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15 Commits

Author SHA1 Message Date
Guillaume Girol
33afbf39f6 treewide: switch to nativeCheckInputs 
checkInputs used to be added to nativeBuildInputs. Now we have
nativeCheckInputs to do that instead. Doing this treewide change allows
to keep hashes identical to before the introduction of
nativeCheckInputs.
 2023-01-21 12:00:00 +00:00
Ben Darwin
287131c409 ocamlPackages.phylogenetics: run full test suite 
As of upstream commit
a107e96fa6
, the full tests using `bppsuite`, although barely longer than the short
tests, were not being run.
 2022-11-22 10:02:45 +01:00
Aaron L. Zeng
4f6ddfdd23 Add Jane Street ocaml packages version 0.15 
- ocamlPackages.tls*: 0.15.2 -> 0.15.3
- ocamlPackages.bistro: unstable-2021-11-13 -> unstable-2022-05-07
- ocamlPackages.phylogenetics: 0.1.0 -> unstable-2022-05-06
 2022-07-07 00:32:11 -04:00
Malo Bourgon
f7ef6329bb ocamlPackages: add meta.mainProgram to many packages 2022-05-14 11:31:07 +02:00
Aaron L. Zeng
983a9f4bb6 ocamlPackages.phylogenetics: 0.0.0 -> 0.1.0 2022-04-12 16:02:48 +02:00
Vincent Laporte
ecd0acf293 ocamlPackages.printbox: 0.5 → 0.6 
ocamlPackages.printbox-text: init at 0.6
 2022-02-02 07:31:55 +01:00
Ben Darwin
2d47affbfb ocamlPackages.phylogenetics: unstable-2020-11-23 -> 0.0.0 2021-11-12 20:21:29 +01:00
Pavol Rusnak
a6ce00c50c
treewide: remove stdenv where not needed 2021-01-25 18:31:47 +01:00
Profpatsch
4a7f99d55d treewide: with stdenv.lib; in meta -> with lib; 
Part of: https://github.com/NixOS/nixpkgs/issues/108938

meta = with stdenv.lib;

is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.

This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.

The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
 2021-01-11 10:38:22 +01:00
Vincent Laporte
b6f7f1f673 ocamlPackages.janeStreet: 0.13 → 0.14 
ocamlPackages.biocaml: 0.10.1 → 0.11.1

ocamlPackages.bistro: fix for Core 0.14

ocamlPackages.js_of_ocaml: 3.7.0 → 3.7.1

ocamlPackages.ocaml-r: 0.2.0 → 0.4.0

ocamlPackages.phylogenetics: 2020-01-25 → 2020-11-23

Co-authored-by: sternenseemann <0rpkxez4ksa01gb3typccl0i@systemli.org>
 2020-12-18 21:03:56 +01:00
Vincent Laporte
3e7a2b9147 ocamlPackages.janeStreet: 0.12 → 0.13 
ocamlPackages.bistro: fix for core-0.13
ocamlPackages.phylogenetics: 2020-01-05 → 2020-01-25
 2020-04-20 08:38:31 +02:00
Vincent Laporte
34db9b5ee3 ocamlPackages.phylogenetics: 2019-11-15 → 2020-01-05 2020-04-01 17:29:30 +02:00
Vincent Laporte
0229936bbe buildDunePackage: add a “useDune2” option 2020-03-23 09:12:50 +01:00
Ben Darwin
fd9b40d076 ocamlPackages_latest.phylogenetics: dune2/fix meta 2020-02-27 12:22:14 -05:00
Ben Darwin
3fa5a19cf8 ocamlPackages_latest.phylogenetics: init at unstable-2019-11-15 2019-12-06 12:00:44 -05:00