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Commit Graph

34 Commits

Author SHA1 Message Date
László Kupcsik
68a9012606 rPackages.rgoslin: fix build 
- Remove unnecessary patch
- Disable parallel building, removes header file before it's used
 2024-06-02 23:16:14 +02:00
Bruno Rodrigues
b841a48d3a rPackages.spMC: fixed build 2024-05-28 17:07:03 +02:00
Justin Bedő
9ca3f64961
Merge pull request #307071 from Kupac/fix_immunotation 
rPackages.immunotation: cache external URLs
 2024-05-27 10:19:33 +10:00
László Kupcsik
d69d444fe1 rPackages.immunotation: cache external URLs 2024-04-26 23:26:40 +02:00
Justin Bedő
4b7e20a7ce
Merge pull request #304916 from Kupac/fix_rgoslin 
rPackages.rgoslin: fix build
 2024-04-20 13:57:00 +10:00
László Kupcsik
2684333c15 rPackages.rgoslin: add missing header 2024-04-19 22:40:28 +02:00
László Kupcsik
8628dda9b9 rPackages.FLAMES: fix build 2024-04-10 23:04:40 +02:00
László Kupcsik
03612d86ad rPackages.universalmotif: fix build 
No need to try to strip debug symbols, Nix will do it anyway
 2024-03-31 23:36:55 +02:00
Derek Hansen
aa866f5189 rPackages.rhdf5: fix build on aarch64-darwin 2024-02-06 17:06:10 -05:00
Justin Bedo
9941724e23
rPackages.rhdf5filters: simplify patch 2024-01-17 09:34:31 +11:00
Justin Bedo
a947ea124a
rPackages.rhdf5filters: fix build 2024-01-15 16:07:47 +11:00
Justin Bedo
63d60675b2
rPackages.rhdf5filters: update patch 2023-06-01 08:28:33 +10:00
Justin Bedo
445df9ef48
rPackages.Rhdflib: patch linking flags 2023-03-23 15:19:58 +11:00
Justin Bedo
14db22f868
rPackages.rhdf5: fix build 
use nixpkgs provided hdf5 instead of vendored library
 2023-03-22 09:48:06 +11:00
Justin Bedo
442e1b87d1
rPackages.rhdf5filters: fix build 
- use hdf5-blosc from nixpkgs to fix failing vendored build
- add missing build dependencies
 2023-03-22 09:47:58 +11:00
Justin Bedo
ccfbc19630
rPackages.Rhdf5lib: fix build 
use nixpkgs provided hdf5 and libaec to resolve failing vendored code
 2023-03-22 09:47:48 +11:00
Justin Bedo
1249b08676
rPackages.RNifti: fix build 2022-11-02 10:14:57 +11:00
Justin Bedo
72c388eed4
rPackages.Rhdf5lib: fix build 
Patch is no-longer necessary; HDF5 no-longer vendored
 2022-05-06 10:54:43 +10:00
Justin Bedo
95d69d32d9
rPackages.RNifti: use nixpkgs zlib 
Build was failing due to incorrect zlib macro expansion.
Patch to use nixpkgs zlib rather than vendored copy.
 2022-03-14 13:50:02 +11:00
Justin Bedo
1f0317cd5b
rPackages.BayesXsrc: fix build 2021-10-26 09:31:32 +11:00
Justin Bedo
db5b03ba89
rPackages.EMCluster: fix build 2021-10-13 06:59:10 +11:00
Ivan Tkatchev
634ac0e565 rhdf5: fix build (#125101) 2021-06-03 22:29:59 +03:00
Luka Blaskovic
0601f34356 R: remove qtbase.patch and fix few CRAN packages 2020-11-05 06:42:38 +00:00
c0bw3b
9cb260d091 [treewide] delete unused patches 2019-05-04 19:52:24 +02:00
Markus Ankenbrand
89f44c1314 rPackages.rhdf5: fix installation 
Fix #43285
 2018-07-10 16:38:11 +02:00
Markus Ankenbrand
9eeea0b9ef rPackages.rhdf5: fix installation 
Fix #42878
 2018-07-02 18:51:18 +02:00
Justin Bedo
cfc07bcf0e
bioconductor: 3.4 -> 3.6 2018-02-21 09:58:17 +11:00
Nikolay Amiantov
477b507a4f rPackages: remove old cuda-related patches 
gputools doesn't build but because of unrelated linking issues.
 2017-02-28 17:31:07 +03:00
Tobias Geerinckx-Rice
32d40f0f98 Remove no longer (or never) referenced patches 
55 files changed, 6041 deletions. Tested with `nix-build -A tarball`.
 2016-01-24 02:02:21 +01:00
Bjørn Forsman
22321f2e58 cudatoolkit: don't move $out/include to $out/usr_include 
This effectively reverts 86c283824f
("If cuda headers are presented to nix [...]") and all the following
workarounds that was added due to that commit.

As far as I can tell[1] this hack isn't needed anymore. And moving
includes to $out/usr_include causes pain for cudatoolkit users, so
better get rid of it.

In patches that did more than the $out/usr_include workaround, I only
changed the line back to $out/include instead of re-generating the
patches and fully removing the changed line.

[1]: I build tested blender and caffe, and temporarily added
recurseIntoAttrs to rPackages and haskellPackages so that nox-review
could get proper coverage. However, many of the packages do not build
even before this patch. I also built CUDA samples with cudatoolkit7
that ran fine.
 2015-09-10 10:35:40 +02:00
Thomas Tuegel
b120a737fd rPackages.BayesLogit: build with openblas 2015-06-09 11:43:00 -05:00
Nikolay Amiantov
8450ff3ab8 rPackages: fix broken packages 2015-02-19 23:53:36 +03:00
taku0
4647743ed7 cran-packages: updated sources 2014-12-03 16:28:28 +01:00
taku0
2a1d9ddbf2 cran-packages: restructured 2014-12-03 16:28:28 +01:00