nixpkgs/pkgs/by-name/mu/muscle/package.nix
aleksana 571c71e6f7 treewide: migrate packages to pkgs/by-name, take 1
We are migrating packages that meet below requirements:

1. using `callPackage`
2. called path is a directory
3. overriding set is empty (`{ }`)
4. not containing path expressions other than relative path (to
makenixpkgs-vet happy)
5. not referenced by nix files outside of the directory, other
than`pkgs/top-level/all-packages.nix`
6. not referencing nix files outside of the directory
7. not referencing `default.nix` (since it's changed to `package.nix`)
8. `outPath` doesn't change after migration

The tool is here: https://github.com/Aleksanaa/by-name-migrate.
2024-11-09 20:04:51 +08:00

39 lines
859 B
Nix

{ lib, gccStdenv, fetchFromGitHub }:
gccStdenv.mkDerivation rec {
pname = "muscle";
version = "5.1.0";
src = fetchFromGitHub {
owner = "rcedgar";
repo = pname;
rev = version;
hash = "sha256-NpnJziZXga/T5OavUt3nQ5np8kJ9CFcSmwyg4m6IJsk=";
};
sourceRoot = "${src.name}/src";
patches = [
./muscle-darwin-g++.patch
];
installPhase =
let
target =
if gccStdenv.hostPlatform.isDarwin
then "Darwin"
else "Linux";
in
''
install -m755 -D ${target}/muscle $out/bin/muscle
'';
meta = with lib; {
description = "Multiple sequence alignment with top benchmark scores scalable to thousands of sequences";
mainProgram = "muscle";
license = licenses.gpl3Plus;
homepage = "https://www.drive5.com/muscle/";
maintainers = with maintainers; [ unode thyol ];
};
}