Commit Graph

10208 Commits

Author SHA1 Message Date
Tomo
22f235290d
key: 2.10.0 -> 2.12.2 (#350313) 2024-10-31 14:02:58 -07:00
Fabian Affolter
3c9071f916
python312Packages.types-requests: 2.32.0.20240914 -> 2.32.0.20241016 (#349418) 2024-10-31 17:57:41 +01:00
Fabian Affolter
5f587e764d cwltool: 3.1.20240708091337 -> 3.1.20241024121129
Diff: https://github.com/common-workflow-language/cwltool/compare/refs/tags/3.1.20241024121129...3.1.20241024121129

Changelog: https://github.com/common-workflow-language/cwltool/releases/tag/3.1.20241024121129
2024-10-31 12:53:03 +01:00
FliegendeWurst
65082aa666 key: 2.10.0 -> 2.12.2 2024-10-31 09:49:58 +01:00
Reno Dakota
8fa1386a98
apbs: add libutil for darwin 2024-10-31 07:26:33 +00:00
K900
6968567d60 Merge remote-tracking branch 'origin/master' into staging-next 2024-10-30 21:25:05 +03:00
Markus Kowalewski
5d3d5b89df
openmolcas: remove static libraries in output (#352074) 2024-10-30 16:15:18 +01:00
Nick Cao
8a1dde7920
sv-lang: fix cross compilation (#351901) 2024-10-30 09:20:27 -04:00
Markus Kowalewski
5ad947701f openmolcas: apply nixfmt 2024-10-30 10:37:10 +01:00
Markus Kowalewski
356e7ac19c openmolcas: remove nested with in meta 2024-10-30 10:37:10 +01:00
Markus Kowalewski
00e7e7f70b openmolcas: remove superflous cmakeFlag for openblas 2024-10-30 10:37:10 +01:00
Markus Kowalewski
adaaba7b85 openmolcas: properly build shared libs.
Remove unneeded static libs when build as static build.
2024-10-30 10:37:05 +01:00
Robert Scott
5c750ede24 openrefine: 3.8.2 -> 3.8.5 2024-10-29 22:45:26 +00:00
github-actions[bot]
09d8c7ec2f
Merge master into staging-next 2024-10-29 18:04:32 +00:00
7c6f434c
9ec0e7ca4e
sage: work around glpk aarch64 issue instead of disabling test (#351248) 2024-10-29 15:57:38 +00:00
github-actions[bot]
6bc001ea3b
Merge master into staging-next 2024-10-29 12:06:00 +00:00
OTABI Tomoya
31ce2c564f
libcifpp: 7.0.4 -> 7.0.7; dssp: 4.4.8 -> 4.4.10 (#349679) 2024-10-29 18:00:21 +09:00
K900
0c45a8b5c4 Merge remote-tracking branch 'origin/master' into staging-next 2024-10-28 21:46:13 +03:00
Aleksana
b9bef336b2
xschem: 3.4.4 -> 3.4.5 (#350226) 2024-10-28 22:51:45 +08:00
Nick Cao
e7a0b152a6
sv-lang: fix cross compilation 2024-10-28 10:27:58 -04:00
Fabián Heredia Montiel
34b62f7c47 Merge remote-tracking branch 'origin/master' into staging-next 2024-10-27 16:10:56 -06:00
Nick Cao
bb579bc293
eigenmath: 3.27-unstable-2024-10-02 -> 3.27-unstable-2024-10-18 (#351034) 2024-10-27 10:17:51 -04:00
Artturin
101a57cbf7
root: workaround upsteam issue 14778 (#292446) 2024-10-27 15:58:24 +02:00
Weijia Wang
2c61d97aa1
nvc: 1.14.0 -> 1.14.1 (#351505) 2024-10-27 13:24:03 +01:00
Mauricio Collares
8a1337980b
[staging-next] sage: import sympy and numpy update patches (#351470) 2024-10-27 10:37:35 +01:00
Aleksana
1cc1588ef9
bwa-mem2: fix build on x86_64-darwin (#351356) 2024-10-27 11:54:29 +08:00
R. Ryantm
dadeac0a1a nvc: 1.14.0 -> 1.14.1 2024-10-26 23:41:13 +02:00
Mauricio Collares
ec99bd832d sage: work around glpk aarch64 issue instead of disabling test 2024-10-26 21:10:47 +02:00
Francesco Gazzetta
68576df997 treewide: move tcl libraries under tclPackages 2024-10-26 16:23:15 +00:00
Mauricio Collares
32f02aed22 sage: import sympy and numpy update patches 2024-10-26 17:35:23 +02:00
Markus Kowalewski
febb639ea4
openmolcas: 24.06 -> 24.10, make qcmaquis optional (#351201) 2024-10-26 16:33:22 +02:00
natsukium
afaf2aab04
bwa-mem2: fix build on x86_64-darwin 2024-10-26 15:48:16 +09:00
Guillaume Girol
5584e3590e
bitwuzla: 0.5.0 -> 0.6.0 (#350779) 2024-10-25 23:39:04 +02:00
Phillip Seeber
9d247d73c9 openmolcas: 24.06 -> 24.10, make qcmaquis optional 2024-10-25 17:29:22 +02:00
R. Ryantm
d1c9a5003a cytoscape: 3.10.2 -> 3.10.3 2024-10-25 05:05:59 +00:00
Nick Cao
710da54cbf
eigenmath: 3.27-unstable-2024-10-02 -> 3.27-unstable-2024-10-18
Diff: 57a7c74623...a9d3be2c64
2024-10-24 17:32:03 -04:00
Vincent Laporte
9d28bd753f cadical: enable version 2.0.0 and use it in cvc5 2024-10-24 16:40:10 +02:00
R. Ryantm
40e5d1b10e bitwuzla: 0.5.0 -> 0.6.0 2024-10-23 20:02:05 +00:00
piegames
ad8d051645
treewide: Fix indentation in strings (#350296) 2024-10-23 21:44:22 +02:00
Mauricio Collares
7dace11053
jmol: 16.2.21 -> 16.3.1 (#349514) 2024-10-23 13:18:16 +02:00
Mauricio Collares
14727d96eb sage: use jre8 2024-10-22 22:24:57 +02:00
piegames
68927918d0 treewide: Fix indentation in strings
The indentation stripping semantics of strings are fairly bad and have a
few gotchas where the resulting string has not the intended indentation.
This commit fixes most if not all such instances in Nixpkgs.

I tried to strive a balance between keeping the diff small and
reformatting/refactoring the code to look better. In general,
reformatting should be left to Nixfmt.

Note that this causes a lot of rebuilds by design. All changes need to
be thoroughly vetted and reviewed for correctness. There is no automatic
way to prove correctness.

List of files to fix generated by running
https://gerrit.lix.systems/c/lix/+/2092 on Nixpkgs and looking at the
warnings.
2024-10-22 21:36:42 +02:00
Mauricio Collares
7783a48f38
polymake: 4.12 -> 4.13 (#348571) 2024-10-22 17:43:18 +02:00
Markus Kowalewski
c4875a446f
mpiCheckPhaseHook: add parameters to bypass errors in sandbox (#350112) 2024-10-21 14:11:57 +02:00
Federico Beffa
cfd8f6613b xschem: move to name based directory 2024-10-21 14:01:30 +02:00
Federico Beffa
87c7e94cff xschem: 3.4.4 -> 3.4.5 2024-10-21 13:58:47 +02:00
qbisi
3e08945b40 nwchem: mark supported on aarch64 2024-10-21 07:21:19 +08:00
qbisi
3aeaac6b8e nwchem: replace nativeCheckInputs with nativeInstallCheckInputs 2024-10-21 07:21:08 +08:00
Dmitry Kalinkin
306aabb533
bump yoda and rivet to next major versions, switch to hepmc3 (#349825) 2024-10-20 17:47:05 -04:00
Dmitry Kalinkin
6fc8fe28aa rivet: 3.1.10 -> 4.0.1 2024-10-19 13:34:21 -04:00