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e8436f5e23
Commit Graph

149 Commits

Author SHA1 Message Date
Timo Kaufmann
e8436f5e23 sage: 8.9.beta5 -> 8.9.beta6 2019-08-18 21:52:27 +02:00
Timo Kaufmann
ddd3faf08e sage: 8.9.beta4 -> 8.9.beta5 2019-08-07 15:33:15 +02:00
Timo Kaufmann
f6a1fe64eb sage: 8.9.beta3 -> 8.9.beta4 2019-08-02 23:50:45 +02:00
Timo Kaufmann
b884552c35 sage: 8.9.beta2 -> 8.9.beta3 2019-08-02 01:03:33 +02:00
Timo Kaufmann
56bd506e42 sage: 8.9.beta0 -> 8.9.beta2 2019-07-11 19:42:01 +02:00
Timo Kaufmann
924c321e8a sage: 8.8 -> 8.9.beta0 2019-07-02 23:02:36 +02:00
Timo Kaufmann
5b2db39c49 sage: 8.8.rc2 -> 8.8 2019-06-27 22:05:30 +02:00
Timo Kaufmann
e7d4386e0e sage: 8.8.rc1 -> 8.8.rc2 2019-06-27 22:03:00 +02:00
Timo Kaufmann
218fd843a3 sage: 8.8.rc0 -> 8.8.rc1 2019-06-27 22:03:00 +02:00
Timo Kaufmann
409bee28b6 sage: 8.8.beta7 -> 8.8.rc0 2019-06-27 22:03:00 +02:00
Timo Kaufmann
c76e8fa86e sage: 8.8.beta6 -> 8.8.beta7 2019-06-27 22:02:57 +02:00
Timo Kaufmann
9f434d7080 sage: 8.8.beta5 -> 8.8.beta6 2019-06-27 22:01:40 +02:00
Timo Kaufmann
325a5037bf sage: 8.8.beta4 -> 8.8.beta5 2019-06-27 22:01:37 +02:00
Timo Kaufmann
240d4c31d2 sage: 8.8.beta3 -> 8.8.beta4 2019-06-27 21:57:33 +02:00
Timo Kaufmann
608948e3e9 sage: 8.8.beta2 -> 8.8.beta3 2019-06-27 21:57:33 +02:00
Timo Kaufmann
21c1ab6776 sage: 8.7 -> 8.8.beta2 2019-06-27 21:57:27 +02:00
Timo Kaufmann
9955657209 sage: fix online threejs 2019-06-20 12:50:00 +02:00
Timo Kaufmann
2d78d928cd sage: backport threejs r100 compatibility 
https://github.com/NixOS/nixpkgs/issues/62736#issuecomment-503757429
 2019-06-20 12:50:00 +02:00
Timo Kaufmann
6e74109b13
sage: fix threejs integration (#63375) 
Before this it didn't find the correct files. Unfortunately, the
interactive parts of sage are hard to test automatically.
 2019-06-18 11:50:41 +02:00
volth
f3282c8d1e treewide: remove unused variables (#63177) 
* treewide: remove unused variables

* making ofborg happy
 2019-06-16 19:59:05 +00:00
Robin Gloster
6cf583cf2f
Merge pull request #60406 from JohnAZoidberg/remove-isnull 
treewide: Remove usage of isNull
 2019-05-18 09:36:24 +00:00
Timo Kaufmann
3814d7b14a
givaro: 4.0.4 -> 4.1.0, fflas-ffpack: 2.3.2 -> 2.4.0, linbox: 1.5.2 -> 1.6.0 (#61285) 
The three packages are interdependent and need to be updated together,
like the main contributor did for sage:

https://trac.sagemath.org/ticket/24214
 2019-05-11 16:09:07 +02:00
Daniel Schaefer
786f02f7a4 treewide: Remove usage of isNull 
isNull "is deprecated; just write e == null instead" says the Nix manual
 2019-04-29 14:05:50 +02:00
Timo Kaufmann
6dabc28cd0 sage: add compatibility for R 3.6.0 
The random number generator seems to have changed. Because of this, a
trivial test adjustment is needed.
 2019-04-29 13:37:07 +02:00
Timo Kaufmann
af6739fdd7 gap: 4.10.0 -> 4.10.1 2019-04-20 09:54:27 +02:00
Timo Kaufmann
49b8efcb84 sage: 8.6 -> 8.7 
https://groups.google.com/forum/#!topic/sage-release/3m8PV9JkFro
 2019-04-17 22:44:32 +02:00
Timo Kaufmann
e0e5445667 sage: fix another transient sig_on bug 
Caused a test failure on hydra, backporting upstream fix.
 2019-04-17 19:58:07 +02:00
Timo Kaufmann
62c288ec20
python.pkgs.sympy: 1.3 -> 1.4 (#59482) 2019-04-14 17:52:03 +02:00
Timo Kaufmann
ceede33ddf
python.pkgs.cypari2: 2.0.3 -> 2.1.0 (#59085) 2019-04-06 21:46:13 +00:00
Timo Kaufmann
69555825f8
eclib: 20180815 -> 20190226 (#58801) 
Needs a sage patch, see
https://trac.sagemath.org/ticket/27360.
 2019-04-02 15:39:20 +00:00
Timo Kaufmann
5fc5881221
sage: backport bugfix (#57794) 2019-03-17 14:36:01 +00:00
Timo Kaufmann
ce96994032
sage: fix docbuild (#57294) 
The docbuild (or rather its tests) failed because sphinx built some
English parts of the documentation in Russian. The added debian patch
fixes that by isolating docbuilding threads in sphinx using
proper subprocesses.
 2019-03-10 21:42:54 +00:00
Timo Kaufmann
23908a0ee3 sage: downgrade maxima to 5.41 
See discussion at
82254747af.
 2019-03-09 17:23:57 +01:00
Timo Kaufmann
9e3754786b sage: fix strictDeps fallout 
See https://github.com/NixOS/nixpkgs/pull/54182 and
https://github.com/NixOS/nixpkgs/pull/55757.
 2019-03-03 13:25:40 +01:00
Timo Kaufmann
2de81ee78f sage: patch for pip 19 
pip 19 introduced a deprecation warning for python 2.7. Since sage
internally uses pip to query for installed packages, this deprecation
warning will show up at unexpected times. That is ugly and messes with
the testsuite.

Upstream: https://trac.sagemath.org/ticket/27405
 2019-03-03 13:21:22 +01:00
Jörg Thalheim
dadc7eb329
treewide: use runtimeShell instead of stdenv.shell whenever possible 
Whenever we create scripts that are installed to $out, we must use runtimeShell
in order to get the shell that can be executed on the machine we create the
package for. This is relevant for cross-compiling. The only use case for
stdenv.shell are scripts that are executed as part of the build system.
Usages in checkPhase are borderline however to decrease the likelyhood
of people copying the wrong examples, I decided to use runtimeShell as well.
 2019-02-26 14:10:49 +00:00
Timo Kaufmann
9243e85fbc
sage: fix fetchSageDiff (#55783) 
For some reason I changed it to use `cgit`s `rawdiff` instead of `patch`
in the update to sage 8.6. Probably commited that by accident, at least
I can't remember the reason. Also changed the excludes filter, the
leading slash prevented it from working.

As a result, the cypari2 patch changed. Only didn't notice because it
was cached.

Fixes #55780
 2019-02-14 21:48:03 +01:00
Timo Kaufmann
5728028916 sage: add numpy 1.16 compatibility patch 
https://trac.sagemath.org/ticket/27000
 2019-02-11 21:43:56 +01:00
Timo Kaufmann
342333c0ab
sage: add compatibility for sphinx 1.8.3 (#55078) (#55560) 
Since https://github.com/NixOS/nixpkgs/pull/48841 was replaced by
https://github.com/NixOS/nixpkgs/pull/54186, this needs to be done
separately.

(cherry picked from commit 33db01e6d9)
 2019-02-11 13:18:16 +01:00
Vladimír Čunát
d2c4b5777b
sagelib: fix missing pkgs.pkgconfig 
Again: eb3f0aef43 #54306
Apparently the derivation needs both pkgconfigs
(it fails when missing either).
 2019-02-09 10:36:47 +01:00
Robert Schütz
052acfe930 sage: python-openid: move django and twill to checkInputs (#54949) 
A search through the source code
(https://github.com/openid/python-openid/search?q=django and
https://github.com/openid/python-openid/search?q=twill) reveals
that they are only used in examples and tests.
 2019-01-31 10:14:36 +01:00
Timo Kaufmann
d34f44db45
sage: fix transient ecl error (#54285) 
Sometimes the doctests fail because ecl races to create a directory.
This should fix that by making sure each process has its own directory.
 2019-01-18 23:02:03 +01:00
Timo Kaufmann
e379ee67c3 sage: 8.5 -> 8.6 2019-01-17 20:39:02 +01:00
Timo Kaufmann
a8dbc5e313
python.pkgs.cypari2: 1.3.1 -> 2.0.3 (#54093) 
Upstream issues should be fixed now, see https://trac.sagemath.org/ticket/26442.
Sage needs a patch to adapt.
 2019-01-16 22:15:40 +01:00
Timo Kaufmann
22c16ed300 Merge remote-tracking branch 'upstream/master' into sage-8.5 2018-12-29 12:16:02 +01:00
Timo Kaufmann
95909d4fb6 Revert "sage: preload openblasCompat" 
This reverts commit 4900bbee17.

The issue that was supposed to fix is now fixed by lazy-loading rpy2 and
makign sure scipy is loaded before that.
That is not quite as nice, but preloading is now causing its own issues
with openblas 0.3.4:
https://github.com/xianyi/OpenBLAS/issues/1936
 2018-12-28 23:06:05 +01:00
Timo Kaufmann
360eddd3a3 sage: remove outdated patch files 2018-12-28 23:06:05 +01:00
Timo Kaufmann
6f0f06ec89 sage: 8.5.rc1 -> 8.5 2018-12-28 23:06:05 +01:00
Timo Kaufmann
b09967d812 sage: 8.5.rc0 -> 8.5.rc1 2018-12-16 21:33:28 +01:00
Timo Kaufmann
90bc5ce04d sage: 8.5.beta5 -> 8.5.beta6 2018-12-10 19:36:24 +01:00