Sergei Trofimovich
428045f39b
bwa: pull upstream fix for -fno-common tollchains
...
Without the change build fails on -fno-common toolchains like upstream
gcc-10 as:
$ nix build -L --impure --expr 'with import ./. {}; bwa.overrideAttrs (oa: { NIX_CFLAGS_COMPILE = (oa.NIX_CFLAGS_COMPILE or "") + "-fno-common"; })'
...
ld: ./libbwa.a(rope.o):/build/bwa-0.7.17/rle.h:33:
multiple definition of `rle_auxtab'; ./libbwa.a(bwtindex.o):/build/bwa-0.7.17/rle.h:33: first defined here
ld: ./libbwa.a(rle.o):/build/bwa-0.7.17/rle.h:33:
multiple definition of `rle_auxtab'; ./libbwa.a(bwtindex.o):/build/bwa-0.7.17/rle.h:33: first defined here
2022-05-08 08:56:43 +01:00
Luis Pedro Coelho
596c5e7ea2
Static bwa
...
AR needs to be passed specifically on the command line
2022-05-04 02:20:50 +02:00
Profpatsch
4a7f99d55d
treewide: with stdenv.lib; in meta -> with lib;
...
Part of: https://github.com/NixOS/nixpkgs/issues/108938
meta = with stdenv.lib;
is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.
This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.
The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00
Justin Bedo
5fc6258043
bwa: expand supported platforms
2020-11-30 09:46:51 +11:00
Robert Scott
f1d2491057
bwa: include static library and some key headers in output
2020-09-20 12:23:18 +01:00
Michael Reilly
84cf00f980
treewide: Per RFC45, remove all unquoted URLs
2020-04-10 17:54:53 +01:00
volth
46420bbaa3
treewide: name -> pname (easy cases) ( #66585 )
...
treewide replacement of
stdenv.mkDerivation rec {
name = "*-${version}";
version = "*";
to pname
2019-08-15 13:41:18 +01:00
Arcadio Rubio García
0d05bcae8c
bwa: 0.7.16a -> 0.7.17
2018-01-22 01:58:36 +00:00
Robin Gloster
a0967948d9
bwa: 0.7.15 -> 0.7.16a
2017-09-05 14:42:45 +02:00
Tuomas Tynkkynen
f87f37c1ee
bwa: Broken on i686
...
http://hydra.nixos.org/build/38236956
2016-08-06 17:06:45 +03:00
Tuomas Tynkkynen
21f17d69f6
treewide: Add lots of meta.platforms
...
Build-tested on x86_64 Linux & Mac.
2016-08-02 21:42:43 +03:00
Luis Pedro Coelho
bd617cb185
init bwa at 0.7.15
...
Closes #16064
2016-06-08 17:25:20 +01:00
