19:10:08 +08:00
samblaster treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
samtools pkgs/applications: remove uneeded fetchpatch arguments 2024-05-21 03:12:20 +02:00
seaview treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
seqkit seqkit: 2.8.1 -> 2.8.2 2024-05-18 00:57:59 +00:00
seqtk seqtk: fix cross compilation, drop custom installPhase 2024-04-29 17:04:29 -04:00
snpeff
somatic-sniper treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
sortmerna treewide: switch from rocksdb -> rocksdb_8_3 2024-04-22 13:02:14 +02:00
stacks stacks: 2.65 -> 2.66 2024-01-24 07:54:36 +00:00
star
strelka
subread
sumatools
svaba treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
tebreak treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
treemix
trf
trimal trimal: 1.4.1 -> 1.5.0 2024-07-02 19:20:38 +00:00
trimmomatic treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
truvari truvari: 4.1.0 -> 4.2.2 2024-07-04 21:38:05 +09:00
varscan
vcftools treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00
veryfasttree treewide: add meta.mainProgram to packages with a single binary 2024-03-19 03:14:51 +01:00
whisper treewide: remove unused occurence of fetchurl argument 2024-05-20 05:20:23 +02:00
xenomapper treewide: Remove indefinite article from meta.description 2024-06-09 23:07:45 +02:00