Dominic Steinitz
f6e9496176
Make rPackage.sf build fixes 257221
2023-09-25 09:39:56 +01:00
Justin Bedo
6e903b7b7e
rPackages.pandoc: fix pandoc linking
2023-09-15 14:08:30 +10:00
Savyasachee Jha
953b2d706b
python310Packages.radian: 0.6.6 -> 0.6.7
2023-08-21 22:28:53 +05:30
Justin Bedo
1441d0080a
rPackages.spaMM: fix build
2023-08-14 09:20:19 +10:00
Justin Bedo
7befcff38e
rPackages.webp: fix build
2023-08-14 09:13:22 +10:00
Justin Bedo
5a0314fb3d
rPackages.ijtiff: fix build
2023-08-14 09:12:09 +10:00
Justin Bedo
11a5b1a80e
rPackages.xslt: fix build
2023-08-14 09:10:06 +10:00
Justin Bedo
7215aa7e36
rPackages.symengine: disable vendoring
2023-08-14 09:07:57 +10:00
Justin Bedo
9c648710b9
rPackages.redland: fix build
2023-08-13 13:08:37 +10:00
Justin Bedo
720895e124
rPackages: CRAN and BioC update
2023-08-11 09:12:08 +10:00
Justin Bedo
95f039acd7
rPackages.ROracle: add dependency
2023-08-04 14:37:33 +10:00
fortuneteller2k
7a1ff1ae89
rPackages.pbdZMQ: use zeromq from nixpkgs instead of vendored copy
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also fixes aarch64-darwin in the process
2023-07-04 18:27:28 +08:00
Justin Bedo
bc592fb843
rPackages.torch: fix build
2023-06-27 23:28:33 +10:00
Justin Bedo
4ef0369ff2
rPackages: CRAN and BioC update
2023-06-26 18:51:26 +10:00
Justin Bedo
f5e7c1c474
rPackages.data_table: add required pkg-config dependency
2023-06-08 09:21:23 +10:00
Justin Bedo
8ac4225a0e
rPackages.rvg: add dependency
2023-06-02 16:12:10 +10:00
Justin Bedo
63d60675b2
rPackages.rhdf5filters: update patch
2023-06-01 08:28:33 +10:00
Justin Bedo
7798454aae
rPackages: CRAN and BioC update
2023-05-30 17:51:17 +10:00
Justin Bedő
9fed7877db
Merge pull request #226447 from savyajha/radian-wrapper-fix
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radianWrapper: Explicitly set R_HOME and always have R in buildInputs
2023-04-30 08:18:09 +10:00
Savyasachee Jha
e7c6fb0f86
radianWrapper: Explicitly set R_HOME and always have R in buildInputs
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Before this commit, `wrapR = false` (the default) would lead to
situations where the `RHOME` variable would not be found. Adding `--set
R_HOME ${R}/lib/R` so that the wrapper explicitly exports `R_HOME` fixes
this issue. In addition, R is also made part of `buildInputs` by default
so that package loading works correctly.
2023-04-29 18:24:06 +05:30
Weijia Wang
19b7602cbd
rPackages.textshaping: fix build on darwin
2023-04-26 10:48:33 +03:00
Justin Bedo
0963a3a36b
rPackages: CRAN and BioC update
2023-04-06 09:11:41 +10:00
Justin Bedo
bb87f24392
rPackages: regenerate CRAN hashes
2023-04-05 13:25:07 +10:00
Justin Bedo
3e6b47a007
rPackages: switch to official CRAN mirrors
2023-04-05 13:25:06 +10:00
Justin Bedo
d8d5d73bac
rPackages.Rhdf5lib: enable cxx bindings
2023-03-24 09:47:44 +11:00
Justin Bedo
445df9ef48
rPackages.Rhdflib: patch linking flags
2023-03-23 15:19:58 +11:00
Justin Bedo
14db22f868
rPackages.rhdf5: fix build
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use nixpkgs provided hdf5 instead of vendored library
2023-03-22 09:48:06 +11:00
Justin Bedo
442e1b87d1
rPackages.rhdf5filters: fix build
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- use hdf5-blosc from nixpkgs to fix failing vendored build
- add missing build dependencies
2023-03-22 09:47:58 +11:00
Justin Bedo
ccfbc19630
rPackages.Rhdf5lib: fix build
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use nixpkgs provided hdf5 and libaec to resolve failing vendored code
2023-03-22 09:47:48 +11:00
Justin Bedo
a10887cb3f
rPackages.purrr: patch configure shebang
2023-03-16 22:10:42 +11:00
Justin Bedo
0c0c6908b9
rPackages: CRAN and BioC update
2023-03-16 21:32:06 +11:00
Sandro
46e5d1e231
Merge pull request #217517 from savyajha/radian
2023-03-10 23:11:26 +01:00
Justin Bedő
4f4a054dd2
Merge pull request #219439 from nviets/sparklyr
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rPackages: sparklyr environment variables
2023-03-08 03:52:05 +00:00
Nathan Viets
2f430da1c6
Replacing MRAN mirror with posit
2023-03-07 18:23:26 +01:00
nviets
7939447527
Update pkgs/development/r-modules/default.nix
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Co-authored-by: Justin Bedő <cu@cua0.org>
2023-03-07 11:08:38 +01:00
nviets
62821edd2e
This PR sets default SPARK_HOME and JAVA_HOME for R's sparklyr package using a patch in .onload. Preset value take precedence. SPARK_HOME points to python3Packages.pyspark rather than pkgs.spark because the former is actively maintained.
2023-03-06 12:03:04 +01:00
Savyasachee Jha
e730867dc0
python310Packages.radian: init at 0.6.4 and provide radianWrapper
2023-03-05 19:12:32 +05:30
K900
3dccc7c365
r-modules: fix eval
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Not sure how this worked before. Now it at least evals.
2023-02-24 22:45:28 +03:00
Artturin
5110d8b6fb
rPackages: s/overrideDerivation/overrideAttrs
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and attrs.NIX_CFLAGS_COMPILE to attrs.env.NIX_CFLAGS_COMPILE
https://nixos.org/manual/nixpkgs/stable/#sec-pkg-overrideDerivation
> Do not use this function in Nixpkgs as it evaluates a Derivation before modifying it, which breaks package abstraction and removes error-checking of function arguments
2023-02-23 18:45:41 +02:00
Artturin
f9fdf2d402
treewide: move NIX_CFLAGS_COMPILE to the env attrset
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with structuredAttrs lists will be bash arrays which cannot be exported
which will be a issue with some patches and some wrappers like cc-wrapper
this makes it clearer that NIX_CFLAGS_COMPILE must be a string as lists
in env cause a eval failure
2023-02-22 21:23:04 +02:00
nviets
dcd759fe65
rPackages.quarto: add quarto dependency
2023-02-17 03:25:35 +00:00
Justin Bedő
d92d0a1e54
Merge pull request #212537 from nviets/nanonext
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nng: 1.5.2 -> 1.6.0-prerelease and to rPackages.nanonext dependencies
2023-02-07 02:07:00 +00:00
Nathan Viets
67e898c12e
nng: 1.5.2 -> 1.6.0-prerelease and rPackages.nanonext dependency
2023-02-06 18:49:06 -06:00
Nathan Viets
3f5c9df651
rPackages: added libiconv to darwin builds and removed redundant package level calls
2023-02-07 09:39:53 +11:00
Chris Warburton
802527baa2
rPackages.classInt: add libiconv dependency to fix build on darwin
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Avoids 'ld: library not found for -liconv' on x86_64-darwin
2023-01-06 12:05:12 +00:00
Justin Bedo
7ed992a3fb
rPackages: CRAN and BioC update
2022-12-15 08:51:33 +11:00
Justin Bedő
e442f93a8c
Merge pull request #204684 from trofi/rPackages.devEMF-without-xlibsWrapper
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rPackages.devEMF: use xorg.* packages directly instead of xlibsWrappe…
2022-12-06 07:22:53 +00:00
Justin Bedő
43f39630df
Merge pull request #204550 from trofi/rPackages.imager-without-xlibsWrapper
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rPackages.imager: use xorg.* packages directly instead of xlibsWrappe…
2022-12-06 07:16:01 +00:00
Sergei Trofimovich
b2b5c4db0b
rPackages.Cairo: use xorg.* packages directly instead of xlibsWrapper indirection
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Validated as no change in `out` output with `diffoscope`.
2022-12-05 21:22:13 +00:00
Sergei Trofimovich
a2fbaae04a
rPackages.devEMF: use xorg.* packages directly instead of xlibsWrapper indirection
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Validated as no change in `out` output with `diffoscope`.
2022-12-05 21:16:38 +00:00
