Commit Graph

12 Commits

Author SHA1 Message Date
Jake Gillberg
758b17a0f5 bump bioc in generate-r-packages 2021-05-06 08:47:56 -04:00
Tikhon Jelvis
70cd2cb336 r-modules: update cran and bioc packages
The last snapshot was 4 months ago (2020-08-19). I also found that I needed newer definitions when I was trying to fix the R arrow package.

This update required a couple of manual changes:

  1. Removing a few deleted packages from default.nix
  2. Renaming the "assert" package to "r_assert" in generate-r-packages.R because "assert" is a keyword in Nix
2021-01-02 15:03:06 -08:00
Justin Bedo
6bec22ee40
r-modules: bioc and cran update 2020-08-20 16:46:22 +10:00
Peter Simons
d984656a2a R: update package set
The CRAN snapshot is at "2018-07-03". Bioc is now at 3.8.
2018-07-07 12:10:46 +02:00
Justin Bedo
cfc07bcf0e
bioconductor: 3.4 -> 3.6 2018-02-21 09:58:17 +11:00
Peter Simons
f4595fa555 r-modules: drop broken irkernel package set
We can no longer update that package set since, apparently, it has moved
to a different packaging scheme.
2017-03-07 14:56:46 +01:00
Justin Bedo
4bb8727284
R: 3.2.4 -> 3.3.2 2017-02-24 15:22:12 +11:00
Jeffrey David Johnson
66bcbfb93d r-modules: update CRAN, add Bioconductor data pkgs 2016-03-22 22:50:54 -07:00
Nikolay Amiantov
287f99bada r-modules: use HTTPS, allow passing args from generated set, use MRAN 2015-11-25 11:39:28 +01:00
Asko Soukka
d8e3a981c5 r-modules: init IRkernel packages 2015-10-30 03:48:23 +02:00
Peter Simons
bb42c215e2 R: improve support for CRAN and Bioconductor package sets
- Update the instructions for re-generating each of the package set files.
 - Provide test-evaluation.nix expression to verify that the package sets evaluates.
 - Update list of known broken packages.
2015-06-17 23:19:56 +02:00
Jeffrey David Johnson
93a742fd28 R: add support for Bioconductor packages 2015-06-17 23:19:56 +02:00