Mauricio Collares
4e4d962445
lean: 3.49.1 -> 3.50.0
2022-12-15 09:46:06 -03:00
Mauricio Collares
1ea8eab31e
lean: 3.49.0 -> 3.49.1
2022-12-15 09:46:01 -03:00
Nicolas Benes
4cbba917e0
dataexplorer: 3.6.2 -> 3.7.3
...
In v3.7.1, the `file.encoding=UTF-8` setting has been moved into the
application itself. It is not needed any more to pass it via the `java`
command line.
The program builds incorrectly for non-x86_64-linux platforms, although
they should be supported. Until the issue is understood and can be
fixed, declare support for only the x86_64-linux platform.
2022-12-15 13:23:30 +01:00
github-actions[bot]
747e072692
Merge master into staging-next
2022-12-14 06:01:05 +00:00
Justin Bedo
4d394bfb48
R: 4.2.1 -> 4.2.2
2022-12-14 15:52:24 +11:00
Robert Scott
bef7b51a7f
Merge pull request #205581 from mimame/weka/3.9.2-3.9.6
...
weka: 3.9.2 -> 3.9.6
2022-12-14 00:13:33 +00:00
github-actions[bot]
1e7dd98694
Merge master into staging-next
2022-12-14 00:02:18 +00:00
Rick van Schijndel
9833d56c24
treewide: mark packages broken that never built on PLATFORM
...
Done with the help of https://github.com/Mindavi/nixpkgs-mark-broken
Tool is still WIP but this is one of the first results.
I manually audited the results and removed some results that were not valid.
Note that some of these packages maybe should have more constrained platforms set
instead of broken set, but I think not being perfectly correct is better than
just keep trying to build all these things and never succeeding.
Some observations:
- Some darwin builds require XCode tools
- aarch64-linux builds sometimes suffer from using gcc9
- gcc9 is getting older and misses some new libraries/features
- Sometimes tools try to do system detection or expect some explicit settings for
platforms that are not x86_64-linux
2022-12-13 21:40:12 +01:00
Luflosi
06137551e6
boinc: 7.20.2 -> 7.20.5
...
https://github.com/BOINC/boinc/releases/tag/client_release%2F7.20%2F7.20.5
Also simplify the code a bit by using `lib.versions.majorMinor` as suggested by @SuperSandro2000.
2022-12-13 18:50:42 +01:00
Philipp Middendorf
051fa1056d
crystfel: fix symlib hard-coding
2022-12-13 11:56:15 +01:00
Miguel Madrid-Mencía
1f0f9ada86
weka: 3.9.2 -> 3.9.6
2022-12-11 18:37:06 -06:00
github-actions[bot]
99d681c4e7
Merge master into staging-next
2022-12-11 18:01:21 +00:00
Mauricio Collares
99fed31f9d
Merge pull request #205547 from r-ryantm/auto-update/primecount
...
primecount: 7.4 -> 7.6
2022-12-11 12:33:23 -03:00
Shamrock Lee
e23f5f4f92
root: 6.26.8 -> 6.26.10
2022-12-11 18:00:34 +08:00
Shamrock Lee
f2fcf446d0
root: add xrootd support and workaround the xrootd runpath bug
2022-12-11 18:00:32 +08:00
Shamrock Lee
53f8736f10
root: adjust format
2022-12-11 17:45:55 +08:00
Fabian Affolter
ddb2541b8a
primecount: add changelog to meta
2022-12-11 01:14:49 +01:00
Fabian Affolter
6deae326bf
primesieve: add changelog to meta
2022-12-10 23:44:00 +01:00
R. Ryantm
016aaa261d
primesieve: 8.0 -> 11.0
2022-12-10 20:15:07 +00:00
R. Ryantm
d5490032d8
primecount: 7.4 -> 7.6
2022-12-10 20:04:53 +00:00
github-actions[bot]
48b3a17dea
Merge master into staging-next
2022-12-09 12:01:30 +00:00
Vladimír Čunát
9c497bb8d6
Merge branch 'staging-next' into staging
2022-12-09 10:27:46 +01:00
Sandro
89c4ef4384
Merge pull request #204832 from Luflosi/update/yosys
2022-12-09 10:27:31 +01:00
Sandro
d1f210df8a
Merge pull request #199078 from gdinh/add-timeloop
...
timeloop: init at unstable-2022-10-28 and accelergy: init at unstable-2022-05-03
2022-12-09 09:13:02 +01:00
Grace Dinh
8a23ce4e69
timeloop: init at unstable-2022-11-29
2022-12-08 12:41:22 -08:00
Weijia Wang
fa19b16e93
ecopcr: 0.8.0 -> 1.0.1
2022-12-08 04:35:53 +01:00
Artturi
850fb23aa8
Merge pull request #204214 from wegank/wxgtk30-gtk2-drop
...
treewide: drop wxGTK30-gtk2
2022-12-06 23:28:43 +02:00
Sandro
84c17bc98f
Merge pull request #204330 from jvanbruegge/isabelle-fix-components
2022-12-06 20:46:39 +01:00
Jan van Brügge
698c7342b7
isabelle: fix build on MacOS
2022-12-06 18:05:26 +00:00
Luflosi
f48ce9295e
abc-verifier: unstable-2022-09-08 -> unstable-2022-11-09
2022-12-06 18:58:31 +01:00
Fabian Affolter
7d3c53e6d1
snakemake: rename GitPython
2022-12-05 21:53:53 +01:00
Fabian Affolter
49dc2b7042
streamlit: rename GitPython
2022-12-05 21:53:11 +01:00
Martin Weinelt
9256404e6b
Merge remote-tracking branch 'origin/staging-next' into staging
2022-12-05 13:22:34 +01:00
Vincent Laporte
221b44a071
coq: 8.16.0 → 8.16.1
2022-12-05 09:22:59 +01:00
Martin Weinelt
2c56dc4832
Merge remote-tracking branch 'origin/staging-next' into staging
2022-12-04 22:07:03 +01:00
Nikolay Korotkiy
3332040606
Merge pull request #203029 from sikmir/geogebra
...
geogebra: 5-0-723-0 → 5-0-745-0, geogebra6: 6-0-723-0 → 6-0-745-0
2022-12-04 17:31:30 +04:00
Nikolay Korotkiy
88ae5d0825
Merge pull request #202805 from r-ryantm/auto-update/cbmc
...
cbmc: 5.70.0 -> 5.71.0
2022-12-03 23:51:24 +04:00
Jan van Brügge
26c369214e
isabelle: use prebuilt z3
...
Isabelle requires this specific version of z3 which is being removed
from nixpkgs due to requiring python2 for its build. We can work around
this by patching the distributed binary
2022-12-03 18:34:13 +00:00
Jan van Brügge
d5299641bb
isabelle: make withComponents function use finalAttrs
...
Before this change
```
(isabelle.overrideAttrs (
/* whatever */
)).withComponents (/* whatever */)
```
would ignore the `overrideAttrs` and use the normal `isabelle`
derivation instead. This commit fixes this
2022-12-03 16:40:53 +00:00
github-actions[bot]
1ac9e3255b
Merge staging-next into staging
2022-12-03 06:02:18 +00:00
Weijia Wang
eac8b51565
flopoco: init at 4.1.3 ( #200459 )
...
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-12-03 05:26:22 +01:00
John Shaffer
9d8767be46
xcircuit: 3.10.12 -> 3.10.37, maintain
2022-12-02 21:57:29 -06:00
Weijia Wang
07cd65bea2
treewide: drop wxGTK30-gtk2
2022-12-03 03:28:32 +01:00
Martin Weinelt
e3da5a807b
Merge remote-tracking branch 'origin/staging-next' into staging
2022-12-03 01:28:01 +01:00
Sandro
e461e83aa7
Merge pull request #191966 from jvanbruegge/isabelle-2022
2022-12-03 00:45:47 +01:00
Pavol Rusnak
85f5d65b7e
Merge pull request #204149 from wegank/viennarna-bump
...
ViennaRNA: 2.4.18 -> 2.5.1, unbreak on aarch64-darwin
2022-12-03 00:23:09 +01:00
Vincent Laporte
188b935b6d
alt-ergo: fix version string
2022-12-03 00:00:05 +01:00
Weijia Wang
df1810c6e8
ViennaRNA: 2.4.18 -> 2.5.1
2022-12-02 18:20:04 +01:00
R. RyanTM
132e60b840
calc: 2.14.1.0 -> 2.14.1.2
...
Also fixed GitHub source url.
2022-12-02 18:02:05 +08:00
github-actions[bot]
c14692be87
Merge staging-next into staging
2022-11-30 18:01:46 +00:00
Mario Rodas
227de2b3bb
Merge pull request #203387 from wegank/formula-aarch64-linux
...
formula: unbreak on aarch64-linux
2022-11-30 07:02:00 -05:00
github-actions[bot]
3f79042e89
Merge staging-next into staging
2022-11-29 12:02:06 +00:00
Weijia Wang
280b4b8279
root: fix build on aarch64-linux ( #203267 )
2022-11-29 01:41:49 -05:00
Martin Weinelt
df2d130ee0
python3Packages.dataclasses: drop
...
Only required on python36, which was dropped a while ago.
2022-11-29 01:34:58 +01:00
Mauricio Collares
9102f78309
Merge pull request #192525 from r-ryantm/auto-update/pari
...
pari: 2.13.4 -> 2.15.1
2022-11-28 20:58:42 -03:00
Jack Gerrits
c5be637c72
vowpal-wabbit: 9.0.1 -> 9.6.0
...
- flatbuffers removed as a dep as the upstream doesn't support installing with flatbuffer support currently and this is an experimental feature
- BUILD_TESTS workaround removed as upstream now properly understands BUILD_TESTING
- `eigen` is a new dependency in this release
- Removed `USE_LATEST_STD` as it was causing an ICE in clang when building on an m1 macbook and it is not strictly necessary for the package
2022-11-29 00:02:14 +08:00
Mauricio Collares
40fddeb8fc
giac: mark as broken on aarch64-darwin
2022-11-28 09:33:10 -03:00
Weijia Wang
31dae4a6c0
formula: unbreak on aarch64-linux
2022-11-28 02:56:13 +01:00
Sandro
853077236a
Merge pull request #202124 from SuperSandro2000/dbus-passthru-daemon
2022-11-28 01:35:34 +01:00
Mauricio Collares
3b258a60a6
sage: import pari 2.15.1 update patch
2022-11-27 20:39:59 -03:00
R. Ryantm
081289609e
pari: 2.13.4 -> 2.15.1
2022-11-27 20:39:59 -03:00
Robert Scott
d2504ace98
Merge pull request #203249 from aaronjheng/streamlit
...
streamlit: 1.13.0 -> 1.15.0
2022-11-27 23:10:22 +00:00
Mauricio Collares
dad9d4f76e
Merge pull request #203170 from jiegec/pari
...
pari: unbreak on aarch64-darwin
2022-11-27 15:15:19 -03:00
Aaron Jheng
8bed9cc42f
streamlit: 1.13.0 -> 1.15.0
2022-11-27 12:57:33 +00:00
Jiajie Chen
91e59727c0
pari: unbreak on aarch64-darwin
2022-11-27 09:39:27 +08:00
K900
420fd2d25b
graphia: 3.1 -> 3.2
2022-11-26 15:49:07 +03:00
Nikolay Korotkiy
bb92198f4c
geogebra6: 6-0-723-0 → 6-0-745-0
2022-11-26 14:17:44 +03:00
Nikolay Korotkiy
5b4bf09237
geogebra6: fix the meta data to allow autoupdate
...
Resolve #188260
2022-11-26 13:58:19 +03:00
Nikolay Korotkiy
ec635b51d6
geogebra: 5-0-723-0 → 5-0-745-0
2022-11-26 13:39:52 +03:00
Robert Schütz
be1fe08f79
surelog: use latest OpenJDK
...
OpenJDK 11 depends on Python 2.
2022-11-25 20:10:49 -08:00
Sandro
bf8865dc28
Merge pull request #198871 from wegank/aspino-aarch64-darwin
2022-11-25 20:12:58 +01:00
Weijia Wang
c00ddaf144
aspino: remove patchShebangs
2022-11-25 16:48:27 +01:00
Weijia Wang
fc653e9de0
avy: fix build on aarch64-linux
2022-11-25 16:48:03 +01:00
Weijia Wang
ee09ecaca2
glucose: fix build on aarch64-linux
2022-11-25 16:48:03 +01:00
Weijia Wang
017015a82b
aspino: fix build
2022-11-25 16:48:03 +01:00
Bobby Rong
e34bc8cc1a
Merge pull request #198055 from jdupak/master
...
QtRVSim: 0.9.3 -> 0.9.4
2022-11-25 22:50:43 +08:00
Bobby Rong
4315ef82eb
Merge pull request #202657 from 4825764518/master
...
qalculate-qt: update supported platforms
2022-11-25 21:51:45 +08:00
R. Ryantm
d9af397634
cbmc: 5.70.0 -> 5.71.0
2022-11-25 08:37:13 +00:00
Jonas Heinrich
20193b6d86
Merge pull request #202395 from thyol/muscle
...
muscle: 3.8.31 -> 5.1.0
2022-11-24 15:47:12 +01:00
Guillaume Girol
6f9188b26b
Merge pull request #201759 from collares/giac-1.9.0.29
...
giac: 1.9.0-5 -> 1.9.0-29
2022-11-24 14:16:03 +00:00
Jonas Heinrich
57728b51cf
Merge pull request #202404 from thyol/veryfasttree
...
veryfasttree: init at 3.1.1
2022-11-24 15:14:13 +01:00
Sandro
2ca694f473
Merge pull request #198552 from wegank/wxgtk-games
2022-11-24 14:21:25 +01:00
4825764518
9c363bae16
qalculate-qt: update supported platforms
2022-11-24 05:37:05 -05:00
R. Ryantm
471d8bb07a
opensmt: 2.4.2 -> 2.4.3
2022-11-22 20:15:56 +00:00
thyol
cdcb7946ba
veryfasttree: init at 3.1.1
2022-11-22 20:45:45 +01:00
thyol
35d3a6fa79
muscle: add myself to maintainers
2022-11-22 20:19:17 +01:00
thyol
d7c8595f62
muscle: 3.8.31 -> 5.1.0
2022-11-22 20:19:17 +01:00
R. Ryantm
7e88b2bef5
form: 4.2.1 -> 4.3.0
2022-11-22 12:01:40 -05:00
thyol
81d6f1c7dc
sratoolkit: init at 2.11.3
2022-11-21 20:27:28 +01:00
Sandro Jäckel
c7f5becba3
dbus: remove unused daemon passhtru
2022-11-21 20:23:00 +01:00
R. Ryantm
6ba0d20487
igv: 2.14.1 -> 2.15.1
2022-11-20 14:06:29 +08:00
R. Ryantm
862277ac9d
kstars: 3.6.0 -> 3.6.1
2022-11-20 10:52:50 +08:00
Markus Kowalewski
57d39374e2
gromacs: 2022.3 -> 2022.4
2022-11-18 14:37:22 +01:00
Mauricio Collares
339f72586a
giac: 1.9.0-5 -> 1.9.0-29
2022-11-18 09:15:22 -03:00
Pascal Bach
b85c2a060f
Merge pull request #200871 from lorenz/update-dsview
...
dsview: 1.1.2 -> 1.2.1
2022-11-16 21:18:59 +01:00
sternenseemann
a110f08f12
ocamlPackages.extlib: rename from ocaml_extlib
...
This matches the name used in dune and on OPAM.
2022-11-16 14:30:37 +01:00
Grace Dinh
d3153abe7d
accelergy: init at unstable-2022-05-03
2022-11-15 17:06:02 -08:00
Sandro Jäckel
da3200b7b6
Revert "gplates: fix failing build"
...
This reverts commit 8a236e246a
2022-11-16 00:29:02 +01:00
Sergei Trofimovich
e4d99ffc58
Merge pull request #201383 from yurket/d-seams_zhf_fix
...
d-seams: fix failing build
2022-11-15 22:57:02 +00:00
yurket
4e4a021fd7
d-seams: fix failing builds
...
cxxopts failing to build with clang11:
/build/source/src/include/external/cxxopts.hpp:488:42: error: no member named 'numeric_limits' in namespace 'std'
if (u > static_cast<U>(-std::numeric_limits<T>::min()))
Use the patch from upstream, which updates cxxopts 2.2.0 -> 3.0.0
2022-11-15 14:05:05 -08:00
Aaron Jheng
678ccdf716
element: mark as broken on darwin
2022-11-14 02:16:43 +00:00
Robert Scott
ea6d354b84
Merge pull request #201044 from fedeinthemix/update-xyce
...
xyce: 7.4.0 -> 7.6.0
2022-11-13 20:13:29 +00:00
Federico Beffa
d36e0be2ea
xyce: 7.4.0 -> 7.6.0
2022-11-13 16:41:14 +01:00
Mario Rodas
16df31b2cd
Merge pull request #200755 from collares/lean-3.49.0
...
lean: 3.48.0 -> 3.49.0
2022-11-13 09:04:08 -05:00
Robert Schütz
61c207555b
hal-hardware-analyzer: use igraph 0.9
2022-11-12 20:07:20 -08:00
yurket
8a236e246a
gplates: fix failing build
...
Started failing after the commit 11ea0e99b7
2022-11-12 11:33:42 -08:00
Lorenz Brun
c35b5503f4
dsview: 1.1.2 -> 1.2.1
2022-11-12 16:04:11 +01:00
Mauricio Collares
c87af38741
lean: 3.48.0 -> 3.49.0
2022-11-11 17:33:01 -03:00
R. Ryantm
139ba95570
cbmc: 5.69.1 -> 5.70.0
2022-11-11 18:08:36 +08:00
Weijia Wang
699e05b52a
root5: migrate to gsl ( #200455 )
2022-11-10 18:59:19 -05:00
7c6f434c
511bbd4c78
Merge pull request #200059 from r-ryantm/auto-update/clingo
...
clingo: 5.6.1 -> 5.6.2
2022-11-10 10:32:04 +00:00
Shamrock Lee
a664ec27f4
root: add package test test-thisroot
2022-11-10 09:27:35 +08:00
Shamrock Lee
7f91dec5dd
root: wrap the executable and patch thisroot.*
2022-11-10 09:23:52 +08:00
Dmitry Kalinkin
25fd03cf72
Merge pull request #200412 from wegank/root-darwin
...
root: 6.26.06 -> 6.26.08
2022-11-09 18:16:38 -05:00
Weijia Wang
d474e39f7d
root: fix build on aarch64-darwin
2022-11-09 21:03:59 +01:00
Weijia Wang
5d5c6ded1a
root: 6.26.06 -> 6.26.08
2022-11-09 18:19:45 +01:00
Shamrock Lee
0106a68555
root: enable davix and ssl support ( #200096 )
...
This enables CERN ROOT to open file urls with scheme
`davs://` and `https://`.
The inclusion of `openssl` in buildInputs
will increase neither closure size nor rebuild frequency,
since `python3`, which depends on `openssl`, is already a dependency.
2022-11-09 11:31:37 -05:00
Fabian Affolter
95ed815b50
Merge pull request #200234 from r-ryantm/auto-update/delly
...
delly: 1.1.5 -> 1.1.6
2022-11-09 08:00:15 +01:00
Artturi
3e2445be79
Merge pull request #200145 from hzeller/20221107-update-surelog-uhdm-plugin
...
Fix for darwin build.
2022-11-09 02:09:35 +02:00
Weijia Wang
e0e6444e50
boinc: unbreak on aarch64-linux
2022-11-09 00:59:14 +01:00
Henner Zeller
50c509ecf3
surelog: 1.40 -> 1.45
...
Update Surelog (going along with uhdm 1.45). Fix flaky tests
to to parallel execution of ctest by patching in a fix that is
already upstream.
Result zero hydra failures #199919
Also: using flatbuffers from nix environment instead of third_party/
Signed-off-by: Henner Zeller <h.zeller@acm.org>
2022-11-08 12:47:27 -08:00
Henner Zeller
568398e338
uhdm: 0.9.1.40 -> 1.45
...
Update UHDM and also fix for Darwin build.
The gtest version used in the project unconditionally uses
/tmp as temporary directory in Darwin and does not honor the
environment variables introduced in gtest 1.12.
Use that gtest version so that it will work in the Hydra
build environment.
Related: #199919 as this is fixing the Darwin build.
Signed-off-by: Henner Zeller <h.zeller@acm.org>
2022-11-08 12:47:14 -08:00
R. Ryantm
c7ba9b459c
delly: 1.1.5 -> 1.1.6
2022-11-08 18:21:37 +00:00
Fabian Affolter
9ac3253434
Merge pull request #200024 from fabaff/docker-bump
...
python310Packages.docker: 6.0.0 -> 6.0.1
2022-11-08 15:48:02 +01:00
Fabian Affolter
cad704eb95
toil: 5.6.0 -> 5.7.1
2022-11-08 12:17:40 +01:00
Mario Rodas
f84d890770
Merge pull request #199530 from NickCao/stellarium_11
...
stellarium: 1.0 -> 1.1
2022-11-08 03:15:29 -05:00
Justin Bedő
3a90ab68e6
Merge pull request #197631 from jbedo/octopus
...
octopus-caller: backport patch to fix build
2022-11-07 21:26:21 +00:00
Mauricio Collares
fc9eb96278
Merge pull request #198355 from collares/sage-libgap-aarch64
...
sage: fix aarch64 crashes and skip problematic test
2022-11-07 17:53:09 -03:00
R. Ryantm
f77d334af1
clingo: 5.6.1 -> 5.6.2
2022-11-07 17:55:20 +00:00
R. Ryantm
a8ed4be9a6
gmsh: 4.10.5 -> 4.11.0
2022-11-07 11:31:21 +00:00
amesgen
4a3fc076e4
clingcon: 5.0.0 -> 5.2.0 and fix build
2022-11-07 00:41:21 +01:00
Mario Rodas
5b06368259
Merge pull request #199623 from wegank/kicad-wxgtk
...
kicad: migrate to wxGTK32
2022-11-05 16:31:07 -05:00
Nick Cao
e562fc6e05
stellarium: build with qt6
2022-11-05 21:39:24 +08:00
Nick Cao
f2870ff9e2
calcmysky: build with qt6
2022-11-05 21:39:10 +08:00
Nick Cao
74fd5f0cba
stellarium: 1.0 -> 1.1
2022-11-05 21:37:59 +08:00
Nick Cao
b105efc145
calcmysky: 0.1.0 -> 0.2.1
2022-11-05 21:37:59 +08:00
markuskowa
e2cf8ac376
Merge pull request #199331 from markuskowa/fix-arpack
...
arpack: fix ILP64 checks and MPI support
2022-11-05 12:37:35 +01:00
Weijia Wang
0b894f5564
kicad: migrate to wxGTK32
2022-11-05 03:35:27 +01:00
Mauricio Collares
079200691f
sage: patches to fix aarch64 crashes and skip known timeout
2022-11-04 16:09:51 -03:00
Valentin Gagarin
b02d74fb5e
Merge pull request #173225 from matthuszagh/uhdm
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Add systemverilog plugin to yosys
2022-11-04 18:37:13 +01:00
Christian Kögler
759bbe2f57
Merge pull request #190900 from bzizou/seqkit
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seqkit: init at 2.3.1
2022-11-04 16:48:40 +01:00
Sandro
8f679a5327
Merge pull request #194031 from NickCao/stellarium
2022-11-04 15:33:03 +01:00
7c6f434c
58f6230338
Merge pull request #192548 from collares/gap-4.12
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gap: 4.11.1 -> 4.12.1
2022-11-04 08:01:40 +00:00
Bruno Bzeznik
9243a44c9c
seqkit: init at 2.3.1
2022-11-04 08:51:32 +01:00
Markus Kowalewski
8c3d2bab83
calculix: add blas, lapack, arpack ILP64 checks
2022-11-03 12:59:44 +01:00
Markus Kowalewski
b931e2bb82
octopus: add arpack ILP64 check
2022-11-03 12:50:08 +01:00
Weijia Wang
7f0b7f4cf3
fityk: migrate to wxGTK32
2022-11-03 11:49:13 +01:00
markuskowa
c14386f1ed
Merge pull request #199025 from r-ryantm/auto-update/element
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element: 1.0.0 -> 1.0.1
2022-11-02 21:46:19 +01:00
Austin Seipp
3afaf7d263
verilator: enable doCheck = true
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Based on the work from yangm2 in #109493 .
Co-authored-by: yangm2 <yangm2@users.noreply.github.com>
Signed-off-by: Austin Seipp <aseipp@pobox.com>
2022-11-02 07:55:30 -05:00
Austin Seipp
5ceadb26b8
verilator: 4.226 -> 5.002
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Signed-off-by: Austin Seipp <aseipp@pobox.com>
2022-11-02 07:55:30 -05:00
