Commit Graph

9369 Commits

Author SHA1 Message Date
OTABI Tomoya
3caeeb35f2
Merge pull request #305464 from natsukium/pymol/update
pymol: 2.5.0 -> 3.0.0
2024-05-01 00:08:09 +09:00
samlich
472ce9672e
pymol: remove no longer needed disableHardening 2024-05-01 00:07:19 +09:00
natsukium
2a5ba3d551
pymol: add natsukium as maintainer 2024-05-01 00:07:18 +09:00
natsukium
f97361a613
pymol: enable tests 2024-05-01 00:07:18 +09:00
Nick Cao
83bdb045f6
Merge pull request #307843 from NickCao/seqtk
seqtk: fix cross compilation, drop custom installPhase
2024-04-30 09:30:10 -04:00
Weijia Wang
53dc0aa2d8
Merge pull request #307686 from r-ryantm/auto-update/xnec2c
xnec2c: 4.4.12 -> 4.4.16
2024-04-30 13:36:44 +02:00
éclairevoyant
0696dc350a
Merge pull request #307745 from OPNA2608/fix/stableVersion/pkgs-applications
pkgs/applications: Fix some unstableGitUpdater users
2024-04-30 11:25:40 +00:00
OPNA2608
bd6498daab eigenmath: unstable-2024-04-26 -> 0-unstable-2024-04-26 2024-04-30 06:05:47 +02:00
Nick Cao
cd5f33f23d
seqtk: fix cross compilation, drop custom installPhase 2024-04-29 17:04:29 -04:00
Aleksana
fe1729f632
Merge pull request #307454 from r-ryantm/auto-update/betaflight-configurator
betaflight-configurator: 10.9.0 -> 10.10.0
2024-04-29 21:44:17 +08:00
R. Ryantm
50cff5784b xnec2c: 4.4.12 -> 4.4.16 2024-04-29 08:18:03 +00:00
Vincent Laporte
1d9cd57ddf why3: 1.7.1 → 1.7.2 2024-04-29 10:09:25 +02:00
R. Ryantm
f2c7ecb8a4 snakemake: 8.10.7 -> 8.11.0 2024-04-28 19:43:09 -04:00
OTABI Tomoya
838a368153
Merge pull request #307399 from natsukium/mafft/update
mafft: 7.525 -> 7.526
2024-04-29 01:27:57 +09:00
Nick Cao
55f3ff8659
Merge pull request #307457 from r-ryantm/auto-update/kicad
kicad: 8.0.1 -> 8.0.2
2024-04-28 11:06:36 -04:00
R. Ryantm
42da345f48 kicad: 8.0.1 -> 8.0.2 2024-04-28 12:34:11 +00:00
R. Ryantm
a64db0a5a0 betaflight-configurator: 10.9.0 -> 10.10.0 2024-04-28 12:25:28 +00:00
R. Ryantm
24b7789f47 eigenmath: unstable-2024-04-19 -> unstable-2024-04-26 2024-04-28 10:26:18 +00:00
natsukium
ce0af18702
mafft: enable simple test 2024-04-28 13:57:47 +09:00
natsukium
4b3081c5e0
mafft: prettify 2024-04-28 13:46:23 +09:00
natsukium
5cb77278a4
mafft: 7.525 -> 7.526
Diff: https://gitlab.com/sysimm/mafft/-/compare/v7.525...v7.526
2024-04-28 13:42:08 +09:00
Pol Dellaiera
44729ccb60
Merge pull request #304066 from TomaSajt/simulide
simulide: factor out sources and format with nixfmt (no rebuilds)
2024-04-27 22:32:07 +02:00
Sébastien Maret
ef401a3702
gildas: 20230801_a -> 20240401_a; fix build on darwin (#304813)
- Use GNU's cpp instead of Apple's (see #304528)

- Use clang and clang++ on darwin-aarch64

- Update from 20230801_a -> 20240401_a

Closes #304516
2024-04-27 19:56:58 +08:00
Janik
74cc329a36
Merge pull request #306702 from marsam/goodbye
maintainers: remove marsam
2024-04-25 13:51:10 +02:00
Matthias Beyer
2da6875b98
Merge pull request #304273 from r-ryantm/auto-update/gplates
gplates: 2.4 -> 2.5
2024-04-25 10:48:11 +02:00
Yt
f2157c2a34
Merge pull request #305974 from onny/rocksdb-update
rocksdb: 8.3.2 -> 9.1.0, rocksdb_8_3: init at 8.3.2
2024-04-25 01:38:37 +00:00
Atemu
2432c6b829
Merge pull request #271071 from pbsds/wrapAppImage-pname-redux
appimageTools.wrapAppImage: remove version from `pname`
2024-04-24 21:48:19 +02:00
Peder Bergebakken Sundt
985aa8174d treewide: unbreak appimageTools.wrapType2 builds
`appimageTools.wrapType2` no longer creates a binary `$out/bin/${name}` if `pname` and `version` is provided.
Derivations that have worked around this behavior with a `mv $out/bin/{${name},${pname}}` broke as a result.
This should fix most instances.

contex: #271071
2024-04-24 15:26:52 +02:00
Mario Rodas
2becf6e837 maintainers: drop marsam 2024-04-24 04:20:00 +00:00
Tom Hubrecht
c4168ca616 sage: Fix test failure from scipy upgrade 2024-04-23 16:45:14 +02:00
R. Ryantm
03cef041d7 eigenmath: unstable-2024-04-08 -> unstable-2024-04-19 2024-04-23 05:26:42 +00:00
Peder Bergebakken Sundt
52359fe80a
Merge pull request #297196 from TomaSajt/brmodelo
brmodelo: make deterministic and clean up
2024-04-22 23:34:10 +02:00
R. Ryantm
ed91464081 python311Packages.snakemake: 8.10.6 -> 8.10.7 2024-04-22 16:11:46 -04:00
Jonas Heinrich
f7709cf1b3 treewide: switch from rocksdb -> rocksdb_8_3 2024-04-22 13:02:14 +02:00
Nikolay Korotkiy
76d43a0848
Merge pull request #305483 from wegank/nest-hash
nest: fix hash
2024-04-20 14:51:35 +04:00
Weijia Wang
5bc788216a nest: fix hash 2024-04-20 10:17:24 +02:00
natsukium
1bb46ec3c6
pymol: modernize 2024-04-20 13:46:28 +09:00
natsukium
1541a03069
pymol: 2.5.0 -> 3.0.0
Diff: https://github.com/schrodinger/pymol-open-source/compare/v2.5.0...v3.0.0
2024-04-20 13:46:27 +09:00
Mario Rodas
ebdd21f207
Merge pull request #299214 from kilianar/stellarium-24.1
stellarium: 23.4 -> 24.1
2024-04-19 22:05:15 -05:00
Vladimír Čunát
8c0c955a09
Merge branch 'master' into staging-next 2024-04-19 07:52:28 +02:00
Weijia Wang
2e5299f478
Merge pull request #303357 from r-ryantm/auto-update/iqtree
iqtree: 2.3.1 -> 2.3.2
2024-04-18 20:54:50 +02:00
github-actions[bot]
5c2b2d5b74
Merge master into staging-next 2024-04-17 18:01:04 +00:00
Aleksana
e1e418e67a
Merge pull request #304395 from r-ryantm/auto-update/bcftools
bcftools: 1.19 -> 1.20
2024-04-17 21:16:25 +08:00
github-actions[bot]
a459b363de
Merge master into staging-next 2024-04-16 12:01:11 +00:00
Weijia Wang
72e43a6c65
Merge pull request #303754 from r-ryantm/auto-update/messer-slim
messer-slim: 4.2 -> 4.2.1
2024-04-16 12:51:51 +02:00
github-actions[bot]
a34a6c51cd
Merge master into staging-next 2024-04-16 06:01:08 +00:00
R. Ryantm
1063186a66 cwltool: 3.1.20240112164112 -> 3.1.20240404144621 2024-04-15 22:31:58 -04:00
R. Ryantm
c48e90fd63 bcftools: 1.19 -> 1.20 2024-04-16 00:22:42 +00:00
github-actions[bot]
097ced11fa
Merge master into staging-next 2024-04-16 00:02:03 +00:00
Mario Rodas
706d06f722
Merge pull request #303624 from r-ryantm/auto-update/python311Packages.nest
python311Packages.nest: 3.6 -> 3.7

Closes https://github.com/NixOS/nixpkgs/pull/303637
2024-04-15 18:57:28 -05:00