Commit Graph

9558 Commits

Author SHA1 Message Date
Pol Dellaiera
8fa80574a0
Merge pull request #320080 from r-ryantm/auto-update/python311Packages.snakemake
python311Packages.snakemake: 8.13.0 -> 8.14.0
2024-06-16 22:12:18 +02:00
h7x4
f2d31ff7c1
Merge pull request #319520 from r-ryantm/auto-update/kent
kent: 465 -> 466
2024-06-16 16:40:51 +02:00
Emily
4b1d39d935 treewide: remove myself from packages I don’t use
I’ve had an extended absence from Nix work and no longer actively
use a bunch of packages I used to maintain, so remove myself as a
maintainer from things I can’t usefully review/test changes for
as I ease back into things. This does unfortunately leave a few
packages orphaned (`stm32loader`, `tinyprog`, `python3Packages.fx2`,
and `python3Packages.jsonmerge`).
2024-06-15 16:53:23 +01:00
R. Ryantm
b7421e6cf7 python311Packages.snakemake: 8.13.0 -> 8.14.0 2024-06-15 15:30:33 +00:00
R. Ryantm
2a5d67ff74 kent: 465 -> 466 2024-06-13 08:40:27 +00:00
Nick Cao
728f17ee41
Merge pull request #319423 from r-ryantm/auto-update/eigenmath
eigenmath: 3.26-unstable-2024-06-03 -> 3.26-unstable-2024-06-09
2024-06-12 21:52:46 -04:00
R. Ryantm
5723eefe6c eigenmath: 3.26-unstable-2024-06-03 -> 3.26-unstable-2024-06-09 2024-06-13 00:06:31 +00:00
Dmitry Kalinkin
7950c8d688
professor: 2.3.3 -> 2.4.2 (#318911) 2024-06-12 18:26:03 -04:00
Martin Joerg
df5a102839 cryptoverif: 2.08pl1 -> 2.09
f32a46b5ac/CHANGES
2024-06-12 15:01:36 +02:00
Weijia Wang
9c9a88747b
Merge pull request #315778 from r-ryantm/auto-update/gwyddion
gwyddion: 2.65 -> 2.66
2024-06-10 19:37:59 +02:00
Weijia Wang
14df049746
Merge pull request #318689 from r-ryantm/auto-update/ants
ants: 2.5.1 -> 2.5.2
2024-06-10 16:52:14 +02:00
Peder Bergebakken Sundt
91fed2bd84
Merge pull request #316965 from r-ryantm/auto-update/jbrowse
jbrowse: 2.11.1 -> 2.11.2
2024-06-10 15:47:47 +02:00
7c6f434c
7b75a79581
Merge pull request #318493 from r-ryantm/auto-update/jmol
jmol: 16.2.15 -> 16.2.17
2024-06-10 08:51:34 +00:00
R. Ryantm
27993b515e ants: 2.5.1 -> 2.5.2 2024-06-10 04:29:13 +00:00
Alexis Hildebrandt
f8c4a98e8e treewide: Remove the definite article from meta.description
nix run nixpkgs#silver-searcher -- -G '\.nix$' -0l 'description.*"([Tt]he)? ' pkgs \
  | xargs -0 nix run nixpkgs#gnused -- -i '' -Ee 's/(description.*")[Tt]he (.)/\1\U\2/'
2024-06-09 23:08:46 +02:00
Alexis Hildebrandt
755b915a15 treewide: Remove indefinite article from meta.description
nix run nixpkgs#silver-searcher -- -G '\.nix$' -0l 'description.*"[Aa]n?' pkgs \
  | xargs -0 nix run nixpkgs#gnused -- -i '' -Ee 's/(description.*")[Aa]n? (.)/\1\U\2/'
2024-06-09 23:07:45 +02:00
Alexis Hildebrandt
bf995e3641 treewide: Remove ending period from meta.description
nix run nixpkgs#silver-searcher -- -G '\.nix$' -0l 'description.*".*\.";' pkgs \
  | xargs -0 nix run nixpkgs#gnused -- -i '' -Ee 's/(description.*)\.";/\1";/'
2024-06-09 23:04:51 +02:00
R. Ryantm
3e7ccaebc7 jmol: 16.2.15 -> 16.2.17 2024-06-09 08:50:59 +00:00
R. Ryantm
e10b8c551f xmedcon: 0.23.0 -> 0.24.0 2024-06-09 05:32:44 +00:00
R. Ryantm
17f548b432 python311Packages.snakemake: 8.11.6 -> 8.13.0 2024-06-07 21:11:46 -04:00
Peder Bergebakken Sundt
b227056d29
Merge pull request #291454 from imadnyc/numworks-epsilon
numworks-epsilon: 15.5.0 -> 22.2.0
2024-06-08 02:11:00 +02:00
imad.nyc
07509a06ad numworks-epsilon: 15.5.0 -> 22.2.0
real
2024-06-07 19:00:35 -04:00
Guillaume Girol
da7f6b9bdf
Merge pull request #316654 from symphorien/update_bitwuzla2
bitwuzla: 0.4.0 -> 0.5.0
2024-06-07 21:14:39 +02:00
Gaetan Lepage
92555723b7 python311Packages.mujoco: add TODO for updating the dependencies 2024-06-07 08:21:18 +02:00
Gaetan Lepage
7e7ddf4e4c mujoco: add GaetanLepage to maintainers 2024-06-07 08:21:18 +02:00
Gaetan Lepage
1dcda38ec7 mujoco: 3.1.5 -> 3.1.6
Diff:
https://github.com/google-deepmind/mujoco/compare/refs/tags/3.1.5...3.1.6

Changelog:
https://mujoco.readthedocs.io/en/latest/changelog.html#version-3-1-6-jun-3-2024
2024-06-07 08:21:18 +02:00
Nick Cao
6d13f96291
Merge pull request #317591 from r-ryantm/auto-update/eigenmath
eigenmath: 0-unstable-2024-05-18 -> 3.26-unstable-2024-06-03
2024-06-06 07:31:59 -04:00
R. Ryantm
9ea547d315 eigenmath: 0-unstable-2024-05-18 -> 3.26-unstable-2024-06-03 2024-06-05 23:51:54 +00:00
Peder Bergebakken Sundt
c4c7999160
Merge pull request #254623 from TomaSajt/mathmod
mathmod: init at 11.1-unstable-2024-01-26
2024-06-06 00:46:00 +02:00
Connor Baker
4adc42b9d0
Merge pull request #317310 from ConnorBaker/fix/python3Packages.neuronpy
neuron: 8.2.3 -> 8.2.4; fixup
2024-06-05 15:32:01 -04:00
Dmitry Kalinkin
63f559ca65
Merge pull request #317301 from DaGenix/update-mypy
Update mypy to version 1.10.0
2024-06-05 13:50:35 -04:00
Sandro
6ddceff8df
Merge pull request #317075 from ConnorBaker/fix/labplot 2024-06-05 01:17:35 +02:00
Connor Baker
d63eb88a50 neuron: 8.2.3 -> 8.2.4; fixup 2024-06-04 22:29:48 +00:00
Palmer Cox
e6b776ccb0 cwltool: 3.1.20240404144621 -> 3.1.20240508115724 2024-06-04 17:09:55 -04:00
R. Ryantm
44be0c6946 gwyddion: 2.65 -> 2.66 2024-06-04 22:31:43 +02:00
Weijia Wang
bf6305d472
Merge pull request #315770 from r-ryantm/auto-update/tulip
tulip: 5.7.3 -> 5.7.4
2024-06-04 22:02:20 +02:00
Connor Baker
b5461e20c1 labplot: patch permissive cast 2024-06-04 03:25:24 +00:00
R. Ryantm
6f871a7736 jbrowse: 2.11.1 -> 2.11.2 2024-06-03 16:39:21 +00:00
superherointj
2037c8febc openrefine: normalize doCheck 2024-06-02 21:35:13 -03:00
Pol Dellaiera
de2d4e9e40
Merge pull request #316554 from r-ryantm/auto-update/prooftree
prooftree: 0.13 -> 0.14
2024-06-02 23:16:03 +02:00
Pol Dellaiera
ae80850b94
Merge pull request #316556 from r-ryantm/auto-update/kent
kent: 446 -> 465
2024-06-02 21:30:23 +02:00
Weijia Wang
026005ab69
Merge pull request #312446 from r-ryantm/auto-update/bowtie2
bowtie2: 2.5.3 -> 2.5.4
2024-06-02 17:26:37 +02:00
Weijia Wang
5054c46e36
Merge pull request #308298 from r-ryantm/auto-update/python311Packages.gmsh
python311Packages.gmsh: 4.12.2 -> 4.13.1
2024-06-02 15:18:47 +02:00
Guillaume Girol
f014663fe4 bitwuzla: 0.4.0 -> 0.5.0 2024-06-02 12:00:00 +00:00
R. Ryantm
32feef3965 kent: 446 -> 465 2024-06-02 01:34:52 +00:00
R. Ryantm
596212c22c prooftree: 0.13 -> 0.14 2024-06-02 01:31:21 +00:00
Dmitry Kalinkin
a37a6e107f
Merge pull request #310309 from guitargeek/root_632
root: 6.30.06 -> 6.32.00
2024-06-01 19:56:31 -04:00
Weijia Wang
541e28d488
Merge pull request #308242 from r-ryantm/auto-update/systemc
systemc: 2.3.4 -> 3.0.0
2024-06-02 01:17:28 +02:00
R. Ryantm
f46e7c4e2e python311Packages.gmsh: 4.12.2 -> 4.13.1 2024-06-02 01:08:11 +02:00
Weijia Wang
ff4b7d9847
Merge pull request #301077 from r-ryantm/auto-update/magic-vlsi
magic-vlsi: 8.3.465 -> 8.3.483
2024-06-01 22:09:19 +02:00