Gaetan Lepage
62da9ca239
mujoco: mark as broken on darwin
2024-02-07 09:58:46 +01:00
Justin Bedő
6b0d1402d7
Merge pull request #286653 from r-ryantm/auto-update/last
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last: 1519 -> 1540
2024-02-07 11:04:57 +11:00
R. Ryantm
0b9427cf71
snakemake: 8.3.2 -> 8.4.4
2024-02-06 18:59:24 -05:00
Robert Scott
d5af553b62
Merge pull request #286741 from das-g/openrefine-mainprogram
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openrefine: set meta.mainProgram
2024-02-06 19:14:07 +00:00
R. Ryantm
8e285cb208
eigenmath: unstable-2024-01-23 -> unstable-2024-02-04
2024-02-06 18:13:08 +00:00
Raphael Das Gupta
13f6915775
openrefine: set meta.mainProgram
2024-02-06 13:49:34 +01:00
R. Ryantm
ad308afcd0
last: 1519 -> 1540
2024-02-06 06:07:25 +00:00
Nikolay Korotkiy
3ca762663e
Merge pull request #286427 from r-ryantm/auto-update/gnuastro
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gnuastro: 0.21 -> 0.22
2024-02-05 19:53:53 +04:00
Nikolay Korotkiy
6d544c6ff1
gnuastro: add meta.changelog
2024-02-05 18:44:12 +04:00
Doron Behar
99f1454341
Merge pull request #286230 from r-ryantm/auto-update/wxmaxima
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wxmaxima: 23.12.0 -> 24.02.0
2024-02-05 16:23:09 +02:00
R. Ryantm
5727c18299
gnuastro: 0.21 -> 0.22
2024-02-05 05:41:57 +00:00
Robert Scott
8904ea5c84
Merge pull request #285426 from r-ryantm/auto-update/seqkit
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seqkit: 2.6.1 -> 2.7.0
2024-02-04 22:59:49 +00:00
Weijia Wang
ab45f7963c
Merge pull request #282757 from r-ryantm/auto-update/bada-bib
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bada-bib: 0.8.0 -> 0.8.1
2024-02-04 23:44:55 +01:00
Weijia Wang
0b8abd7798
Merge pull request #281847 from r-ryantm/auto-update/eggnog-mapper
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eggnog-mapper: 2.1.10 -> 2.1.12
2024-02-04 22:48:27 +01:00
Weijia Wang
c92f88b5e3
Merge pull request #281665 from r-ryantm/auto-update/bowtie2
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bowtie2: 2.5.2 -> 2.5.3
2024-02-04 22:35:03 +01:00
Weijia Wang
d1cf8f73a8
Merge pull request #281484 from r-ryantm/auto-update/gama
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gama: 2.27 -> 2.28
2024-02-04 22:26:51 +01:00
Weijia Wang
cca77236b0
Merge pull request #283967 from r-ryantm/auto-update/magic-vlsi
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magic-vlsi: 8.3.456 -> 8.3.459
2024-02-04 20:45:02 +01:00
Weijia Wang
612a107ae5
Merge pull request #284008 from r-ryantm/auto-update/workcraft
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workcraft: 3.4.1 -> 3.4.2
2024-02-04 20:35:45 +01:00
Weijia Wang
f46ad549e2
Merge pull request #286265 from r-ryantm/auto-update/nvc
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nvc: 1.11.2 -> 1.11.3
2024-02-04 19:31:51 +01:00
Nick Cao
b2d58dc9da
Merge pull request #286155 from risicle/ris-hal-hardware-analyzer-gcc-13
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hal-hardware-analyzer: fix build with gcc 13
2024-02-04 09:42:55 -05:00
Doron Behar
cb6c4d8ac0
wxmaxima.src: use hash instead of sha256
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Co-authored-by: Muhammad Falak R Wani <falakreyaz@gmail.com>
2024-02-04 14:21:06 +00:00
arthsmn
4ee1815267
gplates: 2.3.0 -> 2.4
2024-02-04 14:19:31 +01:00
Weijia Wang
aeaed88f33
nvc: drop libelf on darwin
2024-02-04 14:04:24 +01:00
R. Ryantm
db2a3483c0
nvc: 1.11.2 -> 1.11.3
2024-02-04 12:06:27 +00:00
Felix Bühler
bfda12002a
Merge pull request #285982 from herberteuler/fix/284736-mathematica
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mathematica: minor fixes
2024-02-04 10:14:33 +01:00
R. Ryantm
07d74035fa
wxmaxima: 23.12.0 -> 24.02.0
2024-02-04 07:15:47 +00:00
Robert Scott
ce60e31cbd
hal-hardware-analyzer: fix build with gcc 13
2024-02-03 21:29:44 +00:00
Ben Darwin
d6d8fd86dd
abella: update url, refactor to finalAttrs style
2024-02-03 14:58:27 -05:00
Robert Scott
e5e19d75c0
Merge pull request #265959 from risicle/ris-openrefine
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openrefine: init at 3.7.7
2024-02-03 14:28:55 +00:00
Robert Scott
272f7bb1f4
openrefine: init at 3.7.7
2024-02-03 13:37:59 +00:00
Guanpeng Xu
446a6771a6
mathematica: minor fixes
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This change includes two fixes:
1. add the directory containing dbus' libraries to LD_LIBRARY_PATH
(#284736 )
2. avoid creating conflicting `libcuda.so` in the CUDA environment
2024-02-02 23:20:29 -08:00
Markus Kowalewski
13eb3a2abe
gromacs: fix build on Darwin, add OpenMP for Darwin
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Gromacs enables OpenMP by default and fails its configure
if it can not build with OpenMP.
2024-02-02 11:02:55 +01:00
h7x4
51c3e2b494
Merge pull request #285171 from r-ryantm/auto-update/boinc
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boinc: 7.24.2 -> 7.24.3
2024-02-01 20:17:27 +01:00
Weijia Wang
a07361dd1c
Merge pull request #285382 from wegank/gplates-fix
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gplates: fix runtime error
2024-02-01 19:42:53 +01:00
markuskowa
cced9bc060
Merge pull request #285516 from markuskowa/upd-gromacs
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gromacs: 2023.3 -> 2024
2024-02-01 14:56:20 +01:00
Rolf Schröder
f835df35c7
igv: use jdk17 instead of jdk11 ( #285521 )
2024-02-01 14:42:34 +01:00
Mario Rodas
3ada8a22ba
Merge pull request #285422 from marsam/update-lean4
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lean4: 4.4.0 -> 4.5.0
2024-02-01 05:39:59 -05:00
Markus Kowalewski
e7ea94137c
gromacs: 2023.3 -> 2024
2024-02-01 10:55:43 +01:00
Mario Rodas
dbf625d8d7
Merge pull request #284969 from marsam/update-z3_4_12
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z3_4_12: 4.12.4 -> 4.12.5
2024-01-31 23:50:04 -05:00
R. Ryantm
bfb42a9bbc
seqkit: 2.6.1 -> 2.7.0
2024-02-01 04:24:02 +00:00
Mario Rodas
2c6116bd1c
lean4: add version tester
2024-02-01 04:20:00 +00:00
Mario Rodas
6a068abcfc
lean4: 4.4.0 -> 4.5.0
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Diff: https://github.com/leanprover/lean4/compare/v4.4.0...v4.5.0
Changelog: https://github.com/leanprover/lean4/blob/v4.5.0/RELEASES.md
2024-02-01 04:20:00 +00:00
Weijia Wang
fa0efec1d5
gplates: fix runtime error
2024-01-31 23:16:41 +01:00
Dmitry Kalinkin
f125235a38
root: 6.30.02 -> 6.30.04 ( #285339 )
2024-01-31 15:25:14 -05:00
Peder Bergebakken Sundt
aa10fea3ef
Merge pull request #222817 from SuperSandro2000/python-sitePackages
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treewide: replace `lib/${python.libPrefix}/site-packages` with its sh…
2024-01-31 16:34:30 +01:00
R. Ryantm
6fed14e6ac
boinc: 7.24.2 -> 7.24.3
2024-01-31 03:49:58 +00:00
Sandro Jäckel
653837881e
treewide: replace lib/${python.libPrefix}/site-packages with its shorthand ${python.sitePackages}
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which should be always preferred
2024-01-30 19:56:57 +01:00
Sandro
950c66b787
Merge pull request #284607 from dotlambda/deeptools-fix
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deeptools: fix build
2024-01-30 17:16:22 +01:00
figsoda
6446f962a1
Merge pull request #283906 from ConnorBaker/feat/egglog-unstable-2024-01-26
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egglog: unstable-2023-09-12 -> 0-unstable-2024-01-26
2024-01-30 10:01:53 -05:00
Nick Cao
1d852c8b67
Merge pull request #284834 from wegank/btor2tools-gcc-13
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btor2tools: fix build with gcc 13
2024-01-30 09:04:32 -05:00
