Commit Graph

7517 Commits

Author SHA1 Message Date
R. Ryantm
8fcdc3f62c varscan: 2.4.5 -> 2.4.6 2023-04-05 14:55:31 +00:00
Ellie Hermaszewska
bd54a9047d
tamarin-prover: Allow compiling with maude-3.3 2023-04-05 14:39:55 +08:00
Ryan Lahfa
ce35e61c3c
Merge pull request #221099 from evils/kicad
kicad(-unstable): bump to latest version, cleanup and fixes
2023-04-04 13:28:26 +02:00
Shamrock Lee
4e72d111e9 raspa: init at 2.0.47 and add tests 2023-04-03 20:53:23 +08:00
Weijia Wang
64a5b00d02
Merge pull request #224462 from wegank/scalp-mirror
scalp: update mirror link
2023-04-03 14:48:41 +03:00
Weijia Wang
4ad85a5c10 scalp: update mirror link 2023-04-03 14:16:03 +03:00
Tobias Markus
eae9398010 clp: Change license to epl20 2023-04-03 12:57:50 +02:00
Weijia Wang
150dcd7ce7
Merge pull request #224345 from natsukium/blast/darwin
blast-bin: init at 2.13.0
2023-04-03 09:59:08 +03:00
natsukium
cddb4a24ba
blast-bin: init at 2.13.0 2023-04-03 12:39:17 +09:00
Nick Cao
7613d23e78
Merge pull request #224414 from jbedo/last
last: 1447 -> 1453
2023-04-03 09:43:13 +08:00
Justin Bedo
e739dc5088
last: 1447 -> 1453 2023-04-03 08:38:27 +10:00
Vincenzo Mantova
acb02e2fab eukleides: move texlive dependencies to tlDeps 2023-04-02 13:00:52 +01:00
Tobias Markus
1718fc0b04 clp: 1.17.6 -> 1.17.7 2023-04-02 14:00:47 +02:00
Weijia Wang
4213fc7cde sasview: fix build 2023-04-02 15:00:07 +03:00
Vincenzo Mantova
6b2b9a0de3 eukleides: create pkgs fixpoint for texlive using mkDerivation 2023-04-02 12:58:47 +01:00
Nicolas Benes
c59f6c75b6 openroad: unstable-2022-07-19 -> unstable-2023-03-31 2023-04-02 05:44:19 +02:00
natsukium
5ac95120d5
pymol: remove broken mark for darwin
The bug has been resolved by changing the backend to Qt
in this commit, ab3f0771a4.
2023-04-01 20:41:01 +09:00
Michal Sojka
b1cb42d3b7 cppzmq: make zeromq propagatedBuildInput
cppzmq is a header-only library. As such, it is not much useful
without zeromq, whose headers it includes. By having zeromq in
propagatedBuildInputs, we can simplify dependent expressions.

This change is motivated by
https://github.com/lopsided98/nix-ros-overlay/issues/255#issuecomment-1487590226.
The expressions in nix-ros-overlay are automatically generated and
since packages in other distributions where ROS runs need not to
explicitly depend on zeromq, the Nix expression should behave the
same. This way, nix-ros-overlay will not to have manually
patch/overlay the automatically generated expressions.
2023-03-31 18:58:56 +02:00
Evils
23849267ee kicad-unstable: fix ngspice tests 2023-03-30 18:53:53 +02:00
MarcFontaine
2cfc128ca3
nanovna-saver: 0.5.4 -> 0.6.0 2023-03-30 10:58:55 +02:00
Evils
4f0de9463a kicad-unstable: 2023-02-14 -> 2023-03-29
includes a fix for upstream issue 14346
  (attempting to installing pcbnew.py outside of $out)
2023-03-30 09:22:08 +02:00
Nick Cao
2f73fede2a
calcmysky: unstable-2023-02-11 -> 0.3.0
Diff: c5f2814528...v0.3.0
2023-03-29 19:29:46 +08:00
Weijia Wang
626401c783
Merge pull request #220832 from wegank/glucose-bump
glucose: 4.1 -> 4.2.1
2023-03-29 09:13:21 +03:00
Weijia Wang
396b3b7271
Merge pull request #223075 from r-ryantm/auto-update/ginac
ginac: 1.8.5 -> 1.8.6
2023-03-29 00:27:26 +03:00
Mauricio Collares
a4f8bf2248
Merge pull request #223497 from r-ryantm/auto-update/primecount
primecount: 7.6 -> 7.7
2023-03-28 20:28:02 +02:00
Evils
7f3a08710a kicad: add requests runtime dependency
required for some of the plugins
2023-03-28 18:57:29 +02:00
Evils
d8020e1e17 kicad: remove withOCC and more cmakeFlags cleanup
OCC is no longer optional
RPATH apparently no longer contains references to /build/
KICAD_SCRIPTING_WXPYTHON is ON by default

sort some of the options a bit

and remove stray lndir
2023-03-28 18:57:29 +02:00
Evils
788df5456b kicad: 7.0.0 -> 7.0.1
remove now integrated patches
2023-03-28 18:57:29 +02:00
Weijia Wang
eac1ecb55a
Merge pull request #222531 from r-ryantm/auto-update/sumo
sumo: 1.15.0 -> 1.16.0
2023-03-28 16:47:07 +03:00
Nick Cao
98f3b08f58
Merge pull request #223453 from kilianar/stellarium-23.1
stellarium: 1.2 -> 23.1
2023-03-28 18:29:13 +08:00
Ali Caglayan
8fe1ea496b coq: 8.16.1 -> 8.17.0
Signed-off-by: Ali Caglayan <alizter@gmail.com>
2023-03-28 08:13:12 +02:00
R. Ryantm
3b3cc65701 primecount: 7.6 -> 7.7 2023-03-28 04:37:03 +00:00
kilianar
d19f5dedec stellarium: 1.2 -> 23.1
https://github.com/Stellarium/stellarium/releases/tag/v23.1

Mitigates https://github.com/advisories/GHSA-7vmm-m8vp-g5h3
2023-03-28 00:22:36 +02:00
kilianar
733e7c52c2 calcmysky: 0.2.1 -> unstable-203-02-11 2023-03-28 00:03:32 +02:00
Weijia Wang
c9d051b17d
Merge pull request #222979 from r-ryantm/auto-update/cvc5
cvc5: 1.0.4 -> 1.0.5
2023-03-27 09:36:32 +03:00
Sandro
c2ef479b62
Merge pull request #168773 from Leixb/megam-add-opt 2023-03-27 00:59:44 +02:00
Justin Bedő
c39e3d9b74
Merge pull request #221546 from NixOS/r-updates
R: 4.2.2 -> 4.2.3
2023-03-26 21:40:30 +00:00
github-actions[bot]
07fb9cae4e
Merge master into staging-next 2023-03-26 00:02:45 +00:00
Artturi
b213126ec0
Merge pull request #222766 from Artturin/fix-different-store 2023-03-25 22:17:07 +02:00
R. Ryantm
2cb2ee9630 ginac: 1.8.5 -> 1.8.6 2023-03-25 14:10:42 +00:00
R. Ryantm
bb270775f2 cvc5: 1.0.4 -> 1.0.5 2023-03-25 01:00:12 +00:00
github-actions[bot]
cead7e3e73
Merge master into staging-next 2023-03-25 00:02:20 +00:00
Weijia Wang
2ce97f2bf9
Merge pull request #222464 from r-ryantm/auto-update/diamond
diamond: 2.1.5 -> 2.1.6
2023-03-24 20:56:17 +02:00
Artturin
780669daf5 treewide: don't hardcode /nix/store (no rebuilds changes)
improve experience for other store locations
2023-03-24 20:11:33 +02:00
github-actions[bot]
adec6862c5
Merge master into staging-next 2023-03-24 18:01:06 +00:00
LeixB
d443805fe3
megam: add leixb as maintainer 2023-03-24 18:52:48 +01:00
LeixB
d85fae35d9
megam: add megam.opt binary
- Add megam.opt (optimized native binary)
2023-03-24 18:52:14 +01:00
Vladimír Čunát
1f1c1739d7
Merge #222442: R: override test for curl version
...into staging-next
2023-03-23 11:07:36 +01:00
R. Ryantm
d2bf9653de gretl: 2022c -> 2023a 2023-03-23 06:03:08 +00:00
github-actions[bot]
85f7b5276e
Merge master into staging-next 2023-03-22 18:01:11 +00:00
Luflosi
ddb714f68d
yices: fix typo in comment 2023-03-22 16:08:09 +01:00
Weijia Wang
120a484726
Merge pull request #220001 from wegank/isabelle-arm
isabelle: add aarch64-linux support
2023-03-22 16:15:34 +02:00
R. Ryantm
91c2c00aad sumo: 1.15.0 -> 1.16.0 2023-03-22 12:07:12 +00:00
github-actions[bot]
0537539006
Merge master into staging-next 2023-03-22 12:01:22 +00:00
Nick Cao
6c4095e7af
Merge pull request #222331 from r-ryantm/auto-update/seqkit
seqkit: 2.3.1 -> 2.4.0
2023-03-22 16:08:39 +08:00
R. Ryantm
4c2324cf14 diamond: 2.1.5 -> 2.1.6 2023-03-22 03:09:40 +00:00
MaxHearnden
bfbc0f56e5 override test for curl version 2023-03-21 22:50:14 +00:00
Vincent Laporte
48774c43cd
acgtk: use Dune 3 2023-03-21 13:05:53 +01:00
R. Ryantm
a6f33bd62f seqkit: 2.3.1 -> 2.4.0 2023-03-21 10:45:22 +00:00
github-actions[bot]
bb48723d63
Merge master into staging-next 2023-03-21 00:02:39 +00:00
Vincent Laporte
e12230e716
why3: 1.5.1 → 1.6.0; ocamlPackages.lambdapi: 2.2.1 → 2.3.1 (#220986)
why3: 1.5.1 → 1.6.0
ocamlPackages.lambdapi: 2.2.1 → 2.3.1

Co-authored-by: Weijia Wang <9713184+wegank@users.noreply.github.com>
2023-03-20 20:45:47 +01:00
Martin Weinelt
9959ec97f8
Merge remote-tracking branch 'origin/master' into staging-next
Conflicts:
- pkgs/development/python-modules/wxPython/4.0.nix
- pkgs/development/python-modules/wxPython/4.1.nix
2023-03-20 15:07:36 +01:00
Weijia Wang
802b7ac3e7
Merge pull request #221743 from r-ryantm/auto-update/gatk
gatk: 4.3.0.0 -> 4.4.0.0
2023-03-20 14:33:37 +02:00
github-actions[bot]
96f7385465
Merge master into staging-next 2023-03-20 00:02:29 +00:00
Mauricio Collares
bd3de7859d
Merge pull request #221718 from wegank/sage-fix
sage: add libpng to sagelib, import package update patches
2023-03-19 19:31:02 +01:00
github-actions[bot]
84c97a9e91
Merge master into staging-next 2023-03-19 18:00:59 +00:00
Weijia Wang
2572ddc706
Merge pull request #221977 from wegank/mavproxy-wx
mavproxy: migrate to wxPython_4_2
2023-03-19 20:00:39 +02:00
Weijia Wang
a1e27cf0e9 sage: add libpng to sagelib 2023-03-19 19:33:36 +02:00
Mauricio Collares
c13d98c7bf sage: import python package upgrade fixes 2023-03-19 19:32:56 +02:00
natsukium
21affa5ff1
trf: init at 4.09.1 2023-03-19 22:25:42 +09:00
Weijia Wang
4fe9738427 mavproxy: migrate to wxPython_4_2 2023-03-19 10:29:51 +02:00
github-actions[bot]
c70342c89c
Merge master into staging-next 2023-03-19 00:02:27 +00:00
Weijia Wang
7574e25ef3
Merge pull request #221864 from natsukium/mafft/update
mafft: 7.508 -> 7.515
2023-03-19 00:03:19 +02:00
Weijia Wang
8da8071e37 glucose: 4.1 -> 4.2.1 2023-03-18 22:17:16 +02:00
github-actions[bot]
403b148aa5
Merge master into staging-next 2023-03-18 18:01:02 +00:00
Weijia Wang
0ddc01c569 glucose: refactor 2023-03-18 19:00:45 +02:00
natsukium
f3b75ef3ce
mafft: 7.508 -> 7.515 2023-03-19 00:42:29 +09:00
Weijia Wang
f15cf7e6af
Merge pull request #221809 from wegank/nest-bump
nest: 3.3 -> 3.4
2023-03-18 17:17:18 +02:00
github-actions[bot]
a912b83051
Merge master into staging-next 2023-03-18 12:01:30 +00:00
Weijia Wang
b45fe715d9
Merge pull request #217922 from r-ryantm/auto-update/openboardview
openboardview: 9.0.3 -> 9.95.0
2023-03-18 13:00:52 +02:00
Fabian Affolter
109f8ccdfe
nest: specify license 2023-03-18 11:23:52 +01:00
Fabian Affolter
c7ec291235
nest: add changelog to meta 2023-03-18 11:23:06 +01:00
Weijia Wang
ea847dd1a0 nest: 3.3 -> 3.4 2023-03-18 12:13:46 +02:00
R. Ryantm
0d44f838ca gatk: 4.3.0.0 -> 4.4.0.0 2023-03-18 01:10:14 +00:00
K900
a5a292c7a8 treewide: clear out remaining qt5 conditionals 2023-03-18 02:10:20 +03:00
github-actions[bot]
d761f69867
Merge master into staging-next 2023-03-17 17:57:00 +00:00
Markus Kowalewski
545b5d04f4
openmolcas: 22.10 -> 23.02 2023-03-17 13:33:41 +01:00
github-actions[bot]
2394986204
Merge master into staging-next 2023-03-17 12:01:17 +00:00
Weijia Wang
9c8a92bcde
Merge pull request #205310 from r-ryantm/auto-update/sumo
sumo: 1.9.2 -> 1.15.0
2023-03-17 12:56:48 +02:00
github-actions[bot]
f5629a4518
Merge master into staging-next 2023-03-17 06:01:16 +00:00
Weijia Wang
854414836c
Merge pull request #221529 from wegank/qalculate-qt-darwin
qalculate-qt: add darwin support
2023-03-17 07:47:56 +02:00
Justin Bedő
bf32c70253
Merge pull request #221559 from r-ryantm/auto-update/subread
subread: 2.0.3 -> 2.0.4
2023-03-17 01:57:57 +00:00
github-actions[bot]
6746017444
Merge master into staging-next 2023-03-17 00:02:33 +00:00
R. Ryantm
2a35b86739 subread: 2.0.3 -> 2.0.4 2023-03-16 23:09:44 +00:00
markuskowa
0fea9287f4
Merge pull request #221301 from sheepforce/plumed
plumed: init at 2.8.2
2023-03-16 20:43:54 +01:00
Weijia Wang
5c214fb163 qalculate-qt: add darwin support 2023-03-16 21:31:51 +02:00
github-actions[bot]
455127ad5e
Merge master into staging-next 2023-03-16 18:01:20 +00:00
Weijia Wang
183c970c9a
Merge pull request #221403 from r-ryantm/auto-update/gama
gama: 2.23 -> 2.24
2023-03-16 18:03:12 +02:00
Weijia Wang
de6210e074
Merge pull request #217539 from GenericNerdyUsername/horizon-occ
horizon-eda: switch from OCE to OCC
2023-03-16 17:20:47 +02:00
Bernardo Meurer
6e55733359
Merge pull request #219747 from Stunkymonkey/deprecate-isNull 2023-03-16 11:10:22 -03:00