Sandro
05c703fde0
Merge pull request #186464 from apraga/bioextalign-1.5.1
2022-10-22 00:34:42 +02:00
Alexis Praga
02ff423121
bioextalign: init at 1.5.1
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Part of BioPerl Extensions (BioPerl-Ext) distribution, a collection of Bioperl C-compiled extensions. These are no longer maintained but needed for Ensembl-VEP (annotation
for genomics).
Co-authored-by: Sandro <sandro.jaeckel@gmail.com>
2022-10-20 23:18:32 +02:00
github-actions[bot]
0ae3aa5345
Merge master into staging-next
2022-10-02 17:45:43 +00:00
Thomas Gerbet
cbc685e754
apacheHttpdPackages.mod_perl: 2.0.11 -> 2.0.12
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https://svn.apache.org/repos/asf/perl/modperl/tags/2_0_12/Changes
2022-10-02 12:06:39 +02:00
Arnout Engelen
f2772c7749
perlPackages.Po4a: make devdoc reproducible
2022-09-25 22:29:52 +02:00
Yureka
fec315a167
perlPackages.Po4a: disable tests on musl
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Void linux package have investigated the failure and tracked it down to differences in gettext behavior. They decided to disable tests.
https://github.com/void-linux/void-packages/pull/34029#issuecomment-973267880
Alpine packagers have not worried about running the tests until now:
https://git.alpinelinux.org/aports/tree/main/po4a/APKBUILD#n11
2022-09-15 20:18:00 +02:00
Yureka
b8a992605d
perlPackages.Po4a: disable TextWrapI18n dependency on musl
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This dependency is only used for formatting error message and pulls in a
dependency on glibc because it needs the /usr/bin/locale binary.
2022-09-15 20:18:00 +02:00
Janne Heß
98716fb271
perlPackages: Regenerate metadata (phase 2)
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This is the automated phase, fetching stuff from metacpan
2022-08-21 20:26:48 +02:00
Janne Heß
3d3188ba0b
perlPackages: Regenerate metadata (phase 1)
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This is required because my parser/generator is very primitive :/
2022-08-21 16:37:15 +02:00
Sandro
fe72f925f5
Merge pull request #176792 from malob/fix-buildPerlPackages-pname
2022-06-23 13:26:03 +02:00
Malo Bourgon
ba40bab6e5
perlPackages: add meta.mainProgram to pacakges with single executable
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where the executable's name differs from the packages `name` or `pname`
2022-06-07 14:53:09 -07:00
Malo Bourgon
399732b449
buildPerlPackage: don't mess with pname and phase out use of name
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Currently `buildPerlPackage` prefixes the Perl version to the package's
`pname`, which results in `nix run` not being able to work for any
packages build with it out of the box. This commit corrects that and
phases out the ability to set `name` directly, as well as refactors the
code to not require `cleanedAttrs`.
2022-06-07 12:49:23 -07:00
Malo Bourgon
61beb33b83
Revert "perlPackages: add default meta.mainProgram ( #176398 )"
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This reverts commit ff7b216dcf
2022-06-07 12:20:33 -07:00
Jonas Chevalier
ff7b216dcf
perlPackages: add default meta.mainProgram ( #176398 )
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Because perl packages are prefixed with the perl version, it means that
the `lib.getExe` heuristic will never point to the binary name. So we
provide the meta.mainProgram that overrides that, using the original
pname or parsed name. It's not perfect but should yield better results
already.
2022-06-06 14:35:07 +02:00
Artturin
1d44ac176c
treewide: add enableParallelBuilding's to bootstrap packages so hashes stay the same
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when enableParallelBuildingByDefault is enabled
verified with
`nix-diff $(nix eval ".#gcc-unwrapped.drvPath") $(nix eval --expr 'with import ./. { config = { enableParallelBuildingByDefault = true; }; }; gcc-unwrapped.drvPath' --impure)`
2022-05-25 16:03:14 +03:00
Jonathan Ringer
c36c0bdba3
perlPackages: restore meta.positoin
2022-02-10 10:50:25 -08:00
Felix Buehler
44c6f10cc6
findimagedupes: make as separate package
2022-02-06 00:11:00 +01:00
Felix Buehler
f328da45ae
findimagedupes: init at 2.19.1
2022-01-29 10:52:23 +01:00
Victor Engmark
57b496ea98
misc: Replace tab indentation with spaces
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I've tried to be consistent, using four or eight spaces to line up
with existing code.
2021-11-14 16:04:46 +13:00
Stig Palmquist
c4095d0e41
perlPackages.mod_perl2: fix build on perl-5.34.0
2021-08-13 15:16:35 +02:00
Farid Zakaria
3987b0e481
strip-nondeterminism: file to propagatedBuildInput
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`file` is used by the perl script.
```
sub _get_file_type($) {
my $file=shift;
open(FILE, '-|') # handle all filenames safely
|| exec('file', $file)
|| die "can't exec file: $!";
my $type=<FILE>;
close FILE;
return $type;
}
```
This script is very handy to run within a `nix-build` context,
specifically during the fixupPhase.
Unfortunately, file is not propagated, and does not exist causing the
build to fail. Fix it by adding it.
Co-authored-by: Jonathan Ringer <jonringer@users.noreply.github.com>
2021-06-29 20:51:50 -07:00
Vincenzo Mantova
3d385c7894
perlPackages.TextBibTeX: use lib instead of lib64 on aarch64 ( #122567 )
2021-05-15 10:04:35 +02:00
Alyssa Ross
a8afbb45c1
treewide: use lib.warnIf where appropriate
2021-04-28 21:44:21 +00:00
Stig Palmquist
8fca47fdc1
perlPackages.NetCIDRLite: 0.21 -> 0.22
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Removed patch that is now in upstream
2021-04-05 18:02:52 +02:00
Stig Palmquist
7365de5ace
perlPackages.NetCIDRLite: add patch to prevent leading zeroes in ipv4 octets
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https://blog.urth.org/2021/03/29/security-issues-in-perl-ip-address-distros/
2021-03-30 12:31:27 +02:00
Ben Siraphob
e03c068af5
treewide: makeWrapper buildInputs to nativeBuildInputs
2021-02-19 20:09:16 +07:00
Mica Semrick
310cb37f07
perlPackages.Po4a: 0.55 -> 0.62
2021-02-13 00:25:36 -08:00
Pavol Rusnak
a6ce00c50c
treewide: remove stdenv where not needed
2021-01-25 18:31:47 +01:00
Pavol Rusnak
cf2a67fef3
pkgs/development: stdenv.lib -> lib
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this takes care of the following folders in pkgs/development:
* arduino
* chez-modules
* go-packages
* guile-modules
* idris-modules
* perl-modules
* r-modules
* ruby-modules
2021-01-17 19:11:59 +01:00
Ben Siraphob
8dd78bb4fb
treewide: fix double quoted strings in meta.description
2021-01-16 11:29:30 +07:00
Profpatsch
4a7f99d55d
treewide: with stdenv.lib; in meta -> with lib;
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Part of: https://github.com/NixOS/nixpkgs/issues/108938
meta = with stdenv.lib;
is a widely used pattern. We want to slowly remove
the `stdenv.lib` indirection and encourage people
to use `lib` directly. Thus let’s start with the meta
field.
This used a rewriting script to mostly automatically
replace all occurances of this pattern, and add the
`lib` argument to the package header if it doesn’t
exist yet.
The script in its current form is available at
https://cs.tvl.fyi/depot@2f807d7f141068d2d60676a89213eaa5353ca6e0/-/blob/users/Profpatsch/nixpkgs-rewriter/default.nix
2021-01-11 10:38:22 +01:00
Frederik Rietdijk
9e1943edc0
Merge master into staging-next
2020-10-13 19:34:34 +02:00
Andreas Wiese
c5b0c0aa4e
ham: 2019-01-22 -> 2020-09-09
2020-10-13 11:39:04 +02:00
Jan Tojnar
32b4375f10
Merge branch 'staging-next' into staging
2020-09-29 00:12:29 +02:00
Frank Doepper
2ab6756314
youtube-viewer: 3.7.5 -> 3.7.9
2020-09-25 16:31:16 +02:00
volth
5481e02eba
undo efc70eb6d7
2020-09-09 09:16:24 +00:00
Ben Wolsieffer
d61f1a4a5f
perl: rename miniperl output from dev to mini
2020-08-17 13:43:42 -04:00
Stig Palmquist
e68e4ca4b0
perlPackages.CryptOpenPGP: init at 1.12
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dependencies:
perlPackages.AltCryptRSABigInt: init at 0.06
perlPackages.ConvertASCIIArmour: init at 1.4
perlPackages.CryptCAST5_PP: init at 1.04
perlPackages.CryptDES_EDE3: init at 0.01
perlPackages.CryptDSA: init at 1.17
perlPackages.CryptRIPEMD160: init at 0.06
perlPackages.CryptTwofish: init at 2.17
perlPackages.DataBuffer: init at 0.04
perlPackages.DigestMD2: init at 2.04
perlPackages.MathPrimeUtil: init at 0.73
perlPackages.MathPrimeUtilGMP: init at 0.52
perlPackages.TieEncryptedHash: init at 1.24
2020-07-24 16:12:45 +02:00
Mario Rodas
5868f8f306
strip-nondeterminism: fix build on darwin
2020-07-18 07:30:00 -05:00
Jörg Thalheim
2d357db2e8
Merge pull request #92343 from Izorkin/percona-tools
2020-07-17 20:59:55 +01:00
Stig Palmquist
a05489fb90
perlPackages.WWWCurl: fix build
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- Include patch from AUR to fix compatibility with newer libcurl.
- Fix build with clang
2020-07-16 09:35:58 +02:00
Izorkin
3fef7f3e54
perlPackages.PerconaToolkit: 3.0.12 -> 3.2.0
2020-07-05 17:56:03 +03:00
Frederik Rietdijk
c33ca7c5ce
Merge staging-next into staging
2020-07-02 17:14:53 +02:00
Federico Rampazzo
ae16459305
PerconaToolkit: use shortenPerlShebang ( #91921 )
2020-07-01 18:26:18 -04:00
volth
2020e90cc8
perlPackages.POE: patches included upstream
2020-06-20 19:48:54 +00:00
volth
efc70eb6d7
perlPackages.XMLParser: update patch
2020-06-20 19:26:22 +00:00
Jan Tojnar
b4a6714571
Merge branch 'staging-next' into staging
2020-04-13 18:54:59 +02:00
Michael Reilly
84cf00f980
treewide: Per RFC45, remove all unquoted URLs
2020-04-10 17:54:53 +01:00
Jan Tojnar
55a5c128d4
Merge branch 'staging-next' into staging
2020-04-10 12:13:27 +02:00
Alexander Tomokhov
52ad14bbee
youtube-viewer: 3.3.0 -> 3.7.5
2020-04-08 16:56:39 +03:00
