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Commit Graph

537 Commits

Author SHA1 Message Date
Maximilian Bosch
47e8665595
geogebra: 5-0-355-0 -> 5-0-361-0 2017-05-30 06:35:33 +02:00
Dan Peebles
594829ddfc msieve: update and enable on Darwin 2017-05-26 18:18:39 -04:00
Dan Peebles
1df505fc36 ecm: enable on Darwin 2017-05-26 18:14:31 -04:00
Frederik Rietdijk
99cfab07b9 Merge remote-tracking branch 'upstream/master' into HEAD 2017-05-22 09:21:40 +02:00
Joachim Fasting
874b81b31f
treewide: s,enableParallelBuild(s),enableParallelBuilding,g 2017-05-20 17:16:17 +02:00
Vladimír Čunát
65ede052fa
treewide: fixup packages with RPATH problems 2017-05-16 18:30:58 +02:00
Peter Hoeg
32b57bec77 Merge pull request #25588 from mimadrid/update/weka-3.8.1 
weka: 3.8.0 -> 3.8.1
 2017-05-09 17:39:05 +08:00
mimadrid
bfc3d976f3
weka: 3.8.0 -> 3.8.1 2017-05-07 22:54:09 +02:00
Peter Simons
5e5d16f425 R: import upstream patch to fix broken "R CMD Sweave" command 
The command "R CMD Sweave" always exits with error code "1", even if the
command was successful. This upstream patch remedies this issue.
 2017-05-03 14:20:41 +02:00
Daiderd Jordan
5e3de3938e Merge pull request #25217 from LnL7/darwin-csdp 
csdp: fix darwin build
 2017-04-30 14:33:30 +02:00
Maximilian Bosch
b12f76ddd3 geogebra: 5-0-350-0 -> 5-0-355-0 (#25324) 2017-04-29 14:34:57 +01:00
Peter Hoeg
bf4710fa80 speedcrunch: allow building with qt 5.8 2017-04-28 08:41:58 +08:00
Daiderd Jordan
2bd39ab013
csdp: fix darwin build 
the build sets CC=clang causing it to essentially ignore the cc wrapper
 2017-04-27 20:55:09 +02:00
Peter Simons
d16c38a260 R: update to version 3.4.0 
The new version needs TZ configured to a value other than "UTC" for the test
suite to succeed. Otherwise, an assumption in "reg-tests-1d.R" won't hold that
expects

  d <- as.POSIXlt("2016-12-06"); d$zone <- 1; format(d)

to throw an error about an invalid time zone.
 2017-04-24 15:39:08 +02:00
Maximilian Bosch
1e295260e2
geogebra: 5-0-346-0 -> 5-0-350-0 2017-03-30 21:55:05 +02:00
Robin Gloster
13ab07d95a
maxima-ecl: mark as broken 2017-03-30 16:23:34 +02:00
Robin Gloster
536b782450
libsingular: does not build on i686 2017-03-30 16:23:34 +02:00
Robin Gloster
f87de53883
sage: mark as broken 2017-03-30 12:06:08 +02:00
Vladimír Čunát
96d41e393d
treewide: purge maintainers.urkud 
It's sad, but he's been inactive for the last five years.
Keeping such people in meta.maintainers is counter-productive.
 2017-03-27 19:52:29 +02:00
Maximilian Bosch
9787b2b808
geogebra: 5-0-338-0 -> 5-0-346-0 2017-03-24 22:16:57 +01:00
Peter Hoeg
317734f99c speedcrunch: stick to qt 5.7 as 5.8 is broken 2017-03-25 00:39:30 +08:00
Arseniy Seroka
320a8a5a94 Merge pull request #23842 from volhovM/fix/sage_68_sed 
sage: fix build at 6.8
 2017-03-13 16:51:55 +03:00
Mikhail Volkhov
78c0cecc5f
sage: fix build at 6.8 2017-03-13 10:34:55 +03:00
Maximilian Bosch
2df3b5ca7f geogebra: 5-0-331-0 -> 5-0-338-0 (#23593) 2017-03-12 21:37:10 +00:00
Peter Simons
c5563b48ba R: set TZDIR properly to fix test suite 2017-03-07 14:56:46 +01:00
Peter Simons
6b3eec627e R: include output of sessionInfo() in the "make check" log 
The R developers would like that information to be included in bug
reports.
 2017-03-07 14:56:46 +01:00
Peter Simons
fac139e723 R: update to version 3.3.3 2017-03-07 14:56:46 +01:00
Thomas Tuegel
28cb067600
fricas: 1.2.2 -> 1.3.1 2017-03-02 19:39:55 -06:00
Domen Kožar
4ccb553b70 Merge pull request #22817 from jbedo/r 
R: 3.2.4 -> 3.3.2
 2017-02-27 14:02:13 +01:00
Justin Bedo
4bb8727284
R: 3.2.4 -> 3.3.2 2017-02-24 15:22:12 +11:00
Maximilian Bosch
10a453c61b
geogebra: add ma27 as maintainer 2017-02-19 16:51:01 +01:00
Maximilian Bosch
5d62724e27
geogebra: 5-0-328-0 -> 5-0-331-0 2017-02-19 16:44:49 +01:00
Maximilian Bosch
d95868e980
geogebra: 5-0-320-0 -> 5-0-328-0 2017-02-14 17:43:58 +01:00
Joachim F
2b961075ae Merge pull request #22231 from Ma27/hotfix/update-geogebra 
geogebra: 5.0.271.0 -> 5-0-320-0
 2017-02-03 01:13:07 +01:00
Peter Hoeg
58a5d0783e speedcrunch: 0.11 -> 0.12.0 
Also:
  - build against qt5 instead of qt4
 2017-02-02 09:13:54 +08:00
Maximilian Bosch
eda5bca00a geogebra: 5.0.271.0 -> 5-0-320-0 2017-01-28 17:33:20 +01:00
Michael Raskin
7c5784d1f0 maxima: 5.38.1 -> 5.39.0 2017-01-02 21:53:21 +01:00
Michael Raskin
3a98749bd1 pari: 2.9.0 -> 2.9.1 2016-12-08 16:15:18 +01:00
Michael Raskin
fcc5a4d3b8 Merge pull request #20672 from AndersonTorres/pari 
pari/gp: 2.7.6 -> 2.9.0
 2016-11-26 13:34:15 +00:00
Ole Krüger
a31c37c759 [mathematica] 10.0.2 -> 11.0.1 2016-11-25 12:13:41 +01:00
AndersonTorres
d395439a10 pari/gp: 2.7.6 -> 2.9.0 
Adding gp2c compiler, too.
 2016-11-24 22:44:56 -02:00
Ertugrul Söylemez
9c8f6fb4fb pari-unstable: 2.8.0 -> 2.8.1, "alpha" -> "unstable". 2016-10-27 14:48:03 +02:00
Michael Raskin
f9f23084d9 pari_alpha: fix source link 2016-10-27 12:17:16 +02:00
Michael Raskin
28aa92de64 maxima: support building with ECL; optionally support building maxima.fas when building with ECL 2016-10-26 11:06:41 +02:00
Michael Raskin
36804c75e4 singular: Wrap executables instead of symlinking 
This way config scripts can fidn out their own location
 2016-10-26 11:06:40 +02:00
Michael Raskin
2bed05d8e1 singular: add an option to install as libsingular 2016-10-26 11:06:40 +02:00
Michael Raskin
8e9ad9bfdc pari_alpha: use perl to generate function descriptions 2016-10-26 11:06:40 +02:00
Michael Raskin
5af1b7ad02 singular: 3-1-2 -> 3-1-7 2016-10-26 11:06:39 +02:00
Michael Raskin
93bea1ecb0 R: 3.2.3 -> 3.2.4 2016-10-26 11:06:37 +02:00
Michael Raskin
5f418b75d6 nauty: init at 26r7 2016-10-26 11:06:36 +02:00
Michael Raskin
a67a50895c gfan: init at 0.5 2016-10-26 11:06:36 +02:00
Michael Raskin
71f659d86d pari_alpha: init at 2.8.0.alpha: planning to use for Sage 2016-10-26 11:06:34 +02:00
Michael Raskin
411d5742ca symmetrica: init at 2.0 2016-10-26 11:06:33 +02:00
Michael Raskin
c450d7b0a8 ratpoints: init at 2.1.3 2016-10-26 11:06:33 +02:00
Kirill Boltaev
3e646865f4 treewide: use ocaml.version (#19192) 2016-10-05 09:32:30 +02:00
Kirill Boltaev
2bc87d48f1 scilab: mark as broken 2016-09-26 02:36:49 +03:00
Kirill Boltaev
06ecea00e5 glsurf: mark as broken 2016-09-26 02:36:49 +03:00
Vincent Laporte
c78c2b98c4 ecm: set meta.platforms to linux only 2016-09-21 19:14:11 +02:00
Ram Kromberg
a729d6ee55 calc: remove redundant groff dependency 2016-09-19 01:37:45 +03:00
Nikolay Amiantov
4748709926 Merge commit 'refs/pull/18498/head' of git://github.com/NixOS/nixpkgs 2016-09-13 12:51:34 +03:00
Kirill Boltaev
bccd75094f treewide: explicitly specify gtk and related package versions 2016-09-12 18:26:06 +03:00
Chris Martin
e417a63e61 scilab: md5->sha256 2016-09-10 13:50:10 -04:00
Joachim F
3d852770db Merge pull request #18164 from moyamo/geogebra 
geogebra: 5.0.265.0 -> 5.0.271.0
 2016-09-03 17:06:54 +02:00
Tuomas Tynkkynen
3364230d56 Disable bunch of non-compiling packages on Darwin 
These ones have a "Last successful build" timestamp in the 2014s or
2015s. Presumably no one will notice if we now stop building them.

softether_4_18              2015-09-20  http://hydra.nixos.org/build/39418483
lensfun                     2014-09-30  http://hydra.nixos.org/build/39394104
net_snmp                    2015-09-20  http://hydra.nixos.org/build/39410553
djview                      2015-08-11  http://hydra.nixos.org/build/39413233
libmusicbrainz2             2015-09-20  http://hydra.nixos.org/build/39410106
fox_1_6                     2014-05-07  http://hydra.nixos.org/build/39410858
libofx                      2015-09-24  http://hydra.nixos.org/build/39423507
yacas                       2014-09-30  http://hydra.nixos.org/build/39393150
iomelt                      2014-09-30  http://hydra.nixos.org/build/39408486
softether                   2015-09-20  http://hydra.nixos.org/build/39425800
mp4v2                       2014-09-30  http://hydra.nixos.org/build/39421899
virtuoso7                   2014-09-21  http://hydra.nixos.org/build/39415206
man_db                      2015-04-23  http://hydra.nixos.org/build/39404236
libdiscid                   2014-09-30  http://hydra.nixos.org/build/39412202
zabbix22.agent              2014-09-21  http://hydra.nixos.org/build/39412149
vidalia                     2015-08-06  http://hydra.nixos.org/build/39411500
libmtp                      2015-09-20  http://hydra.nixos.org/build/39419199
wxGTK29                     2015-09-20  http://hydra.nixos.org/build/39415296
ncmpcpp                     2015-11-06  http://hydra.nixos.org/build/39404455
libtorrent                  2014-09-21  http://hydra.nixos.org/build/39394646
shishi                      2014-03-21  http://hydra.nixos.org/build/39418874
ocaml_3_12_1                2014-09-30  http://hydra.nixos.org/build/39392996
djview4                     2015-08-11  http://hydra.nixos.org/build/39427799
vimNox                      2014-05-23  http://hydra.nixos.org/build/39397012
ttfautohint                 2015-08-06  http://hydra.nixos.org/build/39398330
libraw                      2015-09-24  http://hydra.nixos.org/build/39402271
wxGTK30                     2015-09-20  http://hydra.nixos.org/build/39401871
sbcl_1_2_5                  2015-09-20  http://hydra.nixos.org/build/39426091
prover9                     2014-09-30  http://hydra.nixos.org/build/39406476
rcs                         2015-08-25  http://hydra.nixos.org/build/39392037
gpac                        2015-09-24  http://hydra.nixos.org/build/39399470
virtuoso6                   2014-09-30  http://hydra.nixos.org/build/39398651
xlslib                      2015-09-24  http://hydra.nixos.org/build/39410387
ucommon                     2015-03-27  http://hydra.nixos.org/build/39414040
commoncpp2                  2014-09-30  http://hydra.nixos.org/build/39420117
virtuoso                    2014-09-21  http://hydra.nixos.org/build/39399978
miniHttpd                   2014-09-30  http://hydra.nixos.org/build/39392925
mpack                       2014-09-26  http://hydra.nixos.org/build/39399535
nbd                         2014-09-26  http://hydra.nixos.org/build/39401367
newsbeuter-dev              2014-07-29  http://hydra.nixos.org/build/39406259
gimp_2_8                    2015-09-20  http://hydra.nixos.org/build/39436271
gimp                        2015-09-20  http://hydra.nixos.org/build/39435976
zabbix20.agent              2014-09-30  http://hydra.nixos.org/build/39393242
gst_all_1.gst-plugins-good  2015-09-20  http://hydra.nixos.org/build/39408506
ocaml_4_00_1                2014-09-30  http://hydra.nixos.org/build/39399526
inadyn                      2014-09-30  http://hydra.nixos.org/build/39426389
gst_all_1.gst-plugins-bad   2015-09-20  http://hydra.nixos.org/build/39392970
zabbix.agent                2014-09-30  http://hydra.nixos.org/build/39421412
cmake-2_8                   2015-09-24  http://hydra.nixos.org/build/39399443
liblastfm                   2015-08-06  http://hydra.nixos.org/build/39421812
newsbeuter                  2014-07-29  http://hydra.nixos.org/build/39396605
sdcv                        2014-09-26  http://hydra.nixos.org/build/39412928
 2016-09-01 20:39:33 +03:00
Mohammed Yaseen Mowzer
921682a4d5 geogebra: 5.0.265.0 -> 5.0.271.0 2016-08-31 18:31:56 +02:00
Tuomas Tynkkynen
d3dc3d4130 Merge remote-tracking branch 'dezgeg/shuffle-outputs' into staging 
https://github.com/NixOS/nixpkgs/pull/14766
 2016-08-30 12:43:37 +03:00
Tuomas Tynkkynen
c3bcb4e1ce treewide: Use explicit 'dev' references to glibc 2016-08-30 03:11:09 +03:00
Vincent Laporte
17af87323d maxima: 5.36.1 -> 5.38.1 2016-08-29 15:52:05 +02:00
Robin Gloster
005a147f92
sage: fix build 
closes #17842
 2016-08-29 12:46:51 +00:00
obadz
57ddc155fc Merge branch 'master' into staging 
Conflicts:
	pkgs/games/scummvm/default.nix
 2016-08-28 12:20:59 +01:00
Gabriel Ebner
497b3cabcc libqalculate, qalculate-gtk: 0.9.8 -> 0.9.9 2016-08-28 10:40:33 +02:00
obadz
3de6e5be50 Merge branch 'master' into staging 
Conflicts:
      pkgs/applications/misc/navit/default.nix
      pkgs/applications/networking/mailreaders/alpine/default.nix
      pkgs/applications/networking/mailreaders/realpine/default.nix
      pkgs/development/compilers/ghc/head.nix
      pkgs/development/libraries/openssl/default.nix
      pkgs/games/liquidwar/default.nix
      pkgs/games/spring/springlobby.nix
      pkgs/os-specific/linux/kernel/perf.nix
      pkgs/servers/sip/freeswitch/default.nix
      pkgs/tools/archivers/cromfs/default.nix
      pkgs/tools/graphics/plotutils/default.nix
 2016-08-27 23:54:54 +01:00
Robin Gloster
13d7e83bf1 perseus: use default gcc 2016-08-24 22:41:41 +00:00
Franz Pletz
bd4490e277 Merge branch 'master' into hardened-stdenv 2016-08-13 16:59:55 +02:00
Luca Bruno
27f294f38d Merge pull request #17589 from cmfwyp/sagemath 
sagemath: update mirrors, fix TeX Live dependency
 2016-08-12 21:58:41 +01:00
Robin Gloster
b7787d932e Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-12 09:46:53 +00:00
Robin Gloster
40d217b90e Merge pull request #17657 from matthewbauer/darwin-misc 
Darwin misc. fixes
 2016-08-11 16:41:34 +00:00
Michael Raskin
da4b7afea8 pari: 2.7.5 -> 2.7.6 2016-08-11 17:57:35 +02:00
Matthew Bauer
b3cb07e130 lie: only build on linux 
Darwin build fails from conflicts in libSystem:

In file included from altdom.c:1:
In file included from /private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:34:
In file included from /nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/string.h:176:
/nix/store/9ll4m9yx854hr64fn1w9ra3qimm3pzdk-Libsystem-osx-10.9.5/include/strings.h:73:7: error: redefinition of 'index' as different kind of symbol
char    *index(const char *, int) __POSIX_C_DEPRECATED(200112L);
         ^
/private/var/folders/7t/4vz31njj37b8y_bg6z3t7tk00000gn/T/nix-build-LiE-2.2.2.drv-0/LiE/lie.h:6:14: note: previous definition is here
typedef long index;
             ^
1 error generated.
 2016-08-10 21:06:22 -05:00
Matthew Bauer
d4b1289592 lie: LiE -> lie 
Attributes need to be lowercase, see https://nixos.org/nixpkgs/manual/#sec-package-naming.
 2016-08-10 21:04:16 -05:00
obadz
8df7571bbc geogebra: don't build on hydra since derivation just unpacks jars 2016-08-10 14:35:14 +01:00
Mohammed Yaseen Mowzer
04f0cb86d0 geogebra: init at 5.0.265.0 
Closes #17400
 2016-08-10 14:32:09 +01:00
cmfwyp
179d992427
sage: fix TeX Live input 
The Sage derivation had texLive, the old TeX Live packaging which
is now marked as broken, as a build input. This replaces it by the
current TeX Live packaging.

However, the build remains broken. One of the problems can be
solved by patching the hashbangs at the beginning of build scripts,
but the build still gets stuck while building ncurses.
 2016-08-07 23:18:47 -04:00
Tuomas Tynkkynen
fdde95e096 msieve: Broken on i686 
http://hydra.nixos.org/build/38236222
 2016-08-06 17:06:45 +03:00
Erik Rybakken
37aff96daf ripser: init at 1.0 (#17481) 2016-08-04 10:21:48 +02:00
Robin Gloster
1b979d8384 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-08-03 13:34:44 +00:00
Tuomas Tynkkynen
21f17d69f6 treewide: Add lots of meta.platforms 
Build-tested on x86_64 Linux & Mac.
 2016-08-02 21:42:43 +03:00
Tuomas Tynkkynen
1bf5ded193 treewide: Lots of meta.hydraPlatforms -> meta.platforms 
In all of these files, there is no meta.platforms but only
meta.hydraPlatforms, which doesn't seem to have any purpose except being
inconsistent.
 2016-08-02 21:17:44 +03:00
Robin Gloster
63c7b4f9a7 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-31 20:51:34 +00:00
Bryan Gardiner
ed071594e5
scilab-bin: init at 5.5.2 
A built-from-source Scilab 5 package looks to be a lot more work, and some
dependencies are missing from Nixpkgs, but the binary version with bundled
dependencies works.
 2016-07-27 21:30:12 -07:00
Robin Gloster
203846b9de Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-07-19 10:37:02 +00:00
Ben Darwin
a896233396 jags: 3.4.0 -> 4.1.0 (#16804) 
* jags: 3.4.0 -> 4.1.0
* unbreak rjags and dependent packages
 2016-07-18 13:11:18 +02:00
Konstantin Heil
c0656fe0c1 LiE: include forgotten file INFO.a by installation 2016-07-14 14:18:57 +02:00
Franz Pletz
26dd9acba5 Merge remote-tracking branch 'origin/master' into hardened-stdenv 2016-07-09 13:21:28 +02:00
Konstantin Heil
b92c429799 LiE: init at 2.2.2 2016-06-30 21:04:41 +02:00
Bjørn Forsman
bd01fad0ed Captialize meta.description of all packages 
In line with the Nixpkgs manual.

A mechanical change, done with this command:

  find pkgs -name "*.nix" | \
      while read f; do \
          sed -e 's/description\s*=\s*"\([a-z]\)/description = "\u\1/' -i "$f"; \
      done

I manually skipped some:

* Descriptions starting with an abbreviation, a user name or package name
* Frequently generated expressions (haskell-packages.nix)
 2016-06-20 13:55:52 +02:00
Gabriel Ebner
727716cd82 speedcrunch: 0.11-alpha -> 0.11 2016-06-19 18:45:04 +02:00
Gabriel Ebner
e5b3b685f4 libqalculate, qalculate-gtk: 0.9.7 -> 0.9.8 2016-06-19 17:33:45 +02:00
mimadrid
aa8eba9d95
weka: 3.6.12 -> 3.8.0 
Closes #16055
 2016-06-16 15:47:48 +02:00
Robin Gloster
8031cba2ab Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-06-10 09:27:04 +00:00
Christopher Lübbemeier
ac4903284c gmsh: init at 2.12.0 2016-06-09 18:54:26 +02:00
Joachim Fasting
e65698db0b Merge pull request #15939 from ChrisJefferson/fix-gap 
gap : 4.4.12 -> 4.8.3
 2016-06-04 01:14:09 +02:00
Chris Jefferson
75f793bbb2 gap : 4.4.12 -> 4.8.3 2016-06-03 19:01:12 +01:00
Tuomas Tynkkynen
bac26e08db Fix lots of fetchgit hashes (fallout from #15469) 2016-06-03 17:17:08 +03:00
Robin Gloster
2d382f3d98 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-05-30 19:39:34 +00:00
Tuomas Tynkkynen
8d473f107c treewide: Make explicit that 'dev' output of readline is used 2016-05-19 10:03:35 +02:00
Tuomas Tynkkynen
47c45e2041 treewide: Make explicit that 'dev' output of gmp is used 2016-05-19 10:00:36 +02:00
Franz Pletz
f8d481754c
Merge remote-tracking branch 'origin/master' into hardened-stdenv 2016-05-18 17:10:02 +02:00
Peter Simons
8e462995ba Bring my stdenv.lib.maintainers user name in line with my github nick. 2016-05-16 22:49:55 +02:00
Vladimír Čunát
1dc36904d8 Merge #14920: windows improvements, mainly mingw 2016-05-05 08:30:19 +02:00
taku0
f2bab58b3e lp_solve: change source URL to mirror 2016-05-04 22:17:56 +09:00
taku0
3fa49d5ac4 lp_solve: updated description 2016-05-04 22:03:22 +09:00
taku0
725c85c720 lp_solve: fixed build error due to defining isnan 2016-05-04 19:58:05 +09:00
Robin Gloster
c92bca56f8 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-05-02 22:58:02 +00:00
Nikolay Amiantov
ab0a0c004e makeSearchPathOutputs: refactor to makeSearchPathOutput 2016-04-25 13:24:39 +03:00
Vincent Laporte
71e0ce571b csdp: fix build on Darwin 
When the `INSTALL` file is present, `make` claims that the `install`
target is up-to-date.
 2016-04-22 11:53:43 +02:00
Robin Gloster
d020caa5b2 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-04-18 13:49:22 +00:00
Nikolay Amiantov
8b7ebaffeb replace makeSearchPath tree-wise to take care of possible multiple outputs 2016-04-13 22:09:41 +03:00
Robin Gloster
025cedc606 singular.i686-linux: turn off stackprotector hardening 2016-04-03 12:25:05 +00:00
Vladimír Čunát
ab15a62c68 Merge branch 'master' into closure-size 
Beware that stdenv doesn't build. It seems something more will be needed
than just resolution of merge conflicts.
 2016-04-01 10:06:01 +02:00
Robin Gloster
f60c9df0ba Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-03-28 15:16:29 +00:00
Joachim Fasting
649c2cd027 lp_solve: mark as broken 
See https://hydra.nixos.org/build/32393768/log/raw
 2016-03-19 12:46:22 +01:00
Arseniy Seroka
1fb354d1ab Merge pull request #14008 from bzizou/scotch 
scotch: init at 6.0.4
 2016-03-18 22:50:20 +03:00
Bruno Bzeznik Bruno.Bzeznik@imag.fr
75af59f8eb scotch: init at 6.0.4 2016-03-18 10:54:41 +01:00
Vladimír Čunát
09af15654f Merge master into closure-size 
The kde-5 stuff still didn't merge well.
I hand-fixed what I saw, but there may be more problems.
 2016-03-08 09:58:19 +01:00
Franz Pletz
aff1f4ab94 Use general hardening flag toggle lists 
The following parameters are now available:

  * hardeningDisable
    To disable specific hardening flags
  * hardeningEnable
    To enable specific hardening flags

Only the cc-wrapper supports this right now, but these may be reused by
other wrappers, builders or setup hooks.

cc-wrapper supports the following flags:

  * fortify
  * stackprotector
  * pie (disabled by default)
  * pic
  * strictoverflow
  * format
  * relro
  * bindnow
 2016-03-05 18:55:26 +01:00
Robin Gloster
4f0608abdb perseus: disable stackprotector hardening 2016-02-29 12:51:28 +00:00
Robin Gloster
3b4765c9e5 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-02-28 16:32:57 +00:00
zimbatm
17348dc094 Remove all dots at end of descriptions 
Specially crafted for @JagaJaga

    find pkgs -name "*.nix" -exec \
      sed -e 's|\(description.*\)\.";|\1";|g' -i {} \;
 2016-02-27 17:30:29 +00:00
Robin Gloster
3477e662e6 Merge remote-tracking branch 'upstream/master' into hardened-stdenv 2016-02-27 00:08:08 +00:00
tg(x)
1fb998f6c6 calc: init at 2.12.5.3 2016-02-24 22:47:55 +01:00
Vladimír Čunát
d039c87984 Merge branch 'master' into closure-size 2016-02-14 08:33:51 +01:00
Robin Gloster
c572cc5159 qalculate-gtk: turn off format hardening 2016-02-12 16:16:52 +00:00
Robin Gloster
0afc644cfd cbc: turn off format hardening 2016-02-09 01:35:33 +00:00
Robin Gloster
5808bfb977 yacas: no format hardening 2016-02-07 22:51:21 +00:00
Robin Gloster
8c91610cb2 content: remove 
Doesn't build and have been abandoned for years
 2016-01-30 20:31:05 +00:00
Vladimír Čunát
716aac2519 Merge branch 'staging' into closure-size 2016-01-19 09:55:31 +01:00
Mathieu Boespflug
545444cd19 R: add a new enableStrictBarrier package option. 
This option compiles R with --enable-strict-barrier. Doing so is
enables extra memory diagnostics in R that very useful for debugging
memory leak or memory protections issues in extensions to R written in
C, or for any apps embedding R (e.g. Haskell aps embedding R via
HaskellR).
 2016-01-17 11:09:05 +01:00
Vladimír Čunát
4858f3307e R: fix build after splitting gfortran.lib 
The extra flag was causing static libraries to be found (and used)
before dynamic ones. /cc #12085
 2016-01-12 23:57:48 +01:00
Asko Soukka
a225a650bf R: fix Darwin build 
Merged manually from https://github.com/NixOS/nixpkgs/pull/10623.
 2016-01-06 22:20:40 +01:00
Michael Raskin
51f8932c8e pari (PARI/GP): 2.7.4 -> 2.7.5 2016-01-01 12:30:17 +03:00
Michel Kuhlmann
cebbb18e9e R: 3.2.2 -> 3.2.3 2015-12-11 11:36:30 +01:00
Aristid Breitkreuz
158e4ffd9c mathematica package patchPhase does not like set -e 2015-11-30 21:08:30 +01:00
Nikolay Amiantov
5ee5b5ba82 R: add curl for https support 2015-11-25 11:39:28 +01:00
Joachim Fasting
6d4ff90207 gap: reimplement using mkDerivation 2015-11-24 14:45:15 +01:00
Joachim Fasting
022bbe1c0c singular: reimplement using mkDerivation 2015-11-24 14:45:15 +01:00
Karn Kallio
87b75c33ce R: advance to version 3.2.2. 
A test failing without recommended packages has been patched.
 2015-10-02 22:15:14 +02:00
Peter Simons
ccd3e52b60 Merge pull request #9917 from FlorentBecker/sage 
Update sage to 6.8
 2015-09-30 17:28:36 +02:00
Vladimír Čunát
76ef7a93e3 Merge: xlibs and x11 attribute cleanup 
Frequently using multiple *almost* identical attributes is bad.
 2015-09-23 10:42:34 +02:00
Florent Becker
b860b106c5 sage: 6.1.1 -> 6.8 2015-09-22 09:01:33 +00:00
Erik Rybakken
64c1a9a2e2 perseus: init at 4-beta 2015-09-19 00:56:24 +02:00
William A. Kennington III
773b4deb7c Merge commit 'a6f6c0e' into master.upstream 
This is a partial merge of staging where we have up to date binaries for
all packages.
 2015-09-15 12:16:49 -07:00
Vladimír Čunát
88c9f8b574 xlibs: replace occurrences by xorg 
This seems to have been confusing people, using both xlibs and xorg, etc.
- Avoided renaming local (and different) xlibs binding in gcc*.
- Fixed cases where both xorg and xlibs were used.
Hopefully everything still works as before.
 2015-09-15 12:54:34 +02:00
Vladimír Čunát
21e3ff658a x11: replace its usage by xlibsWrapper directly 
Scilab note: the parameters already had pointed to nonexistent dirs
before this set of refactoring. But that config wasn't even used by
default.
 2015-09-15 12:08:24 +02:00
Mathnerd314
eb7404d97a all-packages: Use callPackage where possible 2015-09-14 22:27:19 -06:00
Russell O'Connor
772ec9cae3 csdp: init at 6.1.1 2015-09-10 11:50:18 -04:00
Vladimír Čunát
8f33b8cc93 mass rewrite of find parameters to cross-platform style 
Fixes #9044, close #9667. Thanks to @taku0 for suggesting this solution.
Now we have no modes starting with `/` or `+`.

Rewrite the `-perm` parameters of find:
 - completely safe: rewrite `/0100` and `+100` to `-0100`,
 - slightly semantics-changing: rewrite `+111` to `-0100`.
I cross-verified the `find` manual pages for Linux, Darwin, FreeBSD.
 2015-09-06 10:26:30 +02:00
Eelco Dolstra
8fc039188e Mark some packages with undownloadable source as broken 2015-09-01 12:00:04 +02:00
Gabriel Ebner
6b42cd852a qalculate-gtk: init at 0.9.7 2015-08-31 19:20:29 +02:00
Eelco Dolstra
f423ba3863 cbc: Enable on Darwin 2015-08-19 11:53:10 +02:00
Eelco Dolstra
80c137c7a2 Add cbc, a mixed ILP solver 2015-08-12 18:39:28 +02:00
Arseniy Seroka
e9b5deb973 Merge pull request #8964 from vbgl/ecm 
ecm: 6.2.3 -> 6.4.4
 2015-07-26 20:09:10 +03:00
Sergey Mironov
dcdd7a37f6 lp_solve: add the expression 2015-07-23 20:42:35 +02:00
Vincent Laporte
08750f988a ecm: 6.2.3 -> 6.4.4 2015-07-23 19:22:03 +02:00
William Casarin
8ead9cf0c5 caffe: init at rev 77d66dfc 
Initial version of the Caffe deep learning framework from Berkeley
 2015-07-08 10:07:10 -07:00
Michael Raskin
d7dae65b5c pari: update 2.7.3 -> 2.7.4 2015-07-05 00:32:53 +03:00
Vincent Laporte
5beebaca58 fix glsurf 2015-06-25 08:55:29 +02:00
Michel Kuhlmann
46d46fd05a R: update to 3.2.1 2015-06-18 14:00:29 +02:00
Thomas Tuegel
4fb98dd6a7 jags: build with openblas 2015-06-12 07:56:04 -05:00
Thomas Tuegel
e729a88474 R: build with openblas 
Fixes #6393.
 2015-06-04 17:42:04 -05:00
Tobias Geerinckx-Rice
158e1cfdd0 Don't use "with licenses;" for single licences 
And don't use square brackets on such lines.
 2015-05-28 19:20:29 +02:00
Tobias Geerinckx-Rice
b2d7f4b1ba Use common licence attributes from lib/licenses.nix 
Many (less easily automatically converted) old-style strings
remain.

Where there was any possible ambiguity about the exact version or
variant intended, nothing was changed. IANAL, nor a search robot.

Use `with stdenv.lib` wherever it makes sense.
 2015-05-27 22:00:06 +02:00
Peter Simons
c1e62e9e8b maxima: update to version 5.36.1 2015-05-13 12:17:16 +02:00
Peter Simons
645b1cea6e wxmaxima: update to 15.04.0 2015-05-13 12:17:01 +02:00
Peter Simons
324719a5a6 Drop obsolete pre-NG Haskell builds. 2015-05-05 21:44:47 +02:00
Peter Simons
f82a287c20 R: update to 3.2.0 2015-04-17 20:02:46 +02:00
Aristid Breitkreuz
a7e0cb38c2 update Mathematica to 10.0.2 2015-04-09 21:53:51 +02:00
Siarhei Zirukin
f4cd5a68f7 pcalc: 20120812 -> 20141224 2015-03-24 18:27:42 +01:00
Peter Simons
3f7de179f5 R: update to version 3.1.3 2015-03-09 16:37:05 +01:00
Michael Raskin
0394ce7627 Update pari 2015-03-09 01:03:00 +03:00
Lluís Batlle i Rossell
569a02b725 Updating weka to 3.6.12. 
(cherry picked from commit cd417206f9)
 2015-02-13 16:22:39 +01:00
Shea Levy
c45372f038 Merge commit 'cfb29ab882323d379aba20a95020c7c24f883eae' 
Partial staging merge, including cc-wrapper fixes

Conflicts:
	pkgs/applications/audio/spotify/default.nix
	pkgs/build-support/cc-wrapper/default.nix
	pkgs/development/compilers/cryptol/1.8.x.nix
 2015-02-02 21:14:28 -05:00
Peter Simons
96aa27c772 pspp: update from 0.8.2 to 0.8.3 2015-01-27 14:04:54 +01:00
Eric Seidel
f272730399 rename <gcc-frontend>.gcc to <gcc-frontend>.cc 2015-01-14 20:59:10 -08:00
Eric Seidel
88eae46455 rename occurrences of gcc.gcc to gcc.cc 2015-01-14 20:47:49 -08:00
John Wiegley
28b6fb61e6 Change occurrences of gcc to the more general cc 
This is done for the sake of Yosemite, which does not have gcc, and yet
this change is also compatible with Linux.
 2014-12-26 11:06:21 -06:00
Peter Simons
a9d779aa5d wxmaxima: update to version 14.12.1 2014-12-22 11:20:59 +01:00
Peter Simons
0dd52aba89 maxima: update to version 5.35.1 2014-12-22 11:20:58 +01:00
Peter Simons
67ddc8f4b9 R: add meta.platforms attribute 2014-12-03 16:28:28 +01:00
Eelco Dolstra
0518ccf5af Merge remote-tracking branch 'origin/master' into staging 
Conflicts:
	pkgs/stdenv/generic/default.nix
 2014-11-06 10:16:39 +01:00
Vincent Laporte
6e8a9b8145 wxmaxima: update from 13.04.2 to 14.09.0 2014-11-06 01:41:02 +00:00
Vladimír Čunát
52404a868d Merge recent master into staging 
Nixpkgs Hydra: ?compare=1157272

TODO: port e22889064f

Conflicts:
	nixos/tests/gnome3_10.nix (auto-solved)
	pkgs/applications/video/aegisub/default.nix
	pkgs/development/libraries/boost/1.55.nix
 2014-11-05 15:00:44 +01:00
Joachim Fasting
71a443c1b2 Add mirrors for sage 2014-11-03 23:04:44 +01:00
Peter Simons
109f19d749 Merge pull request #4788 from joachifm/sage 
sage fixes
 2014-11-03 11:16:56 +01:00
Joachim Fasting
6f7822ddda sage: fix download url for version 6.1.1 2014-11-02 20:55:08 +01:00
Joachim Fasting
82ec13eaa3 sage: fix meta information 
Correct homagepage, description, and license.
 2014-11-02 20:55:02 +01:00
Peter Simons
a9c53037fa Merge remote-tracking branch 'origin/master' into staging. 2014-11-02 16:15:53 +01:00
Peter Simons
ead6bc4a57 R: run the test suite only when recommended packages are built 2014-11-01 21:08:05 +01:00
Peter Simons
12e26d47b7 R: update to version R-3.1.2 2014-11-01 13:43:48 +01:00
Eelco Dolstra
09dc132e04 Merge remote-tracking branch 'origin/master' into staging 
Conflicts:
	pkgs/development/libraries/poppler/default.nix
 2014-10-16 15:16:50 +02:00
Vincent Laporte
9d5be8a757 maxima: update from 5.33.0 to 5.34.1 2014-10-10 21:55:16 +01:00
Eelco Dolstra
a85dcf4a00 Merge remote-tracking branch 'origin/master' into staging 
Conflicts:
	pkgs/development/libraries/libav/default.nix
	pkgs/shells/bash/bash-4.2-patches.nix
	pkgs/stdenv/generic/default.nix
 2014-10-07 00:09:37 +02:00
Peter Simons
8ee5bd585f haskell-sloane: update to version 1.9.3 
This version supports the latest optparse-applicative.
 2014-10-06 11:21:39 +02:00
Michael Raskin
50e55fd793 Update PARI 2014-09-24 13:32:46 +04:00
Siarhei Zirukin
00298c7bba added pcalc package 2014-09-19 13:31:52 +02:00
Eelco Dolstra
91ec6e0d90 Merge remote-tracking branch 'origin/master' into staging 2014-09-18 22:28:35 +02:00
Aristid Breitkreuz
6fc7efa7b3 add mathematica 10 (slightly borked but runs) 2014-09-17 23:25:35 +02:00
Vladimír Čunát
d957b4bd78 Merge recent master into staging 
Hydra nixpkgs: ?compare=1151601
 2014-09-13 21:48:29 +02:00
Peter Simons
b9f7f19820 R: Revert update to version 3.1.1 
This reverts commit 6e803a684f. The new version
fails its test suite [1]. The issue has been reported upstream [2].

[1] http://hydra.cryp.to/build/191457/nixlog/1/raw
[2] https://bugs.r-project.org/bugzilla/show_bug.cgi?id=15975
 2014-09-13 20:03:44 +02:00
Pascal Wittmann
8d67b9a240 transformed meta.maintainers of some packages into lists 2014-09-13 13:52:02 +02:00
Peter Simons
6e803a684f R: update to version 3.1.1 2014-09-12 15:20:06 +02:00
Vladimír Čunát
82797f98f2 Merge branch 'staging' into modular-stdenv 
Conflicts:
	pkgs/development/interpreters/perl/5.10/setup-hook.sh
	pkgs/development/interpreters/perl/5.8/setup-hook.sh
	pkgs/stdenv/linux/default.nix
 2014-09-08 18:24:58 +02:00
Michael Raskin
bacd3e852d Update pari 2014-09-02 14:25:17 +04:00
Bjørn Forsman
c9baba9212 Fix many package descriptions 
(My OCD kicked in today...)

Remove repeated package names, capitalize first word, remove trailing
periods and move overlong descriptions to longDescription.

I also simplified some descriptions as well, when they were particularly
long or technical, often based on Arch Linux' package descriptions.

I've tried to stay away from generated expressions (and I think I
succeeded).

Some specifics worth mentioning:
 * cron, has "Vixie Cron" in its description. The "Vixie" part is not
   mentioned anywhere else. I kept it in a parenthesis at the end of the
   description.

 * ctags description started with "Exuberant Ctags ...", and the
   "exuberant" part is not mentioned elsewhere. Kept it in a parenthesis
   at the end of description.

 * nix has the description "The Nix Deployment System". Since that
   doesn't really say much what it is/does (especially after removing
   the package name!), I changed that to "Powerful package manager that
   makes package management reliable and reproducible" (borrowed from
   nixos.org).

 * Tons of "GNU Foo, Foo is a [the important bits]" descriptions
   is changed to just [the important bits]. If the package name doesn't
   contain GNU I don't think it's needed to say it in the description
   either.
 2014-08-24 22:31:37 +02:00
Eelco Dolstra
e3f7dbbac8 Cleanup: Use += to append to envHooks 2014-08-09 12:47:05 +02:00
Vladimír Čunát
52d9c93abe Merge 'staging' into master 2014-08-08 20:13:23 +02:00
Eelco Dolstra
8a7f3c3618 Mark a bunch of packages as broken or not supported on Darwin 2014-08-08 17:59:02 +02:00
Peter Simons
9226fbf56a Merge remote-tracking branch 'origin/master' into staging. 2014-08-08 09:51:01 +02:00
Peter Simons
09ea413e17 haskell-sloane: update to version 1.9.1 2014-08-07 12:41:55 +02:00
Peter Simons
2d326e5032 Merge remote-tracking branch 'origin/master' into staging. 
Conflicts:
	pkgs/desktops/e18/enlightenment.nix
 2014-08-04 16:51:47 +02:00
Peter Simons
d0ca8c237e Fix broken license references. 2014-07-28 11:43:20 +02:00
Peter Simons
ad934ccc22 singular: cosmetic fix for syntax highlighting 2014-07-28 11:42:49 +02:00
Mateusz Kowalczyk
7a45996233 Turn some license strings into lib.licenses values 2014-07-28 11:31:14 +02:00
Eelco Dolstra
b9d19af3e6 Merge remote-tracking branch 'origin/master' into staging 2014-07-15 12:14:35 +02:00
Peter Simons
5bfb58a8a2 Re-generate Haskell packages with cabal2nix. 2014-07-14 17:33:52 +02:00
Eelco Dolstra
95b828de42 Merge remote-tracking branch 'origin/master' into staging 2014-07-07 13:16:26 +02:00
Peter Simons
0d414a9399 haskell-sloane: update to version 1.8.2 2014-07-04 11:45:43 +02:00
Eelco Dolstra
06fc1ec34d Merge remote-tracking branch 'origin/master' into staging 
Conflicts:
	pkgs/servers/serfdom/default.nix
 2014-07-01 11:25:41 +02:00
Eelco Dolstra
40f7b0f9df Another attempt to eradicate ensureDir 
See c556a6ea46.
 2014-06-30 14:56:10 +02:00
Benno Fünfstück
e10001042d fetchbzr, fetchdarcs, fetchhg: use rev attr 
This makes it match the behaviour of fetchgit and fetchsvn, so it's
easier to write scripts that support all of them.
 2014-06-28 21:06:10 +02:00
Peter Simons
1380b62fdb haskell-sloane: update to version 1.8 2014-06-13 15:41:25 +02:00
Ellis Whitehead
a257d14925 R: install lib/libR.so for use by other programs such as RStudio 2014-05-17 21:35:02 +02:00
Peter Simons
ef05fad51a R: don't restrict meta.platforms to Linux; other architectures should build fine 2014-05-04 22:04:44 +02:00
Peter Simons
a9258080b1 R: don't install the "recommended packages" 
These packages come with R, but if we install them as part of this build, then
we cannot update them without re-building R as well. Instead, we add those
packages to the R environment through the r-wrapper. This means that
recommended packages can be updated in cran-packgaes.nix, and those updates
have an effect on the installation without re-building R itself.
 2014-05-04 21:12:34 +02:00
Peter Simons
4700996bc7 haskell-sloane: update to version 1.7.1 2014-05-01 21:57:03 +02:00
Eelco Dolstra
fe4bc3cc80 Fix evaluation error 
http://hydra.nixos.org/build/10697257
 2014-04-29 20:40:28 +02:00
Peter Simons
6c5d7a63ac haskell-sloane: update to version 1.7 2014-04-29 01:35:45 +02:00
John Wiegley
7ce39b067a Add expression for sage 2014-04-22 14:10:36 -05:00
Peter Simons
b5773eeccb R: update to version 3.1.0 2014-04-11 12:07:00 +02:00
Peter Simons
f2cb92f5d4 maxima: update to version 5.33.0 2014-04-03 20:13:35 +02:00
Anders Claesson
ac3de98f07 Add sloane -- a command line interface to OEIS. 2014-03-18 14:37:56 +00:00
Peter Simons
41e0214bb1 R: update to version 3.0.3 2014-03-07 22:51:39 +01:00
Peter Simons
5fefec3944 pspp: update from 0.8.1 to 0.8.2 2014-01-25 20:58:49 +01:00
Peter Simons
6475f0d1fe fricas: clean up meta section 2014-01-20 18:20:08 +01:00
Roger Mason
3d1f6e3a75 Add fricas, a computer algebra system 2014-01-20 18:11:09 +01:00
Peter Simons
25411b3c7b maxima: update to version 5.32.1 2014-01-13 17:05:45 +01:00
Nixpkgs Monitor
7289affced pari: update from 2.5.4 to 2.5.5 2013-12-21 02:28:25 +02:00
Nixpkgs Monitor
b3f1ee3863 jags: update from 2.2.0 to 3.4.0 2013-12-18 18:18:32 +02:00
Jonas Hoersch
8487fdd209 mathematica: fix x86 build of mathematica 
the MathInstaller doesn't distinguish between 64bit and 32bit linux
platforms.
 2013-11-03 14:01:59 +01:00
Peter Simons
cd1605f729 maxima: update to version 5.31.3 2013-11-01 10:53:44 +01:00