Commit Graph

10188 Commits

Author SHA1 Message Date
7c6f434c
9ec0e7ca4e
sage: work around glpk aarch64 issue instead of disabling test (#351248) 2024-10-29 15:57:38 +00:00
OTABI Tomoya
31ce2c564f
libcifpp: 7.0.4 -> 7.0.7; dssp: 4.4.8 -> 4.4.10 (#349679) 2024-10-29 18:00:21 +09:00
Aleksana
b9bef336b2
xschem: 3.4.4 -> 3.4.5 (#350226) 2024-10-28 22:51:45 +08:00
Nick Cao
bb579bc293
eigenmath: 3.27-unstable-2024-10-02 -> 3.27-unstable-2024-10-18 (#351034) 2024-10-27 10:17:51 -04:00
Artturin
101a57cbf7
root: workaround upsteam issue 14778 (#292446) 2024-10-27 15:58:24 +02:00
Weijia Wang
2c61d97aa1
nvc: 1.14.0 -> 1.14.1 (#351505) 2024-10-27 13:24:03 +01:00
Aleksana
1cc1588ef9
bwa-mem2: fix build on x86_64-darwin (#351356) 2024-10-27 11:54:29 +08:00
R. Ryantm
dadeac0a1a nvc: 1.14.0 -> 1.14.1 2024-10-26 23:41:13 +02:00
Mauricio Collares
ec99bd832d sage: work around glpk aarch64 issue instead of disabling test 2024-10-26 21:10:47 +02:00
Francesco Gazzetta
68576df997 treewide: move tcl libraries under tclPackages 2024-10-26 16:23:15 +00:00
Markus Kowalewski
febb639ea4
openmolcas: 24.06 -> 24.10, make qcmaquis optional (#351201) 2024-10-26 16:33:22 +02:00
natsukium
afaf2aab04
bwa-mem2: fix build on x86_64-darwin 2024-10-26 15:48:16 +09:00
Guillaume Girol
5584e3590e
bitwuzla: 0.5.0 -> 0.6.0 (#350779) 2024-10-25 23:39:04 +02:00
Phillip Seeber
9d247d73c9 openmolcas: 24.06 -> 24.10, make qcmaquis optional 2024-10-25 17:29:22 +02:00
R. Ryantm
d1c9a5003a cytoscape: 3.10.2 -> 3.10.3 2024-10-25 05:05:59 +00:00
Nick Cao
710da54cbf
eigenmath: 3.27-unstable-2024-10-02 -> 3.27-unstable-2024-10-18
Diff: 57a7c74623...a9d3be2c64
2024-10-24 17:32:03 -04:00
Vincent Laporte
9d28bd753f cadical: enable version 2.0.0 and use it in cvc5 2024-10-24 16:40:10 +02:00
R. Ryantm
40e5d1b10e bitwuzla: 0.5.0 -> 0.6.0 2024-10-23 20:02:05 +00:00
piegames
ad8d051645
treewide: Fix indentation in strings (#350296) 2024-10-23 21:44:22 +02:00
Mauricio Collares
7dace11053
jmol: 16.2.21 -> 16.3.1 (#349514) 2024-10-23 13:18:16 +02:00
Mauricio Collares
14727d96eb sage: use jre8 2024-10-22 22:24:57 +02:00
piegames
68927918d0 treewide: Fix indentation in strings
The indentation stripping semantics of strings are fairly bad and have a
few gotchas where the resulting string has not the intended indentation.
This commit fixes most if not all such instances in Nixpkgs.

I tried to strive a balance between keeping the diff small and
reformatting/refactoring the code to look better. In general,
reformatting should be left to Nixfmt.

Note that this causes a lot of rebuilds by design. All changes need to
be thoroughly vetted and reviewed for correctness. There is no automatic
way to prove correctness.

List of files to fix generated by running
https://gerrit.lix.systems/c/lix/+/2092 on Nixpkgs and looking at the
warnings.
2024-10-22 21:36:42 +02:00
Mauricio Collares
7783a48f38
polymake: 4.12 -> 4.13 (#348571) 2024-10-22 17:43:18 +02:00
Markus Kowalewski
c4875a446f
mpiCheckPhaseHook: add parameters to bypass errors in sandbox (#350112) 2024-10-21 14:11:57 +02:00
Federico Beffa
cfd8f6613b xschem: move to name based directory 2024-10-21 14:01:30 +02:00
Federico Beffa
87c7e94cff xschem: 3.4.4 -> 3.4.5 2024-10-21 13:58:47 +02:00
qbisi
3e08945b40 nwchem: mark supported on aarch64 2024-10-21 07:21:19 +08:00
qbisi
3aeaac6b8e nwchem: replace nativeCheckInputs with nativeInstallCheckInputs 2024-10-21 07:21:08 +08:00
Dmitry Kalinkin
306aabb533
bump yoda and rivet to next major versions, switch to hepmc3 (#349825) 2024-10-20 17:47:05 -04:00
Dmitry Kalinkin
6fc8fe28aa rivet: 3.1.10 -> 4.0.1 2024-10-19 13:34:21 -04:00
Dmitry Kalinkin
082c425593 sherpa: 2.2.15 -> 2.2.16 2024-10-19 13:34:21 -04:00
R. Ryantm
3dd4dedc78 diamond: 2.1.9 -> 2.1.10 2024-10-19 14:23:13 +00:00
Peder Bergebakken Sundt
2e76e61c3c
crystfel: 0.11.0 -> 0.11.1 (#348763) 2024-10-19 05:42:22 +02:00
Peder Bergebakken Sundt
c0ff432b79
mavproxy: 1.80.70 -> 1.8.71 (#348020) 2024-10-19 05:07:14 +02:00
natsukium
1857e1080e
dssp: 4.4.8 -> 4.4.10
Diff: https://github.com/PDB-REDO/dssp/compare/refs/tags/v4.4.8...v4.4.10

Changelog: https://github.com/PDB-REDO/dssp/releases/tag/v4.4.10
2024-10-19 11:31:00 +09:00
Justin Bedő
58e4dcdf86
last: 1550 -> 1592 (#349510) 2024-10-19 08:28:48 +11:00
R. Ryantm
df4ed58e09 jmol: 16.2.21 -> 16.3.1 2024-10-18 10:42:18 +00:00
R. Ryantm
dfcd56c83b last: 1550 -> 1592 2024-10-18 10:40:57 +00:00
7c6f434c
6d43118283 golly: 4.2 -> 4.3 2024-10-18 10:21:23 +02:00
Aleksana
b003f9debf
cadical: 2.0.0 -> 2.1.0 (#348755) 2024-10-17 17:36:02 +08:00
Gaetan Lepage
3c971bb4f9 snakemake: move to by-name 2024-10-16 08:34:58 +02:00
R. Ryantm
1815d5a7a7 verilator: 5.026 -> 5.028 2024-10-15 11:16:32 -05:00
lassulus
8035ca55f7
kissat: 3.1.1 -> 4.0.1 (#348312) 2024-10-15 14:37:45 +02:00
Stanisław Pitucha
f5623c3bd0
cmtk: darwin (#348718) 2024-10-15 21:54:35 +11:00
R. Ryantm
47ebcc0e07 cadical: 2.0.0 -> 2.1.0 2024-10-15 10:13:43 +00:00
Doron Behar
b7f91a266c
wxmaxima: 24.05.0 -> 24.08.0 (#348539) 2024-10-15 12:27:53 +03:00
Stanisław Pitucha
9f1d63f8d4 cmtk: darwin
Fix the Darwin build. It required the same c++ standard setting as other platforms.
Moved the options to cmake format too.
2024-10-15 18:48:24 +11:00
R. Ryantm
01a21114cf polymake: 4.12 -> 4.13 2024-10-14 16:58:07 +00:00
Nick Cao
63e9af1f34
stacks: 2.66 -> 2.68 (#348422) 2024-10-14 12:21:55 -04:00
R. Ryantm
31ca06ca58 wxmaxima: 24.05.0 -> 24.08.0 2024-10-14 13:52:23 +00:00