84 Commits

Author	SHA1	Message	Date
Justin Bedo	982010d219	htslib: 1.13 -> 1.14	2022-01-06 13:22:49 +11:00
flurie	b91f4d0097	bicgl: fix build for x86_64-darwin	2021-11-21 23:30:54 -05:00
Justin Bedo	292a1d6310	htslib: 1.11 -> 1.13	2021-10-12 10:17:32 +11:00
Ben Darwin	0d7ed306f1	elastix: update homepage	2021-10-05 17:01:42 -04:00
Frederik Rietdijk	dc04d776a3	mirtk: use python3	2021-07-27 20:42:00 +02:00
Felix Buehler	58a2d4b666	development: /s/name/pname&version/	2021-07-02 00:03:10 +02:00
Pavol Rusnak	03518371af	oobicpl: unstable-2016-03-02 -> unstable-2020-08-12	2021-04-17 18:45:19 +02:00
Pavol Rusnak	bc7f4759ec	bicpl: unstable-2017-09-10 -> unstable-2020-10-15	2021-04-17 18:44:13 +02:00
Sandro Jäckel	3453b89f4b	lzma: deprecate alias	2021-04-04 19:49:52 +02:00
Ben Siraphob	66e44425c6	pkgs/development/libraries: stdenv.lib -> lib	2021-01-21 19:11:02 -08:00
zowoq	31f5dd3f36	treewide: editorconfig fixes ... - remove trailing whitespace - use spaces for indentation	2021-01-20 09:11:11 +10:00
Ben Siraphob	3ae5e6ce03	treewide: remove enableParallelBuilding = true if using cmake	2021-01-03 18:37:40 +07:00
Renato Alves	019fa5f608	htslib: 1.10.2 -> 1.11 (#100812)	2020-10-29 11:18:29 +01:00
Ben Darwin	e20652da9b	elastix: 5.0.0 -> 5.0.1; unbreak OS X build	2020-10-17 11:36:31 -07:00
Lassulus	f849b13978	Merge pull request #98571 from bcdarwin/gifticlib ... gifticlib: init at unstable-2020-07-07	2020-10-08 21:48:31 +02:00
Ben Darwin	44d854af30	bicgl: update LIBMINC_DIR due to libminc CMake changes	2020-10-06 15:31:19 -04:00
Ben Darwin	85946918ac	oobicpl: update LIBMINC_DIR due to libminc CMake changes	2020-10-06 15:31:17 -04:00
Ben Darwin	2c33e9d1a4	bicpl: fix LIBMINC_DIR due to libminc CMake changes	2020-10-06 15:31:15 -04:00
Ben Darwin	da69e470f2	EBTKS: update LIBMINC_DIR due to libminc update	2020-10-06 15:31:15 -04:00
Ben Darwin	8a3c9812cc	gifticlib: init at unstable-2020-07-07	2020-09-23 12:07:37 -04:00
Ben Darwin	98512f3eaa	nifticlib: 2.0.0 -> 3.0.1	2020-09-09 15:26:04 -04:00
Ben Darwin	7f656f3ef6	bpp-popgen: init at 2.4.1	2020-05-25 21:12:17 -04:00
Ben Darwin	a53b27829c	bpp-phyl: init at 2.4.1	2020-05-25 21:10:59 -04:00
Ben Darwin	8d712ccc16	bpp-seq: init at 2.4.1	2020-05-25 21:09:52 -04:00
Ben Darwin	adc7b4c979	bpp-core: init at 2.4.1	2020-05-25 21:08:31 -04:00
Ben Darwin	5caa76705b	elastix: update for ITK 5.1.0 ... - fetch patches to build elastix 5.0 with ITK 5.1 - update 'platforms': builds on Darwin, fails on aarch64	2020-05-05 00:08:04 -04:00
Ben Darwin	fe07e2b2ac	elastix: enable tests	2020-04-21 07:54:59 +02:00
Ben Darwin	30cafee8b6	elastix: python -> python3	2020-04-21 07:54:59 +02:00
Michael Reilly	84cf00f980	treewide: Per RFC45, remove all unquoted URLs	2020-04-10 17:54:53 +01:00
R. RyanTM	940d12bf5d	htslib: 1.9 -> 1.10.2	2020-01-06 09:16:51 -08:00
Frederik Rietdijk	f08e3e38d4	Merge master into staging-next	2020-01-02 21:41:13 +01:00
Robin Gloster	2157dcd141	treewide: installFlags is a list	2019-12-30 13:22:43 +01:00
Merijn Broeren	133103d709	treewide: replace make/build/configure/patchFlags with nix lists	2019-12-30 12:58:11 +01:00
Linus Heckemann	2c19725202	mirtk: enable tbb support for multithreading	2019-12-30 01:16:08 +01:00
Renaud	5411dbda33	Merge pull request #71710 from bcdarwin/fix-elastix ... elastix: 4.9.0 -> 5.0.0 (and mark unbroken)	2019-11-18 23:23:16 +01:00
Ben Darwin	b618730708	elastix: 4.9.0 -> 5.0.0 (and mark unbroken)	2019-11-18 13:29:02 -05:00
Ben Darwin	736860d34b	nifticlib and niftseg: change platform from linux to unix since these build on OSX	2019-11-14 21:25:10 -05:00
Linus Heckemann	5aa4b19946	treewide: mark some broken packages as broken ... Refs: e675498026 1e9cc5b984 793a2fe1e8 c19cf65261 f6544d618f	2019-10-08 17:14:26 +02:00
Miguel Madrid Mencía	148c82e07e	maintainer: mimadrid: update github username and personal data	2019-09-14 12:15:46 +02:00
volth	46420bbaa3	treewide: name -> pname (easy cases) (#66585) ... treewide replacement of stdenv.mkDerivation rec { name = "*-${version}"; version = "*"; to pname	2019-08-15 13:41:18 +01:00
volth	f3282c8d1e	treewide: remove unused variables (#63177) ... * treewide: remove unused variables * making ofborg happy	2019-06-16 19:59:05 +00:00
Matthew Bauer	6ed49262f5	treewide: remove BUILD_TESTING flag ... This is now set by CMake	2019-03-11 10:11:28 -04:00
Matthew Bauer	d492f53faf	Merge pull request #50527 from matthewbauer/ninja-check-phase ... Add check phase to ninja setup hook	2018-11-20 16:55:12 -06:00
Matthew Bauer	2c47a4229f	treewide: remove ctest usages ... These are already in the generated makefiles!	2018-11-18 19:31:02 -06:00
schneefux	d81a96e601	mirtk: use fetchFromGitHub instead of fetchgit	2018-10-08 14:33:55 +02:00
Orivej Desh	f0c0e2acc6	htslib: 1.7 -> 1.9	2018-09-21 22:42:28 +00:00
Vladimír Čunát	14aa936ec5	Merge branch 'staging-next' into staging	2018-08-17 20:53:27 +02:00
Vladimír Čunát	cbabebcc2e	Merge branch 'master' into staging-next ... Hydra: ?compare=1473892	2018-08-17 13:45:21 +02:00
Ben Darwin	0adc6f4d8f	mirtk: init at 2.0.0	2018-08-13 15:55:04 -04:00
Jan Malakhovski	b2563a55b7	nifticlib: disable tests	2018-08-11 09:35:38 +00:00