{ lib, stdenv, fetchFromGitHub, cmake, makeWrapper, perlPackages, libminc, EBTKS }: stdenv.mkDerivation rec { pname = "inormalize"; name = "${pname}-2014-10-21"; src = fetchFromGitHub { owner = "BIC-MNI"; repo = pname; rev = "79cea9cdfe7b99abfd40afda89ab2253b596ad2f"; sha256 = "1ahqv5q0ljvji99a5q8azjkdf6bgp6nr8lwivkqwqs3jm0k5clq7"; }; patches = [ ./lgmask-interp.patch ./nu_correct_norm-interp.patch ]; nativeBuildInputs = [ cmake makeWrapper ]; buildInputs = [ libminc EBTKS ]; propagatedBuildInputs = with perlPackages; [ perl GetoptTabular MNI-Perllib ]; cmakeFlags = [ "-DLIBMINC_DIR=${libminc}/lib/cmake" "-DEBTKS_DIR=${EBTKS}/lib/" ]; postFixup = '' for p in $out/bin/*; do wrapProgram $p --prefix PERL5LIB : $PERL5LIB done ''; meta = with lib; { homepage = "https://github.com/BIC-MNI/${pname}"; description = "Program to normalize intensity of MINC files"; maintainers = with maintainers; [ bcdarwin ]; platforms = platforms.unix; license = licenses.free; }; }